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NC_031010.1__YP_009278859.1__BIZ80_gp045__00246
Bact-VirNC_031010.1__YP_009278859.1__BIZ80_gp045__00246
Identity
- Accession:
- NC_031010 ↗
- Kingdom:
- phage
Quality
83.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Wellingtonvirus›
Erwinia_phage_vB_EamM_Kwan
TaxID: 1883374
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-85
Domain cluster:
rep: NC_048754.1__YP_009844237.1__HWC10_gp082__00082__D98-181
D2
high
residues 90-152
Domain cluster:
representative
CATH (59)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fixA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.70 | 43.0 | 3.12e-01 | 100.0% | 23.6% |
| 4pg4B03 | 3.30.70.3100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 48.0 | 4.60e-01 | 100.0% | 62.7% |
| 6u9hF02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.65 | 42.0 | 3.98e-01 | 100.0% | 54.5% |
| 2diuA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.65 | 46.0 | 4.45e-01 | 100.0% | 65.8% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.63 | 43.0 | 3.25e-01 | 71.4% | 62.4% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.63 | 41.0 | 3.86e-01 | 100.0% | 56.0% |
| 1rkiA01 | 3.30.70.1650 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › PDO, CxxC motif | 0.62 | 44.0 | 3.84e-01 | 98.4% | 48.5% |
| 5llwA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.62 | 48.0 | 3.77e-01 | 100.0% | 39.4% |
| 3mtkA00 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.62 | 49.0 | 3.61e-01 | 100.0% | 33.1% |
| 2f1fA02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.62 | 40.0 | 3.78e-01 | 100.0% | 53.8% |
| 5xgbA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.61 | 47.0 | 3.43e-01 | 100.0% | 30.2% |
| 3r5gA00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.61 | 47.0 | 3.35e-01 | 100.0% | 27.7% |
| 3hvaA00 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.61 | 48.0 | 3.58e-01 | 100.0% | 34.0% |
| 6d9mA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.61 | 47.0 | 3.60e-01 | 100.0% | 35.8% |
| 3ofgB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 47.0 | 4.27e-01 | 100.0% | 62.1% |
| 7e6gA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.60 | 47.0 | 3.59e-01 | 100.0% | 36.2% |
| 2qv6B02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.60 | 48.0 | 3.91e-01 | 100.0% | 45.9% |
| 3hvwA00 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.60 | 48.0 | 3.60e-01 | 100.0% | 35.2% |
| 5oyhD00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.60 | 46.0 | 3.36e-01 | 100.0% | 29.2% |
| 1wc1C00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.60 | 46.0 | 3.35e-01 | 100.0% | 28.6% |
| 8k1fC01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 42.0 | 2.98e-01 | 74.6% | 88.8% |
| 6eibD00 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.59 | 46.0 | 3.52e-01 | 100.0% | 35.3% |
| 4c98A01 | 3.30.70.1890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 51.0 | 4.36e-01 | 100.0% | 59.0% |
| 6zxbA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.59 | 45.0 | 3.54e-01 | 100.0% | 37.5% |
| 6pwjA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.59 | 46.0 | 3.48e-01 | 100.0% | 33.9% |
| 1nf2A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.59 | 37.0 | 3.21e-01 | 100.0% | 38.7% |
| 4bndA02 | 3.30.1240.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain | 0.58 | 46.0 | 4.05e-01 | 100.0% | 57.3% |
| 2w01B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.58 | 45.0 | 3.26e-01 | 100.0% | 27.9% |
| 4gf3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.58 | 41.0 | 3.36e-01 | 100.0% | 39.0% |
| 2pd1A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 40.0 | 3.60e-01 | 74.6% | 86.3% |
| 1g5gA02 | 1.10.287.2480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 46.0 | 3.51e-01 | 93.7% | 100.0% |
| 2qv6A01 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.58 | 47.0 | 3.73e-01 | 100.0% | 44.5% |
| 1azsA00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.57 | 45.0 | 3.26e-01 | 100.0% | 28.9% |
| 4aimA03 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.57 | 42.0 | 4.07e-01 | 100.0% | 70.4% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.57 | 40.0 | 3.97e-01 | 100.0% | 70.6% |
