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NC_030944.1__YP_009276741.1__BH766_gp30__00030
Bact-VirNC_030944.1__YP_009276741.1__BH766_gp30__00030
Identity
- Accession:
- NC_030944 ↗
- Kingdom:
- phage
Quality
81.2
mean pLDDT
Taxonomy
TaxID: 1838067
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-53
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ck2A00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.80 | 73.0 | 4.87e-01 | 100.0% | 97.7% |
| 1rp5A01 | 2.20.70.70 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.80 | 52.0 | 5.76e-01 | 77.6% | 91.7% |
| 4h5iB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.75 | 58.0 | 3.50e-01 | 100.0% | 12.5% |
| 3sc7X01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.72 | 63.0 | 3.82e-01 | 100.0% | 17.6% |
| 2lezA00 | 3.30.2450.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 | 0.72 | 57.0 | 4.28e-01 | 100.0% | 35.8% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.71 | 56.0 | 4.02e-01 | 100.0% | 29.5% |
| 6p3lA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 54.0 | 4.14e-01 | 100.0% | 36.5% |
| 4ozuA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 56.0 | 3.41e-01 | 100.0% | 13.8% |
| 5c71A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 51.0 | 4.07e-01 | 81.6% | 65.6% |
| 3dkzA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.67 | 59.0 | 4.39e-01 | 100.0% | 77.6% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.67 | 49.0 | 3.38e-01 | 79.6% | 24.7% |
| 8fkmA01 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.66 | 57.0 | 3.99e-01 | 100.0% | 54.3% |
| 1wzvA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.65 | 54.0 | 3.96e-01 | 100.0% | 86.7% |
| 5tz6B02 | 3.10.129.120 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.65 | 56.0 | 4.00e-01 | 100.0% | 65.6% |
| 2efiA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 42.0 | 3.40e-01 | 85.7% | 33.0% |
| 3fvzA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.64 | 55.0 | 3.33e-01 | 100.0% | 15.2% |
| 3mnmA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.63 | 55.0 | 4.24e-01 | 100.0% | 68.8% |
| 2f5kA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 41.0 | 4.09e-01 | 91.8% | 64.0% |
| 3g8yA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.63 | 53.0 | 3.17e-01 | 100.0% | 25.1% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 53.0 | 4.72e-01 | 100.0% | 69.3% |
| 3eeaA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.62 | 47.0 | 3.33e-01 | 81.6% | 37.3% |
| 6rptC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 47.0 | 3.58e-01 | 83.7% | 63.4% |
| 1ltxR02 | 3.30.519.10 | Alpha Beta › 2-Layer Sandwich › Guanine Nucleotide Dissociation Inhibitor; domain 2 › Guanine Nucleotide Dissociation Inhibitor, domain 2 | 0.61 | 49.0 | 3.33e-01 | 89.8% | 43.3% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.60 | 53.0 | 4.26e-01 | 100.0% | 54.1% |
| 3ecfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 49.0 | 3.77e-01 | 100.0% | 38.3% |
| 3f14A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 48.0 | 3.81e-01 | 93.9% | 47.3% |
| 2rsxA00 | 3.10.450.420 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 48.0 | 3.48e-01 | 93.9% | 30.2% |
| 1gyvA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.59 | 47.0 | 3.78e-01 | 100.0% | 68.3% |
| 2xwxA03 | 2.60.40.2550 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 48.0 | 3.85e-01 | 91.8% | 69.4% |
| 4e19A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 44.0 | 3.24e-01 | 81.6% | 30.1% |
| 3lh4A00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 47.0 | 3.79e-01 | 100.0% | 59.1% |
| 5evhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 45.0 | 3.59e-01 | 98.0% | 38.8% |
| 4hd5A01 | 2.60.40.3760 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 40.0 | 3.32e-01 | 77.6% | 72.2% |
| 1z52A02 | 3.30.412.10 | Alpha Beta › 2-Layer Sandwich › Proaerolysin; Chain A, domain 2 › Proaerolysin, chain A, domain 2 | 0.57 | 44.0 | 3.13e-01 | 91.8% | 40.5% |
| 1jvnA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 41.0 | 2.57e-01 | 81.6% | 30.7% |
| 8dhaA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 3.47e-01 | 81.6% | 72.4% |
| 5ahoA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.55 | 44.0 | 3.08e-01 | 98.0% | 24.6% |
| 1y44A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 45.0 | 2.86e-01 | 98.0% | 52.2% |
| 1i1jB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 44.0 | 3.56e-01 | 100.0% | 83.7% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3242109 | 5.1.4.172 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_CAF1B_HIR1 | 0.74 | 64.0 | 3.59e-01 | 100.0% | 10.5% |
| 4943617 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.71 | 61.0 | 3.59e-01 | 100.0% | 12.3% |
| 3933425 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.70 | 59.0 | 4.56e-01 | 100.0% | 41.7% |
