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NC_030915.1__YP_009274244.1__BH761_gp017__00017
Bact-VirNC_030915.1__YP_009274244.1__BH761_gp017__00017
Identity
- Accession:
- NC_030915 ↗
- Kingdom:
- phage
Quality
80.0
mean pLDDT
Taxonomy
TaxID: 1838075
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-107
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2z1qB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.64 | 45.0 | 4.14e-01 | 73.5% | 70.6% |
| 1sj8A02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.63 | 46.0 | 4.37e-01 | 76.5% | 80.3% |
| 4kw3A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.61 | 52.0 | 3.89e-01 | 94.1% | 60.2% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.61 | 55.0 | 3.66e-01 | 100.0% | 92.3% |
| 7drjB01 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.60 | 51.0 | 4.23e-01 | 93.1% | 80.3% |
| 2hfiA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.58 | 39.0 | 3.70e-01 | 76.5% | 57.7% |
| 3vkgA08 | 1.10.472.130 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain | 0.57 | 50.0 | 4.35e-01 | 99.0% | 73.8% |
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 33.0 | 3.69e-01 | 81.4% | 74.4% |
| 1yq3C02 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.56 | 39.0 | 3.90e-01 | 72.5% | 96.3% |
| 4od4A02 | 1.20.120.1780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UbiA prenyltransferase | 0.56 | 39.0 | 3.75e-01 | 89.2% | 62.2% |
| 5af7B03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.55 | 49.0 | 4.35e-01 | 98.0% | 83.8% |
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.55 | 43.0 | 4.03e-01 | 89.2% | 68.0% |
| 1fc3B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 40.0 | 4.06e-01 | 83.3% | 77.2% |
| 1ungE00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 42.0 | 3.77e-01 | 97.1% | 57.1% |
| 2ozbE02 | 1.10.246.90 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Nop domain | 0.54 | 42.0 | 4.23e-01 | 87.3% | 80.4% |
| 1ivhA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 47.0 | 4.30e-01 | 98.0% | 83.7% |
| 1rp3A01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.54 | 40.0 | 4.31e-01 | 92.2% | 95.3% |
| 3p4tA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 47.0 | 4.17e-01 | 98.0% | 79.3% |
| 1gcvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 42.0 | 3.84e-01 | 85.3% | 62.9% |
| 7ae2A01 | 1.20.120.580 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like | 0.53 | 43.0 | 3.93e-01 | 88.2% | 78.1% |
| 3c2bA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 42.0 | 3.81e-01 | 90.2% | 70.7% |
| 1gcvB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 41.0 | 3.78e-01 | 86.3% | 89.7% |
| 4hl4A01 | 1.10.8.1310 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.52 | 35.0 | 3.19e-01 | 97.1% | 48.6% |
| 6nsjA00 | 1.25.40.600 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › AmiS/UreI transporter | 0.51 | 40.0 | 3.34e-01 | 89.2% | 47.3% |
| 3bxjB03 | 1.10.506.10 | Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 | 0.50 | 36.0 | 2.89e-01 | 74.5% | 50.2% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3968650 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.69 | 48.0 | 4.77e-01 | 71.6% | 72.4% |
| 3663989 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.67 | 49.0 | 4.49e-01 | 76.5% | 58.5% |
| 4148010 | 632.1.1.24 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › DAGK_prokar | 0.66 | 52.0 | 4.85e-01 | 84.3% | 80.0% |
| 3804215 | 1025.1.1.0 ↗ | alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain | 0.63 | 44.0 | 4.48e-01 | 72.5% | 76.0% |
| 4241645 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.60 | 41.0 | 4.35e-01 | 73.5% | 80.0% |
| 3691242 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.60 | 44.0 | 3.48e-01 | 76.5% | 63.9% |
| 3612019 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.59 | 43.0 | 4.54e-01 | 76.5% | 87.8% |
| 3765 | 601.26.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › YppE-like › YppE-like › DUF1798 | 0.58 | 45.0 | 4.27e-01 | 89.2% | 69.2% |
| 3374493 | 5069.1.3.69 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › ETR1_N | 0.58 | 45.0 | 4.69e-01 | 89.2% | 88.4% |
| 3207635 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.57 | 41.0 | 3.56e-01 | 76.5% | 52.5% |
| 3361553 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.56 | 39.0 | 4.21e-01 | 93.1% | 84.7% |
| 3284352 | 4953.1.1.27 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › DUF3054 | 0.56 | 45.0 | 4.30e-01 | 87.3% | 81.7% |
| 4021482 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.55 | 45.0 | 3.04e-01 | 90.2% | 70.8% |
| 3518177 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.54 | 44.0 | 3.71e-01 | 89.2% | 64.0% |
| 5024816 | 5051.1.1.2 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease | 0.54 | 47.0 | 3.09e-01 | 99.0% | 86.2% |
| 5031295 | 601.7.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like | 0.53 | 43.0 | 3.92e-01 | 89.2% | 75.7% |
| 3470557 | 193.1.1.1 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH | 0.51 | 36.0 | 3.52e-01 | 93.1% | 65.2% |
| 4358643 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.51 | 37.0 | 2.90e-01 | 75.5% | 38.2% |
| 3306338 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.51 | 37.0 | 2.72e-01 | 81.4% | 28.7% |
| 3589835 | 5069.1.3.26 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › DUF1622 | 0.50 | 42.0 | 4.12e-01 | 90.2% | 90.9% |
| 3221554 | 4218.1.1.1 ↗ | alpha bundles › TAFH domain-like › TAFH domain-like › TAFH domain-like › TAFH | 0.50 | 33.0 | 3.48e-01 | 99.0% | 71.6% |