| 4ymhD00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 43.0 | 2.96e-01 | 82.5% | 95.7% |
| 6hbzA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.56 | 44.0 | 3.38e-01 | 100.0% | 35.2% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.56 | 40.0 | 3.79e-01 | 100.0% | 62.3% |
| 4wp3C00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.56 | 43.0 | 3.15e-01 | 100.0% | 29.4% |
| 1ybtB00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.55 | 43.0 | 3.20e-01 | 100.0% | 32.0% |
| 4q5eA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 39.0 | 3.82e-01 | 100.0% | 68.0% |
| 2vz6B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 42.0 | 3.91e-01 | 100.0% | 65.1% |
| 2hnkA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 44.0 | 3.02e-01 | 88.9% | 96.9% |
| 7xhzA01 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.54 | 37.0 | 3.05e-01 | 96.8% | 36.6% |
| 4r78A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 40.0 | 3.51e-01 | 100.0% | 52.1% |
| 1e7uA04 | 3.30.1010.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 | 0.54 | 45.0 | 3.44e-01 | 95.2% | 91.8% |
| 1i94H01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.54 | 35.0 | 3.36e-01 | 100.0% | 53.8% |
| 3mr7A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.54 | 42.0 | 3.13e-01 | 100.0% | 31.8% |
| 6lbsB01 | 3.30.1370.230 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain | 0.54 | 45.0 | 4.25e-01 | 98.4% | 75.9% |
| 1wibA00 | 3.30.1550.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain | 0.54 | 38.0 | 3.46e-01 | 77.8% | 70.7% |
| 4cllA01 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.53 | 45.0 | 3.17e-01 | 100.0% | 29.5% |
| 1d5aA03 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.53 | 47.0 | 3.48e-01 | 100.0% | 56.7% |
| 1ab8A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.53 | 45.0 | 3.30e-01 | 100.0% | 34.5% |
| 2wz1B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.52 | 45.0 | 3.21e-01 | 100.0% | 31.1% |
| 1wwzA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 39.0 | 3.04e-01 | 84.1% | 54.8% |
| 1t6eX01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.52 | 44.0 | 3.32e-01 | 100.0% | 100.0% |
| 3cxjA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 39.0 | 3.10e-01 | 100.0% | 36.8% |
| 3havA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 39.0 | 3.50e-01 | 98.4% | 59.6% |
| 1u5tB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 39.0 | 3.65e-01 | 92.1% | 82.4% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3713464 | 375.1.1.207 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › FAZ1_cons | 0.70 | 60.0 | 5.33e-01 | 100.0% | 66.7% |
| 3704046 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.69 | 58.0 | 5.12e-01 | 100.0% | 63.2% |
| 3260643 | 304.8.1.49 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 | 0.68 | 46.0 | 4.24e-01 | 100.0% | 55.0% |
| 3796322 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.68 | 59.0 | 4.91e-01 | 100.0% | 63.5% |
| 3795358 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 46.0 | 4.34e-01 | 100.0% | 60.0% |
| 3521668 | 304.8.1.49 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 | 0.66 | 47.0 | 4.37e-01 | 100.0% | 60.0% |
| 3615029 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.65 | 54.0 | 4.89e-01 | 100.0% | 66.7% |
| 3594156 | 304.8.1.49 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 | 0.65 | 46.0 | 4.35e-01 | 100.0% | 62.7% |
| 3617015 | 304.120.1.12 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › PF26955 | 0.64 | 48.0 | 4.36e-01 | 100.0% | 60.0% |
| 3408002 | 304.8.1.49 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 | 0.63 | 49.0 | 4.07e-01 | 100.0% | 48.2% |
| 4027252 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.62 | 48.0 | 3.07e-01 | 100.0% | 16.6% |
| 4094511 | 304.48.1.22 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GCH_III | 0.62 | 49.0 | 4.05e-01 | 100.0% | 47.8% |
| 4062713 | 304.48.1.92 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › PF30234 | 0.62 | 50.0 | 4.03e-01 | 100.0% | 44.8% |
| 4598614 | 304.48.1.22 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GCH_III | 0.62 | 48.0 | 3.96e-01 | 100.0% | 45.8% |
