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NC_030920.1__YP_009274713.1__BH780_gp006__00006
Bact-VirNC_030920.1__YP_009274713.1__BH780_gp006__00006
Identity
- Accession:
- NC_030920 ↗
- Kingdom:
- phage
Quality
68.9
mean pLDDT
Taxonomy
TaxID: 1776293
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-80
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1srqA01 | 3.30.1120.160 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.69 | 49.0 | 4.07e-01 | 74.7% | 45.7% |
| 3c1aA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.65 | 52.0 | 4.20e-01 | 84.8% | 87.6% |
| 2wozA00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.64 | 47.0 | 3.14e-01 | 77.2% | 37.1% |
| 8aa0E01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.64 | 55.0 | 3.78e-01 | 98.7% | 52.6% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.63 | 45.0 | 3.89e-01 | 74.7% | 62.9% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.63 | 47.0 | 3.05e-01 | 79.7% | 53.4% |
| 2wzoA01 | 3.30.160.360 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 45.0 | 3.79e-01 | 75.9% | 62.4% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.61 | 44.0 | 3.76e-01 | 75.9% | 73.6% |
| 2bolB02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 43.0 | 3.69e-01 | 74.7% | 79.7% |
| 3qc2B00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 51.0 | 3.41e-01 | 100.0% | 56.6% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.59 | 44.0 | 3.68e-01 | 79.7% | 80.7% |
| 4g56D00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 44.0 | 3.00e-01 | 82.3% | 28.1% |
| 4dm5A00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.57 | 39.0 | 3.78e-01 | 70.9% | 63.2% |
| 1m2xA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.57 | 41.0 | 3.00e-01 | 75.9% | 95.0% |
| 4n4bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 48.0 | 3.31e-01 | 98.7% | 45.1% |
| 3sreA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.57 | 50.0 | 3.34e-01 | 100.0% | 52.0% |
| 1q47A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 47.0 | 2.99e-01 | 100.0% | 36.2% |
| 3f2bA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 39.0 | 3.74e-01 | 75.9% | 68.8% |
| 1f2uA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 46.0 | 3.81e-01 | 94.9% | 83.2% |
| 1e69A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 47.0 | 3.24e-01 | 94.9% | 41.1% |
| 1mdcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 42.0 | 3.58e-01 | 88.6% | 50.4% |
| 8ciwA02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.54 | 42.0 | 3.62e-01 | 86.1% | 97.7% |
| 2jobA00 | 3.30.160.320 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 37.0 | 3.50e-01 | 78.5% | 56.9% |
| 4lqzA00 | 2.40.128.570 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4909 | 0.52 | 41.0 | 3.60e-01 | 89.9% | 100.0% |
| 3k1lA01 | 3.30.457.40 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.52 | 45.0 | 4.32e-01 | 100.0% | 95.7% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.52 | 44.0 | 4.20e-01 | 100.0% | 93.9% |
| 4azpA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 42.0 | 3.54e-01 | 88.6% | 61.9% |
| 1a1xA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.52 | 42.0 | 3.84e-01 | 89.9% | 74.5% |
| 1xkiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 40.0 | 3.52e-01 | 88.6% | 57.8% |
| 4ao8A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 41.0 | 2.97e-01 | 88.6% | 51.3% |
| 1s1dA00 | 2.120.10.100 | Mainly Beta › 6 Propeller › Neuraminidase › Apyrase | 0.51 | 43.0 | 2.97e-01 | 100.0% | 59.9% |
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 38.0 | 3.26e-01 | 86.1% | 49.2% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.50 | 44.0 | 3.64e-01 | 100.0% | 78.8% |
| 3tavA00 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.50 | 40.0 | 2.90e-01 | 91.1% | 83.3% |
| 1ko2A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.50 | 43.0 | 3.17e-01 | 100.0% | 59.6% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3796352 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.70 | 49.0 | 5.37e-01 | 73.4% | 96.9% |
| 4054900 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.68 | 48.0 | 3.87e-01 | 74.7% | 56.1% |
| 3459798 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.68 | 50.0 | 3.22e-01 | 78.5% | 39.2% |
| 3517323 | 3131.1.1.2 ↗ | a+b two layers › FYR domain › FYR domain › FYR domain › FYRN | 0.67 | 48.0 | 4.25e-01 | 74.7% | 88.2% |
| 2126123 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.65 | 52.0 | 3.90e-01 | 84.8% | 68.6% |
