Back to structures

NC_030945.1__YP_009276849.1__BH791_gp43__00043

Bact-Vir

NC_030945.1__YP_009276849.1__BH791_gp43__00043

Identity

Accession:
NC_030945 ↗
Kingdom:
phage

Quality

76.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 29-83
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.83 76.0 7.16e-01 100.0% 92.3%
3udfA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.80 72.0 5.93e-01 100.0% 80.0%
2wg5F02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 72.0 7.08e-01 100.0% 96.6%
1z47A02 2.40.50.300 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 53.0 5.72e-01 100.0% 100.0%
1oxxK03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.71 52.0 5.62e-01 100.0% 97.8%
2qcpX01 2.40.50.320 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF 0.71 61.0 5.56e-01 100.0% 93.3%
2kcmA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 59.0 5.44e-01 98.2% 87.8%
1cukA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 61.0 5.81e-01 100.0% 97.0%
3go5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 59.0 5.29e-01 98.2% 82.3%
1jt8A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 58.0 4.81e-01 100.0% 61.8%
1bvsA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 58.0 5.54e-01 100.0% 96.9%
4rg1A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 60.0 5.70e-01 100.0% 90.8%
3eoiA00 3.30.450.360 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.66 42.0 3.30e-01 76.4% 29.3%
2id0A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 56.0 5.08e-01 100.0% 74.4%
3qwnD01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.65 55.0 5.15e-01 100.0% 92.9%
3irbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 55.0 5.14e-01 100.0% 100.0%
5swvC02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.63 49.0 3.71e-01 100.0% 35.3%
1vq8X00 3.10.440.10 Alpha Beta › Roll › Ribosomal Protein L31e; Chain: W; › Ribosomal protein L31 0.62 52.0 4.69e-01 100.0% 100.0%
3nswA00 2.40.50.780 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 53.0 4.36e-01 100.0% 65.1%
1k3rA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 50.0 4.91e-01 100.0% 91.5%
1b3qA04 2.40.50.180 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 0.59 50.0 4.79e-01 96.4% 96.8%
6o38A02 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 3.73e-01 100.0% 53.3%
3soeA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.54 41.0 3.43e-01 83.6% 77.2%
1byfA00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.52 43.0 3.47e-01 100.0% 47.2%
7jptA01 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.52 42.0 3.45e-01 100.0% 45.5%
2q7dA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 41.0 2.98e-01 100.0% 48.0%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 31.0 3.01e-01 100.0% 48.5%
2vuvA00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.51 41.0 3.31e-01 100.0% 58.9%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4606649 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.87 80.0 7.39e-01 100.0% 95.6%
4399115 2.1.1.13 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.86 80.0 7.49e-01 100.0% 93.8%
4957569 2.7.1.1 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V 0.84 76.0 6.27e-01 100.0% 76.8%
3598854 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.82 74.0 5.41e-01 100.0% 57.1%
5028505 2.1.1.1 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.81 73.0 5.35e-01 100.0% 57.9%
4932594 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.81 73.0 6.09e-01 100.0% 60.0%
3980538 2.7.1.1 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V 0.80 73.0 6.52e-01 100.0% 92.0%
3711866 2.1.1.106 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PRS7_OB 0.80 73.0 5.79e-01 100.0% 59.0%
4975253 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 69.0 5.93e-01 100.0% 75.3%
5045871 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.75 68.0 6.23e-01 100.0% 97.1%
4975151 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 64.0 6.40e-01 92.7% 98.2%
3930530 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 66.0 5.61e-01 100.0% 66.7%
3840116 2.1.1.172 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNR_OB1_NT 0.74 65.0 5.28e-01 100.0% 56.2%
4967975 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 65.0 4.93e-01 100.0% 62.3%
4501379 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 63.0 5.58e-01 96.4% 80.0%
3376913 2.1.1.28 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C 0.73 65.0 5.14e-01 100.0% 57.3%
3539840 2.1.1.188 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSDE1 0.72 64.0 5.54e-01 100.0% 94.1%
5049738 2.1.1.94 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TLP1_add_C 0.72 63.0 5.58e-01 98.2% 91.3%
3169627 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.72 62.0 5.41e-01 98.2% 80.0%
3326221 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 63.0 5.21e-01 98.2% 94.7%
3953025 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 62.0 5.53e-01 100.0% 77.5%
4930895 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 63.0 5.52e-01 100.0% 78.8%
4024087 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 60.0 5.46e-01 98.2% 78.7%
3215090 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 60.0 5.70e-01 98.2% 93.8%
4930381 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.68 59.0 5.04e-01 100.0% 82.8%
5004480 2.1.1.364 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF2110 0.67 57.0 5.12e-01 100.0% 90.0%
4967263 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.67 60.0 4.76e-01 100.0% 93.6%
5074506 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.67 58.0 4.91e-01 100.0% 78.7%
3907623 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.67 57.0 4.79e-01 100.0% 73.0%
3925245 2.1.1.37 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind 0.66 57.0 5.07e-01 100.0% 73.8%
355 2.1.1.38 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB 0.65 55.0 5.03e-01 100.0% 72.0%
3491522 2.1.1.37 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind 0.64 56.0 4.87e-01 100.0% 68.2%
4956065 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.63 54.0 4.51e-01 98.2% 98.0%
5067243 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 52.0 5.11e-01 98.2% 86.7%
3512515 247.1.1.45 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, RMMBL, Lactamase_B_2 0.63 42.0 2.63e-01 70.9% 14.8%
4646733 1.1.11.1 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.62 53.0 4.49e-01 100.0% 98.0%
3273216 3940.1.1.0 a+b two layers › Spliceosomal helicase Aquarius insert domain › Spliceosomal helicase Aquarius insert domain › Spliceosomal helicase Aquarius insert domain 0.62 53.0 5.22e-01 100.0% 98.3%
5065332 2.1.1.21 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Methyltrn_RNA_3 0.62 51.0 4.75e-01 100.0% 73.3%
3943027 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 51.0 4.70e-01 100.0% 98.7%
3479778 209.1.1.0 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like 0.60 49.0 3.78e-01 100.0% 44.7%
5043072 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 50.0 4.68e-01 100.0% 77.1%
3302541 1.1.11.6 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › PF31239 0.57 47.0 3.85e-01 100.0% 96.5%
3931908 209.1.1.0 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like 0.56 44.0 3.47e-01 100.0% 37.8%
3832696 1.1.11.6 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › PF31239 0.56 46.0 3.80e-01 100.0% 96.5%
3847357 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.56 45.0 3.85e-01 100.0% 72.4%
3818081 1.1.11.6 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › PF31239 0.55 44.0 3.60e-01 96.4% 84.2%
3486429 209.1.1.0 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like 0.53 45.0 3.39e-01 100.0% 54.5%
3900658 209.1.1.1 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.52 42.0 3.23e-01 100.0% 36.0%
3225590 209.1.1.1 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.51 41.0 3.35e-01 100.0% 60.2%
3775570 209.1.1.1 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.51 41.0 3.27e-01 100.0% 40.0%
3935277 209.1.1.1 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.51 43.0 3.36e-01 100.0% 58.5%
3902382 209.1.1.1 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.51 40.0 3.13e-01 100.0% 37.1%
3552630 209.1.1.1 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.51 40.0 3.12e-01 100.0% 45.8%
4238761 3943.1.1.0 beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains 0.50 35.0 3.24e-01 78.2% 67.5%