| 3957440 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.61 | 47.0 | 3.17e-01 | 100.0% | 21.2% |
| 5043528 | 304.48.1.22 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GCH_III | 0.60 | 48.0 | 3.89e-01 | 100.0% | 45.8% |
| 3275694 | 872.3.1.6 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_3 | 0.60 | 52.0 | 4.56e-01 | 100.0% | 65.0% |
| 5022045 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 43.0 | 3.67e-01 | 100.0% | 42.5% |
| 135348 | 304.48.1.14 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF | 0.60 | 48.0 | 3.60e-01 | 100.0% | 35.2% |
| 3978064 | 304.51.1.3 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_assoc | 0.60 | 52.0 | 4.81e-01 | 100.0% | 76.2% |
| 3958612 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.59 | 46.0 | 3.26e-01 | 100.0% | 26.2% |
| 3973496 | 304.48.1.14 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF | 0.59 | 45.0 | 3.41e-01 | 100.0% | 32.7% |
| 3964094 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.59 | 49.0 | 3.86e-01 | 100.0% | 42.7% |
| 4928490 | 304.48.1.22 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GCH_III | 0.58 | 47.0 | 3.13e-01 | 100.0% | 22.8% |
| 3988939 | 225.1.1.17 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c+His_kinase | 0.58 | 49.0 | 3.71e-01 | 100.0% | 37.5% |
| 3718335 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.57 | 50.0 | 4.95e-01 | 100.0% | 100.0% |
| 4355727 | 304.9.1.71 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SNU71_RBD | 0.57 | 50.0 | 3.90e-01 | 100.0% | 47.1% |
| 3952999 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.57 | 44.0 | 3.27e-01 | 100.0% | 31.4% |
| 3496338 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.57 | 48.0 | 4.07e-01 | 100.0% | 56.2% |
| 5008575 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.57 | 47.0 | 3.80e-01 | 100.0% | 48.9% |
| 3671219 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 48.0 | 4.19e-01 | 100.0% | 82.0% |
| 1145976 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.55 | 47.0 | 3.20e-01 | 100.0% | 25.3% |
| 3616629 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.55 | 46.0 | 3.08e-01 | 100.0% | 23.1% |
| 278624 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.55 | 43.0 | 3.20e-01 | 100.0% | 32.0% |
| 4949872 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.55 | 40.0 | 3.31e-01 | 100.0% | 40.0% |
| 3999306 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.55 | 46.0 | 3.22e-01 | 100.0% | 27.7% |
| 3832606 | 304.8.1.49 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 | 0.55 | 48.0 | 3.65e-01 | 100.0% | 77.3% |
| 2075912 | 3012.1.1.2 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › PMM | 0.54 | 46.0 | 4.03e-01 | 100.0% | 98.0% |
| 3619500 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.54 | 46.0 | 2.95e-01 | 100.0% | 19.4% |
| 4032336 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.54 | 45.0 | 3.79e-01 | 100.0% | 55.2% |
| 4360285 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.54 | 46.0 | 3.56e-01 | 100.0% | 70.7% |
| 3532358 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 45.0 | 2.91e-01 | 100.0% | 34.5% |
| 4572176 | 304.120.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer | 0.54 | 43.0 | 4.12e-01 | 100.0% | 74.7% |
| 3589868 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.53 | 45.0 | 3.53e-01 | 100.0% | 44.3% |
| 4162926 | 241.1.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT | 0.53 | 40.0 | 3.21e-01 | 100.0% | 40.0% |
| 3423771 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.53 | 48.0 | 3.80e-01 | 100.0% | 63.2% |
| 3214972 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.53 | 39.0 | 3.69e-01 | 100.0% | 63.5% |
| 5045407 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.52 | 37.0 | 2.98e-01 | 100.0% | 36.2% |
| None | — | 0.52 | 45.0 | 3.21e-01 | 100.0% | 31.6% | |
| 3722124 | 101.1.2.165 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC_WH_C | 0.52 | 39.0 | 3.20e-01 | 85.7% | 50.8% |
| 3613455 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.51 | 46.0 | 3.55e-01 | 100.0% | 54.7% |
| 3598488 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.51 | 46.0 | 3.42e-01 | 100.0% | 66.5% |
