Back to structures

NC_031034.1__YP_009282170.1__SALINJAH_216__00216

Bact-Vir

NC_031034.1__YP_009282170.1__SALINJAH_216__00216

Identity

Accession:
NC_031034 ↗
Kingdom:
phage

Quality

94.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-62
PDB
Domain cluster: representative
CATH (78)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.95 77.0 7.03e-01 85.0% 68.0%
1wleA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.94 88.0 6.91e-01 100.0% 60.5%
3u0cA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.93 87.0 6.27e-01 100.0% 40.4%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.93 86.0 7.33e-01 98.3% 64.8%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.92 87.0 8.01e-01 100.0% 82.2%
1jkvA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.92 86.0 5.75e-01 100.0% 30.5%
3vkgA12 1.10.287.2610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.91 85.0 5.58e-01 100.0% 29.8%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.91 80.0 8.20e-01 95.0% 100.0%
5y06A01 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.91 84.0 5.46e-01 100.0% 42.8%
2e9xA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.90 81.0 6.09e-01 100.0% 44.5%
4b6xA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.90 84.0 7.97e-01 100.0% 91.3%
1nt2B02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.90 83.0 8.00e-01 100.0% 94.0%
4wpeA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.90 84.0 5.23e-01 100.0% 21.8%
2qywA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.89 83.0 6.97e-01 100.0% 63.2%
2rkhA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.89 79.0 7.24e-01 95.0% 75.0%
4fvmA06 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.89 67.0 7.48e-01 80.0% 100.0%
2crbA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.89 79.0 6.63e-01 100.0% 59.8%
1rq0A01 6.10.140.160 Special › Helix non-globular › Helix Hairpins › 0.89 78.0 6.86e-01 93.3% 69.9%
2oh3A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.88 79.0 5.81e-01 100.0% 40.3%
3na7A00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.88 82.0 5.29e-01 100.0% 25.3%
3unoE00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.88 80.0 5.67e-01 100.0% 37.7%
2qf9A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.88 79.0 5.70e-01 98.3% 38.5%
1sg2A00 3.30.910.20 Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain 0.88 80.0 5.96e-01 100.0% 42.6%
3b2eF00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.88 81.0 8.08e-01 100.0% 100.0%
2r9iA00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.87 79.0 7.47e-01 98.3% 83.1%
2cazD00 6.10.140.820 Special › Helix non-globular › Helix Hairpins › 0.87 78.0 7.86e-01 100.0% 96.7%
5jrcA00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.87 61.0 4.19e-01 100.0% 23.7%
2ke4A00 6.10.140.470 Special › Helix non-globular › Helix Hairpins › 0.87 79.0 6.65e-01 100.0% 64.3%
4ijjB00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.87 73.0 5.53e-01 90.0% 61.5%
7zo9A01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.86 80.0 4.90e-01 100.0% 19.5%
3m7gA02 1.10.8.1010 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.86 76.0 6.45e-01 98.3% 61.1%
3a98A02 1.20.1270.350 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain 0.85 72.0 6.26e-01 90.0% 63.2%
1k04A02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.85 76.0 6.29e-01 100.0% 57.7%
6tqfA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.84 75.0 4.53e-01 100.0% 23.3%
4dmvA01 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.84 68.0 5.99e-01 93.3% 61.2%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.84 77.0 6.33e-01 100.0% 61.8%
2cazC00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.84 70.0 6.90e-01 91.7% 84.4%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.84 79.0 6.71e-01 100.0% 66.7%
2lm9A00 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.84 75.0 6.37e-01 100.0% 63.5%
1ni3A03 1.10.150.300 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain 0.83 69.0 5.96e-01 90.0% 60.4%
4gczA03 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.83 71.0 6.97e-01 100.0% 89.2%
4biuE01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.82 70.0 5.95e-01 95.0% 69.4%
2hh7A00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.82 72.0 6.35e-01 96.7% 72.9%
8fbnB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.82 73.0 4.89e-01 100.0% 31.5%
2bvlA01 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.82 65.0 5.71e-01 90.0% 59.3%
3e0sA00 1.40.20.10 Mainly Alpha › Alpha solenoid › CHAD domain › CHAD domain 0.81 70.0 4.43e-01 100.0% 19.6%
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.80 73.0 6.57e-01 100.0% 78.8%
2qr4A01 1.20.140.70 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Oligopeptidase f, N-terminal domain 0.80 71.0 5.20e-01 100.0% 38.5%
3pltA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.80 71.0 4.81e-01 100.0% 28.0%
2q1kA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.79 63.0 6.69e-01 86.7% 100.0%
4fppB01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.79 72.0 6.77e-01 100.0% 85.9%
6bl6B01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.79 72.0 4.47e-01 100.0% 52.2%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.78 65.0 6.32e-01 91.7% 92.4%
1pd3A00 1.10.287.230 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.78 61.0 6.42e-01 85.0% 100.0%
7metA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.78 65.0 4.09e-01 100.0% 18.1%
2dnxA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 67.0 5.29e-01 100.0% 57.7%
