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NC_031034.1__YP_009282242.1__SALINJAH_288__00288

Bact-Vir

NC_031034.1__YP_009282242.1__SALINJAH_288__00288

Identity

Accession:
NC_031034 ↗
Kingdom:
phage

Quality

85.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-89
PDB
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.86 52.0 6.41e-01 92.2% 96.0%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.77 55.0 6.01e-01 93.5% 91.9%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 50.0 5.68e-01 85.7% 89.7%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 51.0 5.84e-01 87.0% 96.4%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.72 45.0 5.40e-01 85.7% 100.0%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.72 60.0 6.05e-01 100.0% 89.6%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 46.0 5.37e-01 89.6% 96.2%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 51.0 5.35e-01 97.4% 85.3%
1rvjH02 3.90.50.10 Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 0.70 51.0 4.27e-01 98.7% 44.7%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 52.0 5.40e-01 92.2% 84.7%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 47.0 5.17e-01 87.0% 90.3%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 5.76e-01 98.7% 97.2%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.67 50.0 5.41e-01 89.6% 96.8%
7c9rH01 3.90.50.10 Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 0.67 51.0 4.14e-01 98.7% 42.6%
2budA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 53.0 5.02e-01 96.1% 72.8%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.66 44.0 4.81e-01 76.6% 82.8%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 4.96e-01 97.4% 72.8%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 49.0 5.28e-01 97.4% 98.4%
1iy9A02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.65 42.0 4.97e-01 76.6% 98.1%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.65 42.0 4.77e-01 88.3% 91.1%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 5.14e-01 98.7% 100.0%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.65 42.0 4.79e-01 76.6% 91.1%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 51.0 5.31e-01 97.4% 94.3%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 47.0 5.15e-01 84.4% 100.0%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 49.0 5.30e-01 90.9% 100.0%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 47.0 5.14e-01 92.2% 100.0%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 42.0 4.70e-01 92.2% 96.4%
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.62 42.0 4.72e-01 88.3% 91.5%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 49.0 5.09e-01 87.0% 92.9%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 49.0 5.19e-01 92.2% 100.0%
3pe0A03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 46.0 4.93e-01 96.1% 96.9%
3agjF01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.62 54.0 4.64e-01 100.0% 71.7%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 46.0 4.91e-01 85.7% 95.5%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 46.0 4.96e-01 83.1% 100.0%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 45.0 4.49e-01 89.6% 80.8%
2b2cA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.59 43.0 4.65e-01 88.3% 92.2%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 40.0 4.29e-01 74.0% 81.8%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 46.0 4.81e-01 83.1% 91.4%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 44.0 4.64e-01 87.0% 92.4%
2vgeA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.59 50.0 3.75e-01 97.4% 47.8%
6ijfC01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.58 41.0 3.93e-01 100.0% 62.4%
1m1fB00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.58 48.0 4.34e-01 90.9% 81.9%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 45.0 4.79e-01 89.6% 98.5%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 47.0 3.74e-01 98.7% 51.4%
3ab1A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 49.0 4.19e-01 98.7% 90.5%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 43.0 4.59e-01 88.3% 100.0%
3h7oB01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 45.0 4.02e-01 97.4% 69.9%
3q9tA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 45.0 3.17e-01 96.1% 56.5%
6toaE01 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.52 37.0 3.54e-01 77.9% 79.6%
3qwmA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 38.0 3.30e-01 80.5% 60.6%
4z24A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 45.0 2.89e-01 97.4% 60.5%
3cp7B02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 38.0 3.55e-01 98.7% 61.0%
1qftB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.41e-01 97.4% 75.7%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.51 42.0 3.08e-01 93.5% 84.5%
1xhnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 40.0 3.20e-01 89.6% 86.7%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5080336 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 67.0 7.30e-01 100.0% 98.4%
5027750 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 54.0 6.36e-01 85.7% 90.9%
4139090 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.84 55.0 6.50e-01 90.9% 94.5%