| 3164241 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.51 | 43.0 | 3.83e-01 | 100.0% | 66.7% |
| 3591785 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.51 | 45.0 | 3.41e-01 | 100.0% | 50.0% |
| 3254346 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.50 | 37.0 | 2.90e-01 | 82.5% | 55.3% |
| 3706910 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.50 | 45.0 | 3.15e-01 | 100.0% | 67.5% |
| 3601652 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.50 | 42.0 | 3.54e-01 | 100.0% | 53.9% |
| 3608339 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.50 | 45.0 | 3.49e-01 | 100.0% | 55.6% |
D3
high
residues 163-214
Domain cluster:
rep: rifoxyc1_full_scaffold_3_prodigal-single.1__X__X__00232__D1-65
CATH (67)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 58.0 | 5.46e-01 | 78.8% | 83.9% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 57.0 | 5.42e-01 | 80.8% | 80.6% |
| 6jy5B00 | 2.40.50.220 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml | 0.76 | 53.0 | 4.53e-01 | 73.1% | 89.0% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.75 | 55.0 | 5.30e-01 | 78.8% | 67.2% |
| 3c96A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.74 | 50.0 | 3.44e-01 | 71.2% | 41.1% |
| 2vqeL00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 50.0 | 3.85e-01 | 75.0% | 57.3% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 52.0 | 4.66e-01 | 80.8% | 77.3% |
| 1vq8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 48.0 | 4.20e-01 | 71.2% | 47.4% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 50.0 | 4.60e-01 | 76.9% | 97.0% |
| 1x6oA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 52.0 | 4.56e-01 | 82.7% | 87.3% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 49.0 | 5.11e-01 | 78.8% | 100.0% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 57.0 | 5.11e-01 | 94.2% | 94.4% |
| 3l8kA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.66 | 46.0 | 3.48e-01 | 71.2% | 67.7% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 56.0 | 5.07e-01 | 96.2% | 94.4% |
| 3be3A00 | 2.30.30.320 | Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain | 0.64 | 49.0 | 4.39e-01 | 84.6% | 81.6% |
| 4oelB00 | 2.40.50.170 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C | 0.64 | 45.0 | 4.13e-01 | 75.0% | 69.6% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 46.0 | 4.47e-01 | 76.9% | 93.1% |
| 4b08A01 | 2.40.50.730 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 50.0 | 4.36e-01 | 88.5% | 77.8% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 47.0 | 4.82e-01 | 78.8% | 86.0% |
| 3uueA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.63 | 48.0 | 3.04e-01 | 82.7% | 85.7% |
| 4egvA02 | 2.40.50.840 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 46.0 | 4.11e-01 | 78.8% | 77.3% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 47.0 | 4.65e-01 | 80.8% | 76.8% |
| 3k7cA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 42.0 | 3.37e-01 | 71.2% | 77.8% |
| 3udfA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 46.0 | 3.75e-01 | 80.8% | 96.8% |
| 1eigA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 42.0 | 3.83e-01 | 75.0% | 54.8% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.60 | 44.0 | 4.26e-01 | 80.8% | 81.4% |
| 2qh0A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.60 | 40.0 | 3.10e-01 | 71.2% | 31.0% |
| 4me3A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 44.0 | 3.65e-01 | 78.8% | 52.6% |
| 3fogA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.59 | 44.0 | 3.62e-01 | 82.7% | 94.1% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 42.0 | 3.92e-01 | 76.9% | 65.2% |
| 2b4wA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 46.0 | 2.98e-01 | 92.3% | 22.3% |
| 3g12B00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 40.0 | 3.13e-01 | 71.2% | 32.7% |
| 4ntdA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 41.0 | 2.81e-01 | 76.9% | 50.0% |
| 1f9qD00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 41.0 | 3.87e-01 | 75.0% | 65.2% |
| 1eotA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 41.0 | 3.71e-01 | 76.9% | 58.1% |
