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NC_030941.1__YP_009276507.1__BH767_gp48__00048
Bact-VirNC_030941.1__YP_009276507.1__BH767_gp48__00048
Identity
- Accession:
- NC_030941 ↗
- Kingdom:
- phage
Quality
89.2
mean pLDDT
Taxonomy
TaxID: 1838066
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 58-156
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2d1lA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.78 | 53.0 | 3.86e-01 | 70.7% | 69.1% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.76 | 47.0 | 5.56e-01 | 72.7% | 91.0% |
| 3whjA00 | 6.10.140.1710 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 51.0 | 4.91e-01 | 75.8% | 62.2% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.74 | 49.0 | 5.49e-01 | 73.7% | 88.0% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.73 | 53.0 | 5.63e-01 | 74.7% | 90.7% |
| 3ofnY00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.72 | 51.0 | 4.81e-01 | 72.7% | 80.9% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.72 | 52.0 | 5.60e-01 | 75.8% | 89.5% |
| 4ceiA03 | 6.10.250.2380 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.72 | 51.0 | 4.91e-01 | 73.7% | 99.1% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 54.0 | 5.42e-01 | 79.8% | 90.2% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.71 | 62.0 | 5.53e-01 | 98.0% | 72.7% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.70 | 56.0 | 5.30e-01 | 84.8% | 78.0% |
| 1uurA01 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.70 | 51.0 | 4.92e-01 | 75.8% | 71.8% |
| 4qgpB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.69 | 61.0 | 5.92e-01 | 97.0% | 86.0% |
| 1t72A01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.69 | 49.0 | 4.64e-01 | 75.8% | 62.4% |
| 2q5zB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.68 | 53.0 | 5.41e-01 | 97.0% | 86.2% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.67 | 60.0 | 5.74e-01 | 96.0% | 83.2% |
| 3qweA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.67 | 49.0 | 3.53e-01 | 75.8% | 45.4% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.67 | 52.0 | 5.07e-01 | 82.8% | 88.2% |
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.66 | 47.0 | 4.30e-01 | 72.7% | 97.6% |
| 1w9rA00 | 1.20.58.440 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › choline binding protein A | 0.65 | 47.0 | 4.40e-01 | 76.8% | 62.2% |
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.65 | 46.0 | 5.18e-01 | 74.7% | 98.6% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.65 | 46.0 | 4.51e-01 | 75.8% | 68.2% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.64 | 45.0 | 4.93e-01 | 72.7% | 98.7% |
| 2gl2B00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 46.0 | 4.45e-01 | 74.7% | 68.8% |
| 4dk4B00 | 1.10.4010.10 | Mainly Alpha › Orthogonal Bundle › all-alpha NTP pyrophosphatase fold › Type II deoxyuridine triphosphatase | 0.63 | 49.0 | 3.68e-01 | 79.8% | 47.9% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.63 | 45.0 | 4.81e-01 | 74.7% | 85.9% |
| 4fwvA02 | 1.20.120.1680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.63 | 45.0 | 4.12e-01 | 75.8% | 86.6% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.63 | 46.0 | 4.78e-01 | 75.8% | 80.6% |
| 3pe0A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 44.0 | 4.37e-01 | 75.8% | 68.9% |
| 1r0dA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.62 | 46.0 | 3.72e-01 | 77.8% | 45.6% |
| 4p3fA00 | 1.10.3450.40 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain | 0.61 | 50.0 | 4.05e-01 | 89.9% | 89.1% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.60 | 47.0 | 4.44e-01 | 81.8% | 86.3% |
| 3udcA01 | 1.10.287.1260 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 41.0 | 3.93e-01 | 70.7% | 67.0% |
| 3ibvB00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.59 | 51.0 | 2.99e-01 | 97.0% | 18.2% |
| 3nnrA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 45.0 | 3.55e-01 | 83.8% | 45.0% |
| 4ikhA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 46.0 | 4.30e-01 | 88.9% | 97.6% |
| 2yayA02 | 1.20.1670.10 | Mainly Alpha › Up-down Bundle › all-alpha NTP pyrophosphatase › Type II deoxyuridine triphosphatase | 0.57 | 42.0 | 3.85e-01 | 77.8% | 57.0% |
