←Back to structures
NC_030915.1__YP_009274239.1__BH761_gp012__00012
Bact-VirNC_030915.1__YP_009274239.1__BH761_gp012__00012
Identity
- Accession:
- NC_030915 ↗
- Kingdom:
- phage
Quality
86.4
mean pLDDT
Taxonomy
TaxID: 1838075
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-60
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b9dB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.70 | 48.0 | 3.89e-01 | 72.9% | 77.4% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.70 | 58.0 | 4.97e-01 | 95.8% | 63.7% |
| 1t92A01 | 3.30.700.10 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin | 0.66 | 44.0 | 3.55e-01 | 70.8% | 66.7% |
| 3ed4A02 | 3.30.1120.10 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.65 | 56.0 | 4.72e-01 | 100.0% | 62.7% |
| 3eb8B01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.64 | 57.0 | 5.31e-01 | 100.0% | 80.3% |
| 6qp9B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 49.0 | 2.87e-01 | 85.4% | 22.1% |
| 1r57A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 48.0 | 3.78e-01 | 83.3% | 40.2% |
| 3s8zA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.61 | 51.0 | 3.12e-01 | 95.8% | 63.6% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 49.0 | 2.95e-01 | 91.7% | 24.7% |
| 4lqzA00 | 2.40.128.570 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4909 | 0.60 | 49.0 | 3.61e-01 | 91.7% | 56.5% |
| 2b1xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 51.0 | 3.54e-01 | 100.0% | 89.2% |
| 1shyB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 44.0 | 2.58e-01 | 85.4% | 88.2% |
| 3rfoA02 | 3.10.25.10 | Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › Formyl transferase, C-terminal domain | 0.57 | 39.0 | 3.14e-01 | 72.9% | 38.1% |
| 3nvoA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.57 | 42.0 | 3.15e-01 | 91.7% | 29.0% |
| 4nozB01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.57 | 41.0 | 4.06e-01 | 83.3% | 72.2% |
| 3bpqD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.57 | 44.0 | 3.71e-01 | 93.8% | 48.8% |
| 5cemA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 46.0 | 4.07e-01 | 93.8% | 98.6% |
| 2mm0A00 | 2.10.70.110 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.57 | 40.0 | 3.66e-01 | 72.9% | 56.2% |
| 5xpyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 46.0 | 3.56e-01 | 91.7% | 57.4% |
| 2y9fA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.56 | 47.0 | 3.33e-01 | 95.8% | 95.3% |
| 3ho6B00 | 3.40.50.11050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain | 0.52 | 43.0 | 2.85e-01 | 100.0% | 79.9% |
| 2cofA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 42.0 | 3.30e-01 | 93.8% | 65.4% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3894678 | 633.23.1.3 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › L_HMGIC_fpl | 0.73 | 56.0 | 3.61e-01 | 91.7% | 18.6% |
| 4817067 | 5.1.4.323 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR75_1st | 0.70 | 53.0 | 3.62e-01 | 83.3% | 23.4% |
| 1291143 | 9.1.1.17 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF | 0.70 | 60.0 | 4.33e-01 | 100.0% | 48.6% |
| 3421076 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.70 | 53.0 | 3.25e-01 | 83.3% | 15.7% |
| 6667 | 4221.1.1.1 ↗ | a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like › DUF1797 | 0.70 | 58.0 | 5.01e-01 | 95.8% | 65.4% |
| 5033222 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.68 | 43.0 | 3.39e-01 | 75.0% | 29.5% |
| 3598496 | 10.15.1.1 ↗ | beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like › DUF1935 | 0.67 | 51.0 | 3.98e-01 | 85.4% | 71.8% |
| 4023386 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 50.0 | 3.19e-01 | 85.4% | 16.2% |
| 4992030 | 632.1.1.40 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › DUF3536 | 0.67 | 51.0 | 3.39e-01 | 95.8% | 20.0% |
| 3684031 | 7512.1.1.1 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT | 0.67 | 50.0 | 3.21e-01 | 85.4% | 52.8% |
| 3243842 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 42.0 | 3.25e-01 | 70.8% | 28.2% |
| 3179431 | 5.1.4.362 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_VPS8 | 0.65 | 57.0 | 3.46e-01 | 97.9% | 38.3% |
| 4959983 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 50.0 | 4.85e-01 | 85.4% | 83.6% |
| 1148074 | 3400.1.1.1 ↗ | a+b complex topology › Membrane-associated protein VP24 › Membrane-associated protein VP24 › Membrane-associated protein VP24 › Filo_VP24 | 0.65 | 56.0 | 3.56e-01 | 95.8% | 48.2% |
| 3614189 | 5.1.4.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Coatomer_WDAD | 0.64 | 56.0 | 3.45e-01 | 97.9% | 28.5% |
| 3672926 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.63 | 51.0 | 3.30e-01 | 89.6% | 24.0% |
| 4024840 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.63 | 47.0 | 3.53e-01 | 85.4% | 65.9% |
| 3583988 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.62 | 50.0 | 3.91e-01 | 91.7% | 65.5% |
| 5056976 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 52.0 | 4.13e-01 | 95.8% | 55.0% |
| 3274859 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.61 | 53.0 | 3.10e-01 | 100.0% | 40.9% |
| 3598680 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 51.0 | 3.25e-01 | 100.0% | 41.9% |
| 3591016 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.60 | 44.0 | 3.88e-01 | 81.2% | 60.0% |
| 2875897 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.59 | 45.0 | 2.53e-01 | 87.5% | 19.9% |
| 4944397 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 41.0 | 4.05e-01 | 72.9% | 76.0% |
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.59 | 49.0 | 4.40e-01 | 91.7% | 73.8% |
| 1099437 | 3180.1.1.1 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › EspG | 0.58 | 45.0 | 4.04e-01 | 93.8% | 60.0% |
| 3224618 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 50.0 | 2.99e-01 | 97.9% | 20.0% |
| 3263503 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.57 | 42.0 | 3.73e-01 | 100.0% | 53.3% |
| 3517350 | 5.1.5.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N | 0.56 | 48.0 | 2.93e-01 | 100.0% | 39.1% |
| 5056706 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 41.0 | 4.06e-01 | 89.6% | 78.0% |
| 3623430 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.55 | 46.0 | 3.25e-01 | 97.9% | 95.6% |
| 5002449 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 41.0 | 4.01e-01 | 91.7% | 76.4% |
| 3624994 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 43.0 | 2.75e-01 | 100.0% | 28.6% |
| 3906073 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 42.0 | 3.37e-01 | 91.7% | 67.6% |
| 5051764 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.53 | 45.0 | 3.21e-01 | 100.0% | 74.8% |
| 4989457 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 36.0 | 3.56e-01 | 72.9% | 80.0% |