| 2re3A02 | 2.30.270.10 | Mainly Beta › Roll › duf1285 protein fold › duf1285 protein | 0.58 | 46.0 | 4.26e-01 | 92.3% | 81.4% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 44.0 | 3.89e-01 | 96.2% | 71.3% |
| 4b63A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 41.0 | 2.44e-01 | 76.9% | 39.7% |
| 5hl8C00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.57 | 38.0 | 3.43e-01 | 71.2% | 79.7% |
| 3g7nB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 43.0 | 2.85e-01 | 86.5% | 89.1% |
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 39.0 | 3.72e-01 | 75.0% | 63.6% |
| 4v1ag00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 43.0 | 3.30e-01 | 94.2% | 62.2% |
| 3t8qB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.56 | 43.0 | 3.47e-01 | 90.4% | 85.2% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 39.0 | 3.65e-01 | 75.0% | 59.7% |
| 3itwA02 | 3.30.720.110 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.56 | 38.0 | 3.78e-01 | 71.2% | 64.3% |
| 2rk0A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 47.0 | 3.67e-01 | 100.0% | 87.6% |
| 4wiwA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.55 | 38.0 | 3.48e-01 | 71.2% | 55.1% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 44.0 | 3.51e-01 | 96.2% | 85.8% |
| 3n4eA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 43.0 | 3.58e-01 | 94.2% | 98.1% |
| 2oap101 | 3.30.450.380 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.55 | 45.0 | 3.02e-01 | 92.3% | 62.7% |
| 4e4fA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 40.0 | 3.19e-01 | 92.3% | 71.6% |
| 5cbeE00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 39.0 | 3.69e-01 | 78.8% | 64.1% |
| 3go2A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 41.0 | 3.42e-01 | 94.2% | 87.7% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 38.0 | 3.11e-01 | 76.9% | 45.0% |
| 3bjsA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 44.0 | 3.45e-01 | 94.2% | 88.0% |
| 3zfnA02 | 2.30.140.40 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain | 0.53 | 41.0 | 3.99e-01 | 84.6% | 73.7% |
| 4bwgD00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 38.0 | 3.25e-01 | 80.8% | 85.6% |
| 2r5vB02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 39.0 | 2.72e-01 | 82.7% | 31.8% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 39.0 | 2.98e-01 | 84.6% | 38.9% |
| 2czoA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 38.0 | 3.08e-01 | 86.5% | 90.8% |
| 2khxA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 40.0 | 3.69e-01 | 96.2% | 91.1% |
| 2p25A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 44.0 | 3.47e-01 | 100.0% | 89.9% |
| 2a9sB00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.52 | 42.0 | 3.07e-01 | 98.1% | 79.4% |
| 3oyyB03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 41.0 | 4.00e-01 | 88.5% | 84.5% |
| 4v1ap00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 40.0 | 3.47e-01 | 94.2% | 91.8% |
| 1t3aA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.51 | 38.0 | 2.38e-01 | 92.3% | 24.3% |
| 1b44D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 40.0 | 3.29e-01 | 92.3% | 73.6% |
ECOD (87)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4605602 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 60.0 | 5.56e-01 | 78.8% | 75.4% |
| 3742938 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.81 | 60.0 | 5.54e-01 | 78.8% | 80.0% |
| 3790904 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.80 | 56.0 | 5.34e-01 | 75.0% | 63.3% |
| 5052257 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 59.0 | 5.61e-01 | 80.8% | 76.7% |
| 2507076 | 2.16.1.1 ↗ | beta barrels › OB-fold › EutN/CcmL-like › EutN/CcmL-like › EutN_CcmL | 0.77 | 53.0 | 4.57e-01 | 73.1% | 89.0% |
| 3941152 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.77 | 54.0 | 5.04e-01 | 75.0% | 61.5% |
| 4027502 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 57.0 | 5.31e-01 | 80.8% | 75.4% |
| 4271974 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.76 | 56.0 | 5.25e-01 | 78.8% | 76.6% |
| 4300449 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.76 | 56.0 | 5.21e-01 | 78.8% | 76.9% |
| 3694693 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.75 | 55.0 | 5.16e-01 | 78.8% | 66.2% |