| 4030163 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.70 | 60.0 | 4.77e-01 | 100.0% | 49.5% |
| 3343255 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.70 | 61.0 | 3.52e-01 | 100.0% | 11.4% |
| 3890539 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.70 | 57.0 | 5.38e-01 | 100.0% | 76.7% |
| 3666222 | 4099.1.1.2 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 | 0.70 | 54.0 | 4.47e-01 | 95.9% | 46.7% |
| 3781121 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.70 | 55.0 | 3.34e-01 | 100.0% | 12.9% |
| 3805804 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.68 | 54.0 | 4.53e-01 | 100.0% | 50.6% |
| 5049367 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.68 | 60.0 | 4.30e-01 | 100.0% | 78.6% |
| 4948943 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.68 | 59.0 | 5.06e-01 | 98.0% | 70.5% |
| 4943218 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.67 | 59.0 | 4.41e-01 | 100.0% | 88.0% |
| 3972760 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.67 | 56.0 | 5.08e-01 | 98.0% | 67.1% |
| 5060392 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.67 | 59.0 | 3.67e-01 | 98.0% | 33.5% |
| 3698492 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.67 | 60.0 | 4.42e-01 | 100.0% | 42.4% |
| 3880624 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.67 | 56.0 | 4.78e-01 | 95.9% | 57.5% |
| 2104079 | 244.4.1.4 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › PF27537 | 0.66 | 45.0 | 4.68e-01 | 77.6% | 80.0% |
| 4948500 | 2003.1.3.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 | 0.65 | 57.0 | 3.45e-01 | 100.0% | 33.4% |
| 5079755 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.65 | 56.0 | 5.42e-01 | 98.0% | 92.7% |
| 3286426 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.64 | 55.0 | 4.86e-01 | 100.0% | 70.7% |
| 4961770 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.64 | 53.0 | 4.07e-01 | 100.0% | 90.4% |
| 4123449 | 4.8.1.35 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 | 0.64 | 50.0 | 4.30e-01 | 91.8% | 57.6% |
| 5014272 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.63 | 53.0 | 4.83e-01 | 100.0% | 72.9% |
| 3226909 | 331.15.1.0 ↗ | a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 | 0.63 | 55.0 | 4.78e-01 | 100.0% | 64.0% |
| 4968133 | 4312.1.1.1 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › BrnT_toxin | 0.62 | 51.0 | 4.32e-01 | 100.0% | 53.8% |
| 3178087 | 331.9.1.1 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Alpha_adaptin_C | 0.62 | 51.0 | 3.86e-01 | 100.0% | 85.9% |
| 4077054 | 3518.1.1.1 ↗ | a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind | 0.61 | 51.0 | 4.02e-01 | 100.0% | 60.9% |
| 3886721 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 53.0 | 4.33e-01 | 98.0% | 64.4% |
| 3880623 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.60 | 50.0 | 4.13e-01 | 100.0% | 51.0% |
| 3451905 | 5015.1.1.0 ↗ | extended segments › PetM subunit of the cytochrome b6f complex › PetM subunit of the cytochrome b6f complex › PetM subunit of the cytochrome b6f complex | 0.60 | 51.0 | 5.10e-01 | 100.0% | 94.0% |
| 3510414 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.60 | 52.0 | 4.48e-01 | 100.0% | 73.8% |
| 3226744 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 51.0 | 4.25e-01 | 100.0% | 65.6% |
| 3723630 | 12.1.1.10 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amy_C_pro | 0.57 | 49.0 | 3.91e-01 | 100.0% | 85.7% |
| 4258093 | 247.1.1.33 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, Lactamase_B_2, Anti-Pycsar_Apyc1 | 0.56 | 44.0 | 2.76e-01 | 89.8% | 44.6% |
| 5067655 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.56 | 44.0 | 2.75e-01 | 89.8% | 45.3% |
| 4091718 | 2004.1.1.442 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 | 0.56 | 48.0 | 2.91e-01 | 100.0% | 26.3% |
| 3942573 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 38.0 | 3.72e-01 | 79.6% | 63.8% |
| 3999888 | 4018.1.1.0 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases | 0.55 | 42.0 | 3.23e-01 | 95.9% | 33.1% |
| 4382195 | 247.1.1.31 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_4, Anti-Pycsar_Apyc1 | 0.55 | 43.0 | 2.68e-01 | 89.8% | 43.1% |
| 3616598 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.54 | 46.0 | 3.79e-01 | 100.0% | 60.0% |
| 4970858 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.54 | 49.0 | 3.71e-01 | 100.0% | 45.5% |
| 4508616 | 247.1.1.29 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2, Anti-Pycsar_Apyc1 | 0.54 | 45.0 | 2.81e-01 | 98.0% | 58.1% |
| 5026554 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.53 | 44.0 | 2.72e-01 | 95.9% | 53.8% |
| 4111218 | 247.1.1.35 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2, Lactamase_B_4, Anti-Pycsar_Apyc1 | 0.53 | 44.0 | 2.75e-01 | 98.0% | 56.6% |