←Back to structures
NC_031013.1__YP_009279522.1__BI031_gp51__00051
Bact-VirNC_031013.1__YP_009279522.1__BI031_gp51__00051
Identity
- Accession:
- NC_031013 ↗
- Kingdom:
- phage
Quality
87.1
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-134
Domain cluster:
rep: NC_028697.1__YP_009191553.1__AU092_gp46__00046__D5-141
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05382.20 best | Amidase_5 | 225.6 | 2.90e-67 | 100.0% | 94.4% |
| PF00877.26 | NLPC_P60 | 28.2 | 2.10e-06 | 88.5% | 84.8% |
D2
high
residues 159-256
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7aj9A01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.63 | 38.0 | 4.49e-01 | 96.9% | 89.6% |
| 4c2dA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.56 | 43.0 | 4.59e-01 | 92.9% | 94.1% |
| 2ikbC00 | 1.20.141.10 | Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 | 0.54 | 43.0 | 3.60e-01 | 83.7% | 73.9% |
| 1pi3A01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.51 | 44.0 | 3.72e-01 | 100.0% | 94.9% |
| 2ay1A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 33.0 | 3.17e-01 | 99.0% | 56.5% |
| 3mebA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 36.0 | 3.42e-01 | 99.0% | 62.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3349141 | 375.1.1.182 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7086 | 0.52 | 43.0 | 3.88e-01 | 91.8% | 92.1% |
| 4013288 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.51 | 37.0 | 3.38e-01 | 77.6% | 79.7% |
| 4553393 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.51 | 26.0 | 3.25e-01 | 73.5% | 81.8% |