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NC_031014.1__YP_009279553.1__BI052_gp31__00031
Bact-VirNC_031014.1__YP_009279553.1__BI052_gp31__00031
Identity
- Accession:
- NC_031014 ↗
- Kingdom:
- phage
Quality
73.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autonotataviridae›
Bifseptvirus›
Pseudomonas_phage_Andromeda
TaxID: 1873949
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 203-250
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ko4A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.59 | 46.0 | 3.64e-01 | 87.5% | 83.2% |
| 5tcsA01 | 1.10.418.30 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Ncd80 complex, Ncd80 subunit | 0.57 | 45.0 | 3.49e-01 | 87.5% | 86.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2790548 | 109.4.1.48 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 57.0 | 3.10e-01 | 91.7% | 8.2% |
| 1406630 | 109.4.1.125 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CRM1_C | 0.70 | 58.0 | 3.39e-01 | 93.8% | 18.5% |
| 3298844 | 103.11.1.1 ↗ | alpha arrays › RuvA-C › RMI1 N-terminal helical domain-related › RMI1 N-terminal helical domain-related › RMI1_N_N | 0.65 | 44.0 | 4.15e-01 | 70.8% | 60.0% |
| 3540634 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.63 | 50.0 | 3.63e-01 | 87.5% | 38.5% |
| 3867936 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.60 | 51.0 | 3.18e-01 | 100.0% | 68.8% |
D2
medium
residues 62-201
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xvhB00 | 1.20.120.1850 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Ebh helix bundles repeating unit (S and A modules) | 0.59 | 39.0 | 4.25e-01 | 88.6% | 79.7% |
| 5yixA00 | 1.10.601.10 | Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor | 0.57 | 46.0 | 3.51e-01 | 85.7% | 93.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3487846 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.59 | 37.0 | 3.72e-01 | 97.1% | 62.1% |
| 4968704 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.56 | 39.0 | 4.07e-01 | 80.0% | 76.9% |