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NC_031004.1__YP_009277977.1__BIZ68_gp59__00059
Bact-VirNC_031004.1__YP_009277977.1__BIZ68_gp59__00059
Identity
- Accession:
- NC_031004 ↗
- Kingdom:
- phage
Quality
92.8
mean pLDDT
Taxonomy
TaxID: 1887651
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-83
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4oe8C00 | 1.10.8.1170 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.76 | 61.0 | 5.89e-01 | 85.9% | 78.2% |
| 4rm7A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.67 | 59.0 | 4.94e-01 | 100.0% | 75.5% |
| 1xfiA02 | 1.20.1700.10 | Mainly Alpha › Up-down Bundle › AF1104-like › AF1104-like | 0.66 | 50.0 | 4.84e-01 | 85.9% | 71.1% |
| 1h3lB00 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.57 | 41.0 | 4.12e-01 | 84.6% | 74.4% |
| 2hjmA01 | 1.20.120.460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like | 0.56 | 48.0 | 4.74e-01 | 100.0% | 94.2% |
| 3triA02 | 1.10.3730.10 | Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like | 0.56 | 44.0 | 4.09e-01 | 87.2% | 65.0% |
| 3egqA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 43.0 | 3.41e-01 | 83.3% | 55.5% |
| 3djbA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.56 | 48.0 | 4.56e-01 | 100.0% | 92.7% |
| 3tp3A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 44.0 | 3.62e-01 | 87.2% | 73.6% |
| 3kdrA01 | 1.20.1270.210 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.55 | 47.0 | 4.30e-01 | 96.2% | 72.6% |
| 3q23A04 | 6.10.140.1370 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 40.0 | 3.88e-01 | 87.2% | 69.2% |
| 2ycdA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 41.0 | 3.63e-01 | 80.8% | 66.7% |
| 1q5nA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.54 | 42.0 | 4.17e-01 | 93.6% | 80.2% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3625741 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.72 | 41.0 | 3.88e-01 | 79.5% | 48.9% |
| 5028679 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.71 | 57.0 | 5.21e-01 | 87.2% | 69.9% |
| 4165654 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.68 | 50.0 | 3.52e-01 | 78.2% | 81.6% |
| 3653770 | 632.22.1.30 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › Aa_trans | 0.67 | 53.0 | 5.17e-01 | 84.6% | 90.6% |
| 4345163 | 633.10.1.28 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › PF27080 | 0.65 | 57.0 | 5.05e-01 | 100.0% | 87.0% |
| 3452591 | 101.1.1.138 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD | 0.62 | 46.0 | 4.08e-01 | 76.9% | 73.6% |
| 3236694 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.61 | 52.0 | 4.44e-01 | 100.0% | 94.3% |
| 3400449 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 47.0 | 3.62e-01 | 83.3% | 48.0% |
| 3959854 | 3997.1.1.0 ↗ | alpha arrays › Helical insertion domain in magnesium chelatase catalytic subunit › Helical insertion domain in magnesium chelatase catalytic subunit › Helical insertion domain in magnesium chelatase catalytic subunit | 0.57 | 41.0 | 3.14e-01 | 83.3% | 31.6% |
| 3972978 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.55 | 42.0 | 4.43e-01 | 91.0% | 92.9% |