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YP_009272992.1
Arc-VirNC_030884__YP_009272992.1__BHS13-gp40__00040
Identity
- Accession:
- NC_030884 ↗
- Protein ID:
- YP_009272992.1 ↗
- Kingdom:
- archaea
Quality
88.4
mean pLDDT
Taxonomy
Zilligvirae›
Taleaviricota›
Tokiviricetes›
Ligamenvirales›
Rudiviridae›
Icerudivirus›
Sulfolobus_islandicus_rudivirus_3
TaxID: 1895333
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-10_94-148
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kihC01 | 2.20.25.510 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.80 | 36.0 | 4.80e-01 | 80.6% | 79.4% |
| 3kifD00 | 2.20.25.650 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Tachylectin-2-like | 0.69 | 39.0 | 3.37e-01 | 88.7% | 38.5% |
| 1vwxk00 | 3.30.720.90 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.60 | 47.0 | 4.63e-01 | 88.7% | 88.4% |
| 2codA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 47.0 | 4.06e-01 | 87.1% | 83.3% |
| 3o9zD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 48.0 | 3.39e-01 | 88.7% | 80.4% |
| 3uuwB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 42.0 | 3.05e-01 | 79.0% | 89.7% |
| 1whnA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 50.0 | 4.32e-01 | 100.0% | 79.2% |
| 1fu1A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.57 | 45.0 | 3.75e-01 | 88.7% | 83.1% |
| 1yt3A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.57 | 43.0 | 3.12e-01 | 83.9% | 50.5% |
| 4k17B01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 45.0 | 3.75e-01 | 87.1% | 69.4% |
| 1e8oA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.57 | 44.0 | 4.25e-01 | 87.1% | 93.2% |
| 4g41A00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.57 | 42.0 | 2.89e-01 | 80.6% | 37.7% |
| 3au4A04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 45.0 | 3.95e-01 | 87.1% | 79.6% |
| 2c9oB02 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.56 | 45.0 | 3.73e-01 | 88.7% | 75.2% |
| 4a18P00 | 3.30.720.90 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.55 | 45.0 | 4.49e-01 | 91.9% | 92.4% |
| 4rzkA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 47.0 | 4.29e-01 | 98.4% | 88.5% |
| 4paaA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 46.0 | 3.07e-01 | 91.9% | 73.1% |
| 1aipA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 46.0 | 3.44e-01 | 100.0% | 96.1% |
| 1yqeA01 | 3.40.630.50 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › AF0625-like | 0.55 | 46.0 | 3.38e-01 | 98.4% | 93.5% |
| 2wtzA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.54 | 43.0 | 2.95e-01 | 90.3% | 82.5% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.54 | 41.0 | 3.52e-01 | 88.7% | 71.2% |
| 2ymsC00 | 2.40.10.480 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 42.0 | 4.03e-01 | 88.7% | 80.0% |
| 3rssA02 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 43.0 | 2.94e-01 | 98.4% | 87.6% |
| 1914A00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.53 | 41.0 | 3.11e-01 | 88.7% | 40.9% |
| 3eeiA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.53 | 40.0 | 2.80e-01 | 83.9% | 44.2% |
| 3nm6B00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.53 | 40.0 | 2.79e-01 | 83.9% | 43.7% |
| 1e8oD00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.53 | 43.0 | 4.08e-01 | 91.9% | 93.4% |
| 1cjxA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 40.0 | 3.00e-01 | 82.3% | 88.0% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.51 | 35.0 | 3.67e-01 | 83.9% | 78.9% |
| 1tg7A02 | 2.102.20.10 | Mainly Beta › 3-layer Sandwich › beta-galactosidase, domain 2 › Beta-galactosidase, domain 2 | 0.51 | 40.0 | 2.97e-01 | 88.7% | 66.9% |
| 2avtB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.50 | 41.0 | 3.00e-01 | 90.3% | 75.6% |
| 5dn8A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 37.0 | 2.84e-01 | 82.3% | 100.0% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4943214 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.64 | 52.0 | 4.99e-01 | 88.7% | 92.9% |
| 4360067 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.63 | 51.0 | 4.73e-01 | 90.3% | 84.8% |
| 5074128 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.62 | 52.0 | 5.19e-01 | 93.5% | 93.8% |
| 5048073 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.62 | 50.0 | 5.00e-01 | 90.3% | 90.8% |
| 4334411 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.62 | 52.0 | 5.14e-01 | 93.5% | 93.8% |
| 3922908 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.61 | 45.0 | 3.11e-01 | 82.3% | 47.0% |
| 4990229 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.60 | 48.0 | 4.77e-01 | 88.7% | 98.5% |
| 3216630 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 53.0 | 3.27e-01 | 100.0% | 96.0% |