1a36A04 1.10.132.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.75 65.0 4.71e-01 100.0% 33.7%
2rd0B00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.75 64.0 5.01e-01 100.0% 56.1%
4i0xG00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.75 64.0 6.18e-01 100.0% 86.8%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.75 65.0 6.30e-01 100.0% 91.0%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 62.0 6.15e-01 96.7% 100.0%
5j1hA01 1.20.58.1060 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 62.0 4.46e-01 100.0% 32.4%
1h7cA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 62.0 5.24e-01 96.7% 84.5%
1sj8A02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.73 63.0 5.11e-01 100.0% 49.2%
7sgrA02 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.73 63.0 4.02e-01 100.0% 20.0%
4e4eA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.73 63.0 6.04e-01 100.0% 85.9%
4mrsA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.72 61.0 3.84e-01 100.0% 17.3%
3ce2A01 1.20.140.70 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Oligopeptidase f, N-terminal domain 0.72 62.0 4.70e-01 100.0% 39.6%
2rp4A00 6.10.280.60 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain 0.72 53.0 5.08e-01 83.3% 67.6%
2bdeA03 1.20.58.1160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 61.0 5.71e-01 100.0% 80.5%
3txsC01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.72 61.0 5.72e-01 100.0% 77.3%
4dciA00 6.10.140.1110 Special › Helix non-globular › Helix Hairpins › 0.71 63.0 4.76e-01 100.0% 43.5%
4gzrB00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.69 58.0 5.47e-01 100.0% 79.2%
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.68 59.0 5.69e-01 100.0% 91.2%
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 54.0 5.53e-01 93.3% 93.1%
4h63H01 1.20.58.1710 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 54.0 5.22e-01 98.3% 81.9%
2mpkA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.64 54.0 5.07e-01 95.0% 85.1%
2f2gA00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.63 57.0 3.86e-01 100.0% 51.6%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4983118 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.97 93.0 7.67e-01 100.0% 77.9%
4963973 1203.1.2.0 alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 0.97 92.0 6.36e-01 100.0% 43.5%
3737505 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.96 92.0 8.38e-01 100.0% 98.7%
3412777 109.4.1.150 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ufd2P_core 0.96 91.0 4.94e-01 100.0% 6.9%
3875643 109.4.1.150 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ufd2P_core 0.95 90.0 4.88e-01 100.0% 6.9%
4345287 4006.1.1.1 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.95 89.0 7.26e-01 98.3% 59.0%
4945931 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.95 90.0 8.47e-01 100.0% 85.7%
4956566 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.95 90.0 7.83e-01 100.0% 70.6%
4032165 4006.1.1.1 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.95 88.0 7.20e-01 98.3% 59.0%
4024277 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.94 89.0 8.14e-01 100.0% 98.7%
3712648 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.94 89.0 5.97e-01 100.0% 31.6%
3657123 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.94 89.0 7.39e-01 100.0% 77.9%
3614078 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.94 88.0 6.79e-01 100.0% 50.0%
4955780 3939.1.1.387 alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › DUF4349 0.94 89.0 8.61e-01 100.0% 92.3%
3965569 150.1.1.183 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Transposase_20 0.94 89.0 6.04e-01 100.0% 33.3%
5042020 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.94 89.0 7.53e-01 100.0% 66.7%
3543972 109.4.1.1348 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_7, TPR_10, TPR_12 0.94 88.0 4.96e-01 100.0% 10.8%
3693881 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.94 88.0 8.29e-01 100.0% 85.7%
4112797 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.93 88.0 5.91e-01 100.0% 30.8%
4092397 109.4.1.1448 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_7, TPR_10, TPR_12, TPR_MalT 0.93 88.0 5.05e-01 100.0% 12.9%
4406698 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.93 89.0 7.37e-01 100.0% 63.2%
3559003 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.93 88.0 7.22e-01 100.0% 60.0%
3273862 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.93 87.0 7.31e-01 100.0% 77.9%
3776400 192.5.1.1 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 0.93 88.0 7.81e-01 100.0% 75.0%
3247204 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.93 88.0 8.83e-01 100.0% 100.0%
3917888 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.93 88.0 6.84e-01 100.0% 52.2%
3484694 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.93 88.0 5.28e-01 100.0% 18.2%
4175684 3291.1.1.232 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Paralemmin 0.93 87.0 6.56e-01 100.0% 46.2%
5011532 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.93 87.0 7.29e-01 100.0% 77.9%
4219218 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.93 87.0 6.92e-01 100.0% 54.5%
5048590 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.93 87.0 6.90e-01 100.0% 54.5%
3520009 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.93 87.0 7.77e-01 100.0% 75.0%
3699098 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.92 87.0 7.76e-01 100.0% 75.0%