| 3930846 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.75 | 53.0 | 4.78e-01 | 75.0% | 57.1% |
| 4973274 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.75 | 51.0 | 5.05e-01 | 71.2% | 67.3% |
| 5022848 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 55.0 | 5.29e-01 | 78.8% | 83.3% |
| 2464247 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.74 | 54.0 | 5.06e-01 | 78.8% | 62.1% |
| 3736330 | 2003.1.2.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 | 0.73 | 50.0 | 2.83e-01 | 71.2% | 22.2% |
| 4012257 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 51.0 | 3.98e-01 | 75.0% | 62.3% |
| 3411042 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.72 | 52.0 | 5.01e-01 | 76.9% | 93.3% |
| 4416106 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.72 | 52.0 | 3.84e-01 | 76.9% | 64.9% |
| 3991073 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.72 | 52.0 | 5.17e-01 | 76.9% | 74.5% |
| 3962341 | 2003.1.3.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain | 0.72 | 49.0 | 3.29e-01 | 71.2% | 64.2% |
| 1000222 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.72 | 50.0 | 4.22e-01 | 75.0% | 77.2% |
| 4020029 | 2003.1.3.26 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FMO-like, NAD_binding_8 | 0.71 | 49.0 | 2.77e-01 | 71.2% | 24.0% |
| 3573585 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.71 | 50.0 | 4.98e-01 | 75.0% | 72.2% |
| 3733286 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.71 | 49.0 | 3.03e-01 | 71.2% | 43.7% |
| 5081654 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.70 | 63.0 | 6.01e-01 | 100.0% | 86.7% |
| 3283256 | 2003.1.2.21 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Trp_halogenase | 0.69 | 48.0 | 2.74e-01 | 71.2% | 30.0% |
| 3689390 | 2003.1.2.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like | 0.69 | 47.0 | 2.66e-01 | 71.2% | 22.5% |
| 4969515 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.69 | 46.0 | 2.74e-01 | 71.2% | 14.4% |
| 3298962 | 2003.1.3.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_3 | 0.68 | 47.0 | 3.05e-01 | 71.2% | 53.8% |
| 3197575 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.68 | 50.0 | 4.25e-01 | 80.8% | 70.0% |
| 3933293 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.68 | 49.0 | 4.77e-01 | 76.9% | 69.0% |
| 4399169 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.68 | 51.0 | 4.89e-01 | 80.8% | 75.0% |
| 5050497 | 2003.1.3.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 | 0.67 | 46.0 | 2.52e-01 | 71.2% | 7.2% |
| 2502534 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.67 | 50.0 | 4.25e-01 | 80.8% | 64.4% |
| 3660964 | 4.1.1.6 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C | 0.67 | 58.0 | 4.74e-01 | 100.0% | 73.0% |
| 3507420 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 48.0 | 3.95e-01 | 76.9% | 53.7% |
| 4241924 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.66 | 59.0 | 4.90e-01 | 100.0% | 81.1% |
| 4014812 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.66 | 48.0 | 4.69e-01 | 80.8% | 70.0% |
| 4945674 | 2.1.1.252 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2_C | 0.66 | 51.0 | 4.60e-01 | 82.7% | 65.7% |
| 4935709 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.66 | 49.0 | 3.93e-01 | 80.8% | 69.5% |
| 4099964 | 325.1.7.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C | 0.66 | 48.0 | 4.50e-01 | 78.8% | 80.0% |
| 5068388 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.66 | 49.0 | 4.85e-01 | 80.8% | 87.3% |
| 3396910 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.65 | 48.0 | 3.28e-01 | 76.9% | 78.9% |
| 4629735 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 57.0 | 5.28e-01 | 96.2% | 96.9% |
| 3415836 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.65 | 48.0 | 3.85e-01 | 78.8% | 68.6% |
| 4315771 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.65 | 50.0 | 4.67e-01 | 82.7% | 70.8% |
| 2122952 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.65 | 50.0 | 3.11e-01 | 82.7% | 83.6% |
| 1883336 | 1104.1.1.1 ↗ | a+b complex topology › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › DUF927 | 0.65 | 53.0 | 3.99e-01 | 96.2% | 50.3% |
