←Back to structures
NC_030915.1__YP_009274233.1__BH761_gp006__00006
Bact-VirNC_030915.1__YP_009274233.1__BH761_gp006__00006
Identity
- Accession:
- NC_030915 ↗
- Kingdom:
- phage
Quality
78.0
mean pLDDT
Taxonomy
TaxID: 1838075
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-40
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5y9sC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 54.0 | 4.17e-01 | 100.0% | 37.8% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 48.0 | 3.99e-01 | 100.0% | 44.8% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 46.0 | 3.82e-01 | 91.4% | 84.3% |
| 3cdlA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 46.0 | 4.10e-01 | 100.0% | 61.1% |
| 2r0bA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.58 | 46.0 | 3.17e-01 | 100.0% | 78.8% |
| 2qibB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 44.0 | 2.87e-01 | 91.4% | 21.2% |
| 3frqB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 44.0 | 2.89e-01 | 100.0% | 31.0% |
| 1vqrD00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.54 | 45.0 | 2.74e-01 | 100.0% | 68.4% |
| 3dv9A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.52 | 43.0 | 3.58e-01 | 100.0% | 64.3% |
| 1pk1B00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.52 | 39.0 | 3.30e-01 | 88.6% | 48.6% |
| 1fuiA02 | 3.40.275.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fucose Isomerase; Chain A, domain 2 › L-fucose Isomerase; Chain A, domain 2 | 0.52 | 36.0 | 2.51e-01 | 85.7% | 89.1% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.76 | 58.0 | 4.27e-01 | 88.6% | 35.4% | |
| 3303282 | 101.1.1.267 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF26138 | 0.75 | 58.0 | 4.25e-01 | 88.6% | 35.7% |
| 4363165 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 58.0 | 4.87e-01 | 94.3% | 92.3% |
| 3379506 | 243.3.1.62 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PF26138 | 0.72 | 56.0 | 4.07e-01 | 88.6% | 31.7% |
| 4963527 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.69 | 51.0 | 3.79e-01 | 100.0% | 30.5% |
| 3448782 | 101.1.1.267 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF26138 | 0.68 | 54.0 | 4.04e-01 | 97.1% | 35.0% |
| 4984317 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.67 | 50.0 | 4.43e-01 | 100.0% | 54.5% |
| 3432588 | 101.1.3.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 | 0.67 | 55.0 | 4.16e-01 | 100.0% | 37.6% |
| 3386729 | 101.1.2.142 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 | 0.66 | 51.0 | 4.24e-01 | 100.0% | 47.1% |
| 5045332 | 101.1.2.294 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF742 | 0.66 | 50.0 | 4.24e-01 | 100.0% | 50.0% |
| 4395481 | 7564.1.1.1 ↗ | a/b three-layered sandwiches › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Flavoprotein | 0.65 | 50.0 | 3.24e-01 | 88.6% | 28.9% |
| 3880013 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.64 | 50.0 | 3.95e-01 | 100.0% | 82.2% |
| 3569412 | 101.1.10.30 ↗ | alpha arrays › HTH › HTH › Cyclin-like › DDE_Tnp_4 | 0.64 | 50.0 | 3.54e-01 | 100.0% | 56.9% |
| 4944172 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 46.0 | 3.75e-01 | 100.0% | 40.0% |
| 3287535 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.62 | 46.0 | 4.67e-01 | 100.0% | 85.7% |
| 3166296 | 2004.1.1.417 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21 | 0.61 | 49.0 | 2.99e-01 | 100.0% | 84.9% |
| 3969657 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.61 | 49.0 | 4.01e-01 | 100.0% | 77.3% |
| None | — | 0.59 | 47.0 | 2.78e-01 | 91.4% | 12.5% | |
| 4932279 | 102.1.1.3 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH | 0.58 | 42.0 | 3.85e-01 | 91.4% | 72.7% |
| 140299 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.58 | 47.0 | 3.84e-01 | 100.0% | 71.2% |
| 4340567 | 2003.2.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Molybdopterin | 0.57 | 47.0 | 2.71e-01 | 100.0% | 18.4% |
| 5019194 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.57 | 43.0 | 3.87e-01 | 88.6% | 96.4% |
| 4475404 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.56 | 40.0 | 3.53e-01 | 91.4% | 62.9% |
| 5042936 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 47.0 | 3.94e-01 | 100.0% | 64.6% |
| 5018786 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.52 | 42.0 | 3.77e-01 | 100.0% | 65.5% |