| 5000351 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.59 | 33.0 | 2.45e-01 | 79.0% | 19.4% |
| 3417244 | 220.1.1.64 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII | 0.58 | 47.0 | 4.09e-01 | 88.7% | 76.8% |
| 4960280 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 43.0 | 3.80e-01 | 82.3% | 70.5% |
| 3706686 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.57 | 47.0 | 4.63e-01 | 93.5% | 86.2% |
| 4065466 | 220.1.1.150 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF986 | 0.57 | 46.0 | 4.23e-01 | 87.1% | 81.2% |
| 3586825 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 45.0 | 2.85e-01 | 88.7% | 28.0% |
| 3585591 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.56 | 46.0 | 4.08e-01 | 90.3% | 88.9% |
| 4393186 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.56 | 43.0 | 4.32e-01 | 87.1% | 90.8% |
| 3422229 | 3497.1.1.1 ↗ | beta barrels › Replication foci-targeting sequence N-terminal domain › Replication foci-targeting sequence N-terminal domain › Replication foci-targeting sequence N-terminal domain › DNMT1-RFD | 0.56 | 41.0 | 3.24e-01 | 79.0% | 70.0% |
| 4982077 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 43.0 | 3.76e-01 | 83.9% | 78.9% |
| 3221729 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.55 | 46.0 | 2.91e-01 | 98.4% | 93.8% |
| 4945118 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.55 | 46.0 | 3.19e-01 | 91.9% | 74.2% |
| None | — | 0.54 | 45.0 | 3.01e-01 | 88.7% | 97.3% | |
| 3944466 | 211.1.1.10 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase_5 | 0.54 | 41.0 | 3.09e-01 | 82.3% | 90.3% |
| 4512587 | 2011.2.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › tRNA_deacylase | 0.53 | 44.0 | 3.24e-01 | 96.8% | 93.7% |
| 4140035 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.53 | 33.0 | 2.51e-01 | 95.2% | 26.9% |
| 4112791 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.52 | 34.0 | 3.73e-01 | 85.5% | 82.0% |
| 4214812 | 4.8.1.26 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › bPH_8 | 0.52 | 42.0 | 3.76e-01 | 88.7% | 79.5% |
| 3289164 | 295.1.1.25 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF397 | 0.52 | 38.0 | 3.32e-01 | 85.5% | 68.2% |
| 4980027 | 2004.1.1.175 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA | 0.51 | 42.0 | 2.96e-01 | 98.4% | 99.1% |
| 4990278 | 7516.1.1.79 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_trans_2_3 | 0.51 | 43.0 | 2.73e-01 | 100.0% | 56.7% |
| 3950089 | 2011.2.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 | 0.50 | 43.0 | 2.84e-01 | 100.0% | 83.9% |
| 5077240 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.50 | 38.0 | 2.53e-01 | 87.1% | 38.1% |
D2
high
residues 27-92
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ge2A00 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.72 | 52.0 | 4.69e-01 | 75.8% | 88.8% |
| 4agiA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.71 | 57.0 | 3.68e-01 | 89.4% | 92.0% |
| 4mveA00 | 2.40.128.580 | Mainly Beta › Beta Barrel › Lipocalin › GXWXG domain | 0.66 | 51.0 | 3.94e-01 | 83.3% | 37.4% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 48.0 | 4.41e-01 | 80.3% | 100.0% |
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.64 | 47.0 | 4.07e-01 | 80.3% | 88.8% |
| 3nixB00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 53.0 | 3.28e-01 | 92.4% | 74.0% |
| 3el6A00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.62 | 48.0 | 3.26e-01 | 86.4% | 41.7% |
| 3pcrA01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.62 | 49.0 | 4.36e-01 | 86.4% | 62.8% |
| 3zxjA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 48.0 | 3.20e-01 | 90.9% | 77.9% |
| 1a87A01 | 3.30.1120.60 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Colicin | 0.60 | 50.0 | 4.45e-01 | 93.9% | 99.0% |
| 2r9yA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.59 | 45.0 | 3.49e-01 | 81.8% | 70.5% |
| 3g3oA00 | 3.20.100.30 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain | 0.59 | 46.0 | 3.15e-01 | 90.9% | 74.4% |
| 3oblA00 | 2.40.128.450 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 47.0 | 3.89e-01 | 93.9% | 63.6% |
| 2x5gA00 | 3.30.720.60 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.58 | 41.0 | 3.69e-01 | 74.2% | 58.2% |
| 3jcuO01 | 2.40.160.30 | Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor | 0.57 | 44.0 | 3.40e-01 | 89.4% | 68.8% |
| 1dgmA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.57 | 46.0 | 3.08e-01 | 90.9% | 54.3% |
| 3ltiA01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.57 | 42.0 | 3.13e-01 | 78.8% | 97.0% |
| 3l8kA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 47.0 | 3.83e-01 | 92.4% | 100.0% |
| 3h74A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 45.0 | 3.00e-01 | 89.4% | 39.2% |
