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NC_031020.1__YP_009280033.1__BI036_gp219__00176

Bact-Vir

NC_031020.1__YP_009280033.1__BI036_gp219__00176

Identity

Accession:
NC_031020 ↗
Kingdom:
phage

Quality

75.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Gualtarvirus› Morganella_phage_vB_MmoM_MP1

TaxID: 1852628

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-82
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d82A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.75 51.0 4.25e-01 71.2% 93.1%
2grgA01 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.67 59.0 5.28e-01 100.0% 86.7%
7yh1A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.67 59.0 4.76e-01 100.0% 72.8%
2j3wC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.67 58.0 4.49e-01 100.0% 56.3%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.63 40.0 3.73e-01 100.0% 53.5%
1skoA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.62 53.0 4.31e-01 100.0% 69.7%
5x6vF00 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.61 52.0 4.24e-01 100.0% 69.5%
4xpmB00 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.60 51.0 4.93e-01 100.0% 97.0%
3tw6D02 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.60 44.0 4.15e-01 81.4% 77.6%
6ctzA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 36.0 3.08e-01 100.0% 38.7%
3r7wB02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.59 49.0 4.07e-01 100.0% 69.5%
6j7xC01 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.58 51.0 3.88e-01 100.0% 57.1%
2e3nA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 47.0 3.18e-01 91.5% 79.7%
3cueB00 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.57 43.0 3.29e-01 88.1% 54.5%
1zylA01 3.30.200.70 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.57 37.0 3.51e-01 100.0% 55.7%
2mouA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 44.0 3.05e-01 88.1% 76.8%
2v7sA00 3.30.2030.20 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.56 44.0 3.24e-01 88.1% 70.4%
4mchA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.56 41.0 2.68e-01 78.0% 22.6%
4uoiC00 3.30.160.890 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C 0.56 36.0 3.87e-01 100.0% 78.4%
1kyfA01 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.55 37.0 2.93e-01 71.2% 32.8%
3ttgA00 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.55 46.0 2.94e-01 100.0% 55.8%
5mx4A00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.54 38.0 2.57e-01 74.6% 24.0%
1q1gA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.54 39.0 2.56e-01 76.3% 22.2%
4i5tB00 3.30.428.70 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › ATP adenylyltransferase 0.54 45.0 2.96e-01 100.0% 65.2%
3frnA01 3.10.129.70 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.54 40.0 3.24e-01 86.4% 77.0%
4s21B02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 45.0 3.73e-01 100.0% 67.2%
6fopA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.54 42.0 2.90e-01 89.8% 68.6%
1ykdB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.53 43.0 3.20e-01 100.0% 56.1%
4r2xD00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.53 42.0 2.73e-01 86.4% 25.3%
1shyB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 44.0 2.63e-01 96.6% 99.8%
1wmiA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.51 41.0 3.72e-01 94.9% 89.8%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5072327 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.70 62.0 4.74e-01 100.0% 54.1%
5051614 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.68 59.0 4.69e-01 100.0% 58.4%
3623755 223.2.1.16 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › LAMTOR5 0.68 56.0 4.63e-01 96.6% 70.4%
6883 223.5.1.1 ↗ a+b three layers › Profilin-like › YNR034W-A-like › YNR034W-A-like › YNR034W-A-like 0.67 59.0 5.00e-01 100.0% 73.5%
5048994 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.67 57.0 4.63e-01 100.0% 65.0%
5047185 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.66 58.0 4.46e-01 100.0% 55.2%
5073130 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.66 58.0 4.68e-01 100.0% 75.4%
3183393 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.66 56.0 4.89e-01 100.0% 91.6%
3620218 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 57.0 5.03e-01 100.0% 88.8%
5000843 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 57.0 4.63e-01 100.0% 73.9%
4997112 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 56.0 4.38e-01 98.3% 54.6%
3927907 223.2.1.16 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › LAMTOR5 0.65 55.0 4.90e-01 96.6% 95.3%
5072371 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 55.0 4.75e-01 100.0% 74.0%