| 3llwD00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.57 | 46.0 | 3.33e-01 | 87.9% | 79.6% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 42.0 | 3.97e-01 | 79.8% | 75.8% |
| 3rx6A00 | 1.20.58.1090 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phage polarity suppression protein monomer | 0.54 | 42.0 | 3.45e-01 | 84.8% | 87.2% |
| 1ux5A03 | 1.20.58.2220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Formin, FH2 domain | 0.52 | 41.0 | 3.10e-01 | 84.8% | 72.0% |
| 3fhnA04 | 1.20.58.670 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D | 0.51 | 39.0 | 3.63e-01 | 81.8% | 95.4% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3608012 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.79 | 50.0 | 5.37e-01 | 72.7% | 74.1% |
| 4973175 | 159.1.2.33 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › dUTPase_2 | 0.79 | 72.0 | 6.82e-01 | 96.0% | 87.8% |
| 3477880 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.76 | 52.0 | 3.64e-01 | 70.7% | 24.1% |
| 3576467 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.74 | 51.0 | 3.54e-01 | 70.7% | 67.2% |
| 3769852 | 7515.1.1.4 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase,Sulfatase_C | 0.73 | 54.0 | 3.26e-01 | 75.8% | 23.8% |
| 3653773 | 605.1.1.231 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › PF28573 | 0.72 | 48.0 | 4.90e-01 | 72.7% | 70.5% |
| 5004982 | 192.8.1.481 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › PsiE | 0.72 | 52.0 | 4.76e-01 | 74.7% | 61.6% |
| 4024007 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.71 | 50.0 | 4.14e-01 | 72.7% | 63.6% |
| 4988997 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.71 | 50.0 | 4.06e-01 | 73.7% | 61.7% |
| 3548233 | 174.1.1.43 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 | 0.70 | 51.0 | 4.27e-01 | 75.8% | 52.7% |
| 3892397 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.69 | 51.0 | 3.52e-01 | 75.8% | 74.9% |
| 3252533 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.69 | 49.0 | 3.76e-01 | 73.7% | 35.8% |
| 3719527 | 2486.1.1.11 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_2 | 0.69 | 57.0 | 3.49e-01 | 88.9% | 74.1% |
| 4185385 | 605.2.1.6 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Val_tRNA-synt_C | 0.68 | 45.0 | 5.14e-01 | 73.7% | 95.7% |
| 3394875 | 109.4.1.102 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › WAPL | 0.68 | 55.0 | 3.43e-01 | 86.9% | 35.1% |
| 3952598 | 150.7.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PE › PE | 0.67 | 46.0 | 4.85e-01 | 75.8% | 77.8% |
| 3416952 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.67 | 46.0 | 4.16e-01 | 74.7% | 52.6% |
| 3549590 | 3755.3.1.123 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Tektin | 0.67 | 49.0 | 3.31e-01 | 75.8% | 85.1% |
| 3235794 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.66 | 47.0 | 4.18e-01 | 73.7% | 53.6% |
| 3514909 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 48.0 | 3.34e-01 | 75.8% | 36.6% |
| 1885522 | 3834.1.1.1 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA_TcB_BD | 0.65 | 52.0 | 3.46e-01 | 83.8% | 79.7% |
| 3255232 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.64 | 45.0 | 3.34e-01 | 72.7% | 31.6% |
| 3783375 | 1065.1.1.1 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain › SPX | 0.63 | 50.0 | 3.92e-01 | 84.8% | 81.4% |
| 3212004 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.63 | 48.0 | 4.02e-01 | 81.8% | 56.5% |
| 4156067 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.62 | 50.0 | 4.80e-01 | 84.8% | 80.0% |
| 3855880 | 622.4.1.19 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › CD20 | 0.61 | 44.0 | 4.35e-01 | 75.8% | 73.3% |
| 3440537 | 109.4.1.91 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec10_HB | 0.61 | 51.0 | 3.76e-01 | 92.9% | 68.5% |
| 4000262 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.58 | 41.0 | 4.31e-01 | 74.7% | 92.2% |
| 2324035 | 601.7.1.40 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Cas13a_C | 0.57 | 46.0 | 3.32e-01 | 86.9% | 74.9% |
| 3680604 | 246.3.1.17 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › PF27823 | 0.57 | 46.0 | 3.35e-01 | 88.9% | 73.3% |
| 3709492 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.55 | 45.0 | 4.30e-01 | 89.9% | 91.7% |