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NC_030951.1__YP_009277403.1__phiCTC2B_62__00062

Bact-Vir

Identity

Accession:: NC_030951 ↗
Kingdom:: phage

Quality

94.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Clostridium_phage_phiCTC2B

TaxID: 1567016

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-167

PDB

Domain cluster: rep: IMGVR_UViG_7000000171_000112-7000000171-SRS052697_LANL_scaffold_75554__gene_171382__D9-163

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF13274.12 best	SocA_Panacea	55.5	1.60e-14	56.7%	100.0%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3964088	101.1.2.269 ↗	alpha arrays › HTH › HTH › winged helix domain › SocA_Panacea	0.75	66.0	6.42e-01	91.5%	87.2%
4940657	101.1.2.269 ↗	alpha arrays › HTH › HTH › winged helix domain › SocA_Panacea	0.72	66.0	6.61e-01	97.6%	95.1%
5031700	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.72	60.0	5.88e-01	87.2%	85.7%
5006976	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.60	55.0	5.59e-01	98.2%	98.8%

D2 high residues 174-222

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1g9sA00	3.40.50.2020	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.56	42.0	2.99e-01	85.7%	62.1%
4wz9A02	1.10.390.10	Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2	0.56	45.0	3.00e-01	100.0%	37.0%
5zi7A02	3.30.2010.30	Alpha Beta › 2-Layer Sandwich › Zincin-like ›	0.56	43.0	3.84e-01	98.0%	97.6%
2zpaA02	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.51	38.0	2.87e-01	85.7%	77.2%
4chiA02	3.20.10.10	Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2	0.51	36.0	2.52e-01	75.5%	25.0%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4028080	148.1.3.8 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small	0.68	57.0	4.73e-01	100.0%	87.4%
4976681	327.11.1.0 ↗	a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II)	0.64	55.0	4.29e-01	100.0%	67.3%
3947738	2007.1.13.3 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › GD_AH_second	0.54	40.0	3.06e-01	87.8%	80.0%
4010009	2003.1.1.89 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GD_AH_second	0.53	39.0	2.98e-01	83.7%	82.9%
3368873	2008.2.1.0 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like	0.53	37.0	2.76e-01	73.5%	46.4%
3880203	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.53	40.0	2.90e-01	98.0%	51.3%
4935170	2003.1.5.24 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10	0.52	44.0	2.83e-01	100.0%	29.5%
3899609	7512.1.1.66 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Exostosin_GT47	0.52	37.0	2.52e-01	75.5%	47.5%
3814933	2007.1.16.0 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2	0.51	39.0	2.84e-01	87.8%	82.0%