| 3676609 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.65 | 44.0 | 2.97e-01 | 70.9% | 32.8% |
| 3194649 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.64 | 47.0 | 2.81e-01 | 78.5% | 45.2% |
| 3465186 | 5.1.8.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 | 0.64 | 46.0 | 3.88e-01 | 75.9% | 76.9% |
| None | — | 0.63 | 48.0 | 3.08e-01 | 79.7% | 31.8% | |
| 3595257 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.62 | 53.0 | 3.67e-01 | 100.0% | 71.9% |
| 4010689 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.62 | 47.0 | 4.31e-01 | 82.3% | 63.0% |
| 4939450 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.60 | 44.0 | 4.10e-01 | 78.5% | 63.0% |
| 3924601 | 5.1.5.18 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Vps16_N | 0.60 | 43.0 | 2.89e-01 | 77.2% | 24.0% |
| 3929256 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.59 | 45.0 | 3.73e-01 | 81.0% | 77.1% |
| 5069442 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.59 | 51.0 | 3.51e-01 | 97.5% | 54.8% |
| 3706741 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.59 | 51.0 | 3.67e-01 | 100.0% | 69.8% |
| 5083405 | 5.1.2.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_130 | 0.59 | 50.0 | 3.28e-01 | 100.0% | 48.0% |
| 4646256 | 2004.1.1.997 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15, AAA_23, AAA_27 | 0.58 | 50.0 | 3.02e-01 | 96.2% | 87.9% |
| 5008718 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.58 | 50.0 | 3.11e-01 | 96.2% | 84.3% |
| 5048444 | 5.1.4.143 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF6454 | 0.58 | 49.0 | 3.60e-01 | 100.0% | 61.2% |
| 5058595 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 49.0 | 3.30e-01 | 100.0% | 47.0% |
| 4947855 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 48.0 | 3.08e-01 | 100.0% | 38.9% |
| 3904209 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 42.0 | 2.85e-01 | 81.0% | 33.7% |
| 3703043 | 5.1.4.597 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR_3 | 0.56 | 48.0 | 3.34e-01 | 100.0% | 39.0% |
| 3638957 | 3561.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Med17 | 0.56 | 47.0 | 2.89e-01 | 96.2% | 19.3% |
| 3576726 | 5.1.2.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Apyrase | 0.56 | 48.0 | 3.05e-01 | 100.0% | 26.8% |
| 5027940 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.56 | 50.0 | 3.86e-01 | 98.7% | 77.1% |
| 5044101 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.55 | 48.0 | 3.72e-01 | 98.7% | 75.6% |
| 2798521 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.55 | 41.0 | 2.85e-01 | 82.3% | 34.5% |
| 4939146 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 46.0 | 3.11e-01 | 100.0% | 57.7% |
| 4978676 | 295.1.1.1 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 | 0.54 | 41.0 | 4.11e-01 | 82.3% | 85.0% |
| 3509892 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.53 | 47.0 | 3.66e-01 | 98.7% | 79.4% |
| 4994698 | 4041.1.1.0 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase | 0.53 | 46.0 | 3.53e-01 | 98.7% | 71.3% |
| 3306595 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.53 | 46.0 | 3.57e-01 | 96.2% | 77.1% |
| 3592763 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.53 | 47.0 | 3.55e-01 | 98.7% | 75.3% |
| 3942438 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.53 | 45.0 | 4.05e-01 | 94.9% | 96.4% |
| 5024450 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 39.0 | 3.30e-01 | 84.8% | 46.7% |
| 383967 | 216.1.1.7 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › FANCL_d1 | 0.53 | 45.0 | 4.35e-01 | 98.7% | 96.7% |
| 4268775 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.52 | 43.0 | 3.77e-01 | 93.7% | 88.0% |
| 3171541 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.52 | 44.0 | 3.74e-01 | 93.7% | 93.8% |
| 4028525 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.52 | 46.0 | 3.49e-01 | 98.7% | 78.4% |
| 3941378 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.52 | 36.0 | 3.39e-01 | 72.2% | 76.8% |
| 4445317 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.51 | 42.0 | 3.41e-01 | 91.1% | 51.0% |
| 3626785 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.51 | 45.0 | 3.48e-01 | 98.7% | 78.9% |
| 3935172 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.51 | 45.0 | 3.68e-01 | 98.7% | 82.8% |
| 4583096 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.51 | 44.0 | 3.21e-01 | 100.0% | 52.8% |
| 2756357 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.50 | 43.0 | 3.15e-01 | 94.9% | 45.8% |
D2
high
residues 100-158