| 3bp1A02 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.54 | 41.0 | 3.38e-01 | 86.4% | 72.2% |
| 2bvbA00 | 2.60.120.710 | Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 | 0.54 | 45.0 | 3.65e-01 | 98.5% | 83.2% |
| 3flpA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 3.26e-01 | 100.0% | 68.2% |
| 3qvsA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 40.0 | 3.52e-01 | 81.8% | 94.1% |
| 2ix2B00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.53 | 39.0 | 2.74e-01 | 81.8% | 47.3% |
| 6cxhA03 | 2.60.40.1580 | Mainly Beta › Sandwich › Immunoglobulin-like › Particulate methane monooxygenase, b subunit. Chain: A, domain 3 | 0.53 | 42.0 | 3.39e-01 | 87.9% | 83.8% |
| 1gr0A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 40.0 | 3.70e-01 | 83.3% | 88.1% |
| 2hczX02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.52 | 40.0 | 3.59e-01 | 90.9% | 81.7% |
| 3cinA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 39.0 | 3.43e-01 | 83.3% | 93.3% |
| 5iroD00 | 2.60.40.3530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 40.0 | 3.51e-01 | 84.8% | 71.6% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4013508 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.72 | 59.0 | 3.76e-01 | 90.9% | 88.5% |
| 3264341 | 5.1.4.147 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N | 0.70 | 55.0 | 3.53e-01 | 86.4% | 74.5% |
| 3638068 | 5.1.4.426 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, CAF1C_H4-bd, ANAPC4_WD40 | 0.70 | 57.0 | 3.46e-01 | 90.9% | 79.6% |
| 3554206 | 5.1.4.427 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Med16_N | 0.70 | 56.0 | 3.36e-01 | 89.4% | 78.0% |
| 4389579 | 5.1.4.100 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Med16_N | 0.69 | 55.0 | 3.35e-01 | 89.4% | 84.9% |
| 3210163 | 5.1.4.100 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Med16_N | 0.69 | 56.0 | 3.42e-01 | 90.9% | 83.6% |
| 4191828 | 5.1.4.100 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Med16_N | 0.69 | 57.0 | 3.35e-01 | 92.4% | 77.8% |
| 3824049 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.68 | 54.0 | 3.56e-01 | 87.9% | 92.9% |
| 4014123 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.68 | 55.0 | 3.61e-01 | 90.9% | 86.7% |
| 3821398 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.67 | 54.0 | 3.50e-01 | 89.4% | 90.2% |
| 3960946 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.67 | 52.0 | 3.92e-01 | 83.3% | 76.8% |
| None | — | 0.66 | 54.0 | 3.35e-01 | 89.4% | 91.7% | |
| 5038973 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.66 | 53.0 | 3.35e-01 | 89.4% | 73.1% |
| 4366777 | 5.1.5.205 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF27482 | 0.66 | 53.0 | 3.39e-01 | 92.4% | 70.7% |
| 3940470 | 5.1.4.320 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_LRRK2 | 0.65 | 51.0 | 3.19e-01 | 87.9% | 68.9% |
| 3457412 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.65 | 52.0 | 3.53e-01 | 90.9% | 78.1% |
| 3244141 | 5.1.4.320 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_LRRK2 | 0.65 | 52.0 | 3.28e-01 | 89.4% | 78.0% |
| 3627380 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 53.0 | 3.44e-01 | 92.4% | 87.1% |
| 4994722 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.64 | 55.0 | 3.49e-01 | 100.0% | 98.1% |
| 5038465 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 48.0 | 3.10e-01 | 90.9% | 90.1% |
| 5006258 | 205.1.1.128 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › APS-reductase_C | 0.61 | 46.0 | 3.63e-01 | 83.3% | 41.4% |
| 3781917 | 5.1.4.332 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29748 | 0.61 | 48.0 | 3.15e-01 | 89.4% | 41.6% |
| 4196888 | 5.1.4.327 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_MABP1-WDR62_2nd | 0.60 | 48.0 | 3.06e-01 | 92.4% | 76.8% |
| 4003315 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.60 | 47.0 | 3.04e-01 | 92.4% | 81.9% |
| 3894385 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.59 | 48.0 | 3.20e-01 | 95.5% | 89.5% |
| 3572103 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.59 | 47.0 | 3.78e-01 | 89.4% | 86.7% |
| 3958695 | 3484.1.1.2 ↗ | a+b two layers › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Glyco_hydro_64 | 0.59 | 48.0 | 3.66e-01 | 90.9% | 51.9% |
| 1270403 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.57 | 45.0 | 3.72e-01 | 87.9% | 97.6% |
| 4056618 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.56 | 43.0 | 3.49e-01 | 83.3% | 45.6% |
| 4212114 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.55 | 47.0 | 3.54e-01 | 98.5% | 94.3% |
| 1726557 | 5084.1.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › MSP | 0.53 | 40.0 | 2.83e-01 | 86.4% | 58.7% |
| 4955091 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.51 | 42.0 | 3.01e-01 | 98.5% | 55.0% |