4947218 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 56.0 4.57e-01 100.0% 76.3%
3507450 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.64 56.0 4.44e-01 100.0% 66.4%
3639196 3256.1.1.0 ↗ a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.64 42.0 4.61e-01 98.3% 81.6%
3924796 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.64 55.0 4.52e-01 100.0% 70.4%
5018021 223.1.1.54 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › CHASE4 0.64 55.0 3.69e-01 100.0% 90.6%
4943458 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 53.0 4.27e-01 100.0% 66.2%
4944411 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 54.0 4.20e-01 98.3% 54.1%
4947055 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 51.0 4.02e-01 94.9% 61.4%
3265738 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.62 53.0 4.27e-01 100.0% 70.4%
4002901 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.62 54.0 4.15e-01 100.0% 60.0%
5048741 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 53.0 4.41e-01 100.0% 64.5%
5049789 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 52.0 4.17e-01 100.0% 59.2%
5024071 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 52.0 4.29e-01 100.0% 65.2%
4943690 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 51.0 3.98e-01 100.0% 53.1%
5071935 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 51.0 4.07e-01 98.3% 53.1%
5071762 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 52.0 4.18e-01 100.0% 59.2%
3926548 2484.1.1.145 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 0.61 50.0 3.21e-01 93.2% 24.9%
4979823 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 51.0 4.41e-01 100.0% 74.0%
5051623 223.2.1.20 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_1 0.60 51.0 4.06e-01 100.0% 55.4%
3249304 223.2.1.19 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.60 51.0 3.92e-01 100.0% 55.3%
3886048 223.2.1.3 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.60 51.0 3.87e-01 100.0% 48.1%
4251848 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 50.0 3.88e-01 98.3% 56.6%
3209968 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.60 42.0 2.48e-01 100.0% 10.6%
3897014 223.2.1.3 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.59 50.0 4.54e-01 98.3% 84.7%
4964823 101.1.2.929 ↗ alpha arrays › HTH › HTH › winged helix domain › HVO_2833_C 0.59 41.0 2.83e-01 74.6% 33.9%
4024044 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 50.0 4.23e-01 100.0% 73.1%
5047389 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 48.0 3.87e-01 98.3% 56.2%
3366962 1205.2.1.1 ↗ a+b two layers › C-terminal domain of CdiA toxin › C-terminal domain of P. aeruginosa CdiA › C-terminal domain of P. aeruginosa CdiA › PF31217 0.58 49.0 4.07e-01 96.6% 73.6%
3964082 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.58 47.0 3.64e-01 91.5% 42.1%
5046979 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 48.0 4.06e-01 98.3% 65.5%
5047816 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 48.0 3.84e-01 100.0% 55.6%
5050992 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 47.0 3.88e-01 98.3% 58.9%
3628286 223.2.1.33 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.58 47.0 3.86e-01 100.0% 63.1%
3790530 223.2.1.36 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_3 0.57 46.0 3.84e-01 96.6% 76.7%
4944328 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 45.0 3.69e-01 94.9% 60.0%
3240374 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.57 50.0 3.16e-01 100.0% 93.5%
3174821 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.57 50.0 3.12e-01 98.3% 99.7%
3953238 3513.1.1.2 ↗ a+b two layers › Putative lipoprotein LppA › Putative lipoprotein LppA › Putative lipoprotein LppA › LppA 0.57 44.0 3.36e-01 88.1% 76.0%
3243115 331.3.1.3 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.56 45.0 3.12e-01 91.5% 74.2%
1087598 2011.2.1.1 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 0.56 41.0 2.70e-01 78.0% 23.3%
5071765 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 44.0 3.68e-01 96.6% 60.0%
5051686 873.1.1.0 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.55 41.0 3.34e-01 88.1% 68.7%
4012940 3887.1.1.0 ↗ a+b two layers › Yeast killer toxin-like › Yeast killer toxin-like › Yeast killer toxin-like 0.54 47.0 3.95e-01 96.6% 100.0%
3234900 331.3.1.3 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.53 40.0 2.78e-01 86.4% 73.6%
4482585 206.1.1.11 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.53 41.0 2.71e-01 89.8% 62.6%
3361883 1205.2.1.1 ↗ a+b two layers › C-terminal domain of CdiA toxin › C-terminal domain of P. aeruginosa CdiA › C-terminal domain of P. aeruginosa CdiA › PF31217 0.50 38.0 3.33e-01 84.7% 77.9%