| 5067186 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.65 | 48.0 | 3.99e-01 | 80.8% | 76.8% |
| 4208450 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 49.0 | 4.71e-01 | 82.7% | 76.7% |
| 3579710 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.63 | 52.0 | 4.18e-01 | 92.3% | 77.1% |
| 3704471 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 43.0 | 3.63e-01 | 71.2% | 73.3% |
| 4971532 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 55.0 | 4.96e-01 | 96.2% | 88.6% |
| 5065184 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 42.0 | 4.43e-01 | 71.2% | 95.6% |
| 5000431 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.61 | 42.0 | 2.52e-01 | 71.2% | 33.3% |
| 3511321 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.61 | 49.0 | 2.79e-01 | 94.2% | 12.2% |
| 3260528 | 2485.1.1.35 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › MRP_L53 | 0.60 | 50.0 | 4.05e-01 | 98.1% | 83.6% |
| 3787501 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 47.0 | 3.50e-01 | 84.6% | 97.1% |
| 4149372 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 49.0 | 4.61e-01 | 90.4% | 72.3% |
| 3199170 | 223.2.1.9 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N | 0.59 | 46.0 | 3.37e-01 | 92.3% | 44.2% |
| 5077760 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 45.0 | 2.69e-01 | 88.5% | 9.9% |
| 3588447 | 2003.1.1.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP | 0.58 | 45.0 | 2.99e-01 | 88.5% | 62.5% |
| 4943610 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.58 | 45.0 | 3.45e-01 | 88.5% | 48.4% |
| 3439990 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.57 | 41.0 | 3.47e-01 | 76.9% | 53.3% |
| 4456732 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.57 | 42.0 | 3.66e-01 | 75.0% | 68.8% |
| 1094905 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.57 | 40.0 | 3.69e-01 | 73.1% | 60.0% |
| 3241447 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.57 | 39.0 | 3.09e-01 | 73.1% | 91.7% |
| 4951333 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.57 | 44.0 | 3.46e-01 | 88.5% | 50.8% |
| 4255589 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.56 | 44.0 | 3.66e-01 | 90.4% | 98.0% |
| 5023580 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 38.0 | 3.60e-01 | 71.2% | 72.3% |
| 5054192 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.56 | 42.0 | 3.52e-01 | 86.5% | 88.0% |
| 3698104 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.55 | 44.0 | 3.66e-01 | 94.2% | 80.8% |
| 163341 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.55 | 43.0 | 3.54e-01 | 94.2% | 92.0% |
| 5039633 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.55 | 44.0 | 3.97e-01 | 90.4% | 70.3% |
| 3364309 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.54 | 40.0 | 3.07e-01 | 82.7% | 37.7% |
| 3247746 | 5.1.4.303 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BBS2_N, BBS2_Mid | 0.54 | 43.0 | 2.73e-01 | 94.2% | 20.7% |
| 3300506 | 4286.1.1.1 ↗ | beta complex topology › At5g01610-like › At5g01610-like › At5g01610-like › DUF538 | 0.53 | 39.0 | 3.03e-01 | 84.6% | 47.1% |
| 4349950 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.53 | 38.0 | 3.64e-01 | 76.9% | 88.3% |
| 4031999 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 41.0 | 3.67e-01 | 92.3% | 61.2% |
| 4359927 | 2003.1.2.99 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, FAD_binding_3 | 0.53 | 37.0 | 2.60e-01 | 76.9% | 92.8% |
| 3627778 | 220.1.1.64 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII | 0.53 | 39.0 | 3.21e-01 | 84.6% | 42.0% |
| 3276895 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 43.0 | 2.60e-01 | 100.0% | 98.8% |
| 3810543 | 220.1.1.20 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH | 0.51 | 37.0 | 2.98e-01 | 76.9% | 45.5% |
| 3949336 | 220.1.1.216 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Helicase_IV_N | 0.51 | 34.0 | 2.80e-01 | 71.2% | 46.4% |
| 3924612 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.51 | 41.0 | 3.18e-01 | 98.1% | 56.3% |
| 5076004 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 38.0 | 3.06e-01 | 86.5% | 52.1% |
| 3546306 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.50 | 38.0 | 3.28e-01 | 88.5% | 48.4% |