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NC_031013.1__YP_009279479.1__BI031_gp08__00008

Bact-Vir

NC_031013.1__YP_009279479.1__BI031_gp08__00008

Identity

Accession:
NC_031013 ↗
Kingdom:
phage

Quality

76.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lactococcus_phage_28201

TaxID: 1871678

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-40
PDB
Domain cluster: representative
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3227441 375.10.1.0 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha 0.85 70.0 6.13e-01 100.0% 61.7%
3297398 3939.1.1.0 ↗ alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.79 68.0 5.17e-01 100.0% 50.5%
3533601 101.1.1.345 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_KIF26A_B_1st 0.67 56.0 4.33e-01 92.5% 48.2%
3168517 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 45.0 4.59e-01 92.5% 75.0%
3884899 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.58 46.0 4.62e-01 95.0% 95.0%
3844446 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.52 34.0 3.84e-01 70.0% 90.0%
3508769 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.51 38.0 3.96e-01 77.5% 97.1%