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NC_031020.1__YP_009279916.1__BI036_gp059__00059

Bact-Vir

NC_031020.1__YP_009279916.1__BI036_gp059__00059

Identity

Accession:
NC_031020 ↗
Kingdom:
phage

Quality

69.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-122
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24187.2 best DUF7415 39.0 9.90e-10 39.4% 84.9%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1td6A02 3.30.1790.10 Alpha Beta › 2-Layer Sandwich › hypothetical protein mp506/mpn330, domain 2 › hypothetical protein mp506/mpn330, domain 2 0.55 32.0 3.43e-01 80.8% 64.1%
7kw0A02 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.52 38.0 3.31e-01 77.9% 92.6%
1f8wA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 31.0 2.67e-01 97.1% 36.5%
5hvmA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 43.0 3.50e-01 96.2% 77.9%
5nusA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.50 35.0 2.83e-01 72.1% 82.5%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4305218 375.6.1.1 few secondary structure elements › Rubredoxin-like › FlhC-like › FlhC-like › FlhC 0.58 23.0 3.37e-01 79.8% 100.0%
4655 4980.1.1.1 alpha superhelices › Middle domain of Hypothetical protein MPN330 › Middle domain of Hypothetical protein MPN330 › Middle domain of Hypothetical protein MPN330 › DUF3196 0.55 32.0 3.43e-01 80.8% 64.1%
4019941 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.53 39.0 3.05e-01 80.8% 86.9%
4539730 7558.1.1.0 a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase 0.52 39.0 3.06e-01 77.9% 75.9%
4618205 604.1.1.150 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF28954 0.52 38.0 3.64e-01 76.9% 95.0%
3401287 603.2.1.12 alpha bundles › STAT-like › STAT › STAT › 7tm_7 0.52 36.0 2.44e-01 73.1% 53.9%
3506749 633.21.1.23 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 0.51 38.0 3.28e-01 78.8% 74.5%
4386701 310.2.1.35 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › PF28954 0.51 37.0 3.37e-01 77.9% 83.4%
3172619 109.4.1.371 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RTP1_C1 0.50 38.0 2.34e-01 82.7% 17.1%