3925849 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.92 86.0 5.68e-01 100.0% 27.9%
4965632 192.7.1.85 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › DUF4349 0.92 87.0 8.45e-01 100.0% 92.3%
4247116 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.92 87.0 6.89e-01 100.0% 54.5%
4041347 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.92 87.0 6.88e-01 100.0% 54.5%
4177393 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.92 86.0 6.28e-01 100.0% 41.4%
3864054 192.10.1.0 alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain 0.92 85.0 6.53e-01 100.0% 48.0%
4422869 4006.1.1.1 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.92 86.0 7.09e-01 100.0% 60.0%
4384750 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.92 86.0 7.21e-01 100.0% 63.2%
4219465 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.92 86.0 6.84e-01 100.0% 54.5%
4142346 5086.1.1.87 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING 0.91 85.0 6.77e-01 100.0% 60.9%
4163282 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.91 85.0 5.78e-01 100.0% 32.4%
3911171 192.7.1.44 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › SHCBP_N 0.91 85.0 7.27e-01 100.0% 70.0%
4674 192.7.1.1 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB 0.91 80.0 7.79e-01 100.0% 87.7%
4129936 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.91 84.0 6.99e-01 100.0% 62.1%
3973453 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.90 84.0 7.53e-01 100.0% 83.7%
3849009 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.90 84.0 5.31e-01 100.0% 25.4%
2814930 150.1.1.14 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › EncFtn-like 0.90 84.0 7.44e-01 100.0% 73.5%
3923798 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.90 84.0 5.43e-01 100.0% 25.5%
3692897 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.90 84.0 7.69e-01 100.0% 80.0%
3550436 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.90 84.0 6.81e-01 100.0% 57.7%
3875814 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.90 84.0 5.07e-01 100.0% 17.4%
4446039 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.90 83.0 7.83e-01 98.3% 84.3%
5020818 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.90 84.0 4.80e-01 100.0% 12.4%
4988623 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.90 84.0 5.27e-01 100.0% 22.6%
3291561 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.90 81.0 7.48e-01 98.3% 78.7%
3926706 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.89 83.0 6.84e-01 100.0% 60.0%
2394365 1189.1.1.0 alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor 0.89 82.0 7.47e-01 100.0% 76.9%
3167235 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.89 82.0 5.85e-01 100.0% 37.5%
3939746 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.89 83.0 5.75e-01 100.0% 34.3%
3487846 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.89 83.0 6.04e-01 100.0% 41.4%
3570403 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.89 81.0 6.26e-01 100.0% 48.0%
3255249 3939.1.1.0 alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.88 82.0 6.15e-01 100.0% 44.4%
3934585 3755.3.1.465 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A 0.88 81.0 5.92e-01 100.0% 40.0%
3684015 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.88 80.0 6.69e-01 100.0% 60.0%
4775818 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.88 82.0 5.56e-01 100.0% 31.6%
3788782 2004.1.1.199 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B 0.88 83.0 4.70e-01 100.0% 11.7%
3520611 3291.1.1.1 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 0.87 80.0 5.53e-01 100.0% 32.4%
3169544 3922.1.1.138 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Utp11 0.87 82.0 5.77e-01 100.0% 37.5%
4655883 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.87 79.0 6.60e-01 100.0% 60.0%
4030407 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.87 77.0 7.05e-01 95.0% 76.0%
4030256 603.2.1.0 alpha bundles › STAT-like › STAT › STAT 0.86 79.0 6.70e-01 100.0% 63.2%
4636267 101.1.2.311 alpha arrays › HTH › HTH › winged helix domain › RNA12 0.86 71.0 5.14e-01 90.0% 38.1%
3417096 3939.1.1.0 alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.85 78.0 6.27e-01 100.0% 55.5%
4414254 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.85 79.0 4.92e-01 100.0% 21.4%
3787585 5086.1.1.87 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING 0.85 70.0 5.70e-01 100.0% 50.5%
3930842 4177.1.1.10 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › GMIP-like_FCH 0.84 75.0 4.71e-01 100.0% 20.3%
3635408 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.82 74.0 5.56e-01 100.0% 42.9%
4102446 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.82 72.0 4.95e-01 100.0% 29.8%
3661727 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.81 72.0 4.93e-01 100.0% 35.1%
3750261 192.8.1.421 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF4745 0.79 71.0 5.42e-01 100.0% 44.4%
3595707 5086.1.1.118 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › BBS2_hp 0.78 65.0 5.11e-01 100.0% 43.8%
3739286 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.78 68.0 4.57e-01 100.0% 49.1%
5049144 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 68.0 4.51e-01 100.0% 37.3%
3731062 3826.1.1.0 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.76 68.0 6.05e-01 100.0% 70.6%
4003222 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.75 64.0 5.54e-01 100.0% 61.0%
3830738 2004.1.1.480 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 0.70 58.0 3.56e-01 100.0% 14.6%