5029405 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.84 55.0 6.50e-01 90.9% 94.5%
4400642 4.1.1.257 beta barrels › SH3 › SH3 › SH3 › Flag1_repress 0.83 64.0 6.16e-01 100.0% 72.9%
4540843 4.1.1.434 beta barrels › SH3 › SH3 › SH3 › DUF2642 0.81 60.0 6.51e-01 100.0% 92.3%
3968342 4.1.1.45 beta barrels › SH3 › SH3 › SH3 › DUF903 0.80 53.0 6.24e-01 85.7% 98.1%
5053906 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.80 57.0 6.42e-01 94.8% 95.0%
5000741 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.80 62.0 6.68e-01 100.0% 95.4%
25624 4.1.1.45 beta barrels › SH3 › SH3 › SH3 › DUF903 0.79 52.0 6.18e-01 85.7% 100.0%
135648 4.1.1.142 beta barrels › SH3 › SH3 › SH3 › Hfq_1 0.79 61.0 6.56e-01 98.7% 95.4%
5056826 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.78 57.0 6.16e-01 97.4% 89.2%
4982354 4.7.1.0 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.77 59.0 6.39e-01 93.5% 95.4%
4971470 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.75 60.0 6.09e-01 100.0% 86.7%
5031673 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 67.0 6.02e-01 98.7% 78.1%
4044269 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.73 58.0 6.03e-01 100.0% 91.4%
4071824 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.73 61.0 6.25e-01 100.0% 92.0%
5050320 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.73 58.0 5.90e-01 100.0% 86.7%
3616769 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.72 56.0 5.24e-01 98.7% 67.4%
4979291 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.72 58.0 5.88e-01 100.0% 88.0%
322883 4.6.1.1 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.70 51.0 3.65e-01 98.7% 26.2%
5073368 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 53.0 5.51e-01 93.5% 88.6%
5061147 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 62.0 5.80e-01 100.0% 78.9%
3586469 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.69 55.0 5.32e-01 100.0% 77.6%
4674170 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.68 59.0 5.13e-01 100.0% 62.5%
3650798 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 59.0 5.25e-01 100.0% 96.5%
3741020 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 50.0 5.20e-01 98.7% 87.1%
4400596 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.67 59.0 4.66e-01 100.0% 47.5%
4643742 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 59.0 5.76e-01 100.0% 94.1%
5043533 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 51.0 5.55e-01 97.4% 100.0%
3450257 4.1.1.150 beta barrels › SH3 › SH3 › SH3 › DUF3123 0.66 55.0 5.17e-01 93.5% 73.7%
3781383 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 51.0 4.87e-01 98.7% 72.2%
4993396 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.66 57.0 3.89e-01 100.0% 32.5%
3810562 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 54.0 5.48e-01 100.0% 92.0%
3485745 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 47.0 5.18e-01 84.4% 98.3%
3422338 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.64 39.0 3.66e-01 81.8% 50.5%
3474075 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 48.0 4.97e-01 83.1% 83.8%
4003181 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 47.0 5.22e-01 84.4% 100.0%
3422852 4.1.1.85 beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel 0.64 50.0 4.30e-01 85.7% 76.8%
3234923 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.63 47.0 5.15e-01 85.7% 96.8%
4607738 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.63 54.0 4.83e-01 100.0% 68.2%
3563220 4.1.1.220 beta barrels › SH3 › SH3 › SH3 › BAHCC1-like_Tudor 0.63 49.0 4.86e-01 100.0% 82.5%
3243188 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 55.0 5.60e-01 98.7% 100.0%
3624306 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.61 54.0 4.62e-01 100.0% 88.0%
3798523 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 49.0 4.86e-01 87.0% 97.5%
4542692 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 54.0 5.27e-01 100.0% 92.9%
3907176 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.61 52.0 5.03e-01 98.7% 92.2%
4093354 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 48.0 4.97e-01 87.0% 97.1%
4990487 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.60 46.0 4.85e-01 84.4% 90.0%
3670468 4.1.1.332 beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 0.60 53.0 4.50e-01 100.0% 65.4%
4055974 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.60 53.0 4.56e-01 100.0% 68.0%
3765502 4.1.1.50 beta barrels › SH3 › SH3 › SH3 › MIB_HERC2 0.60 51.0 4.71e-01 94.8% 73.0%
3659671 4.25.1.0 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.60 48.0 4.95e-01 100.0% 100.0%
3025579 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 44.0 4.79e-01 85.7% 100.0%
3770804 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 52.0 5.04e-01 98.7% 94.1%
3194005 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.59 45.0 4.57e-01 83.1% 84.0%
3520216 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.58 46.0 4.80e-01 87.0% 97.1%
3770803 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.58 50.0 4.55e-01 100.0% 72.7%
3900733 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.58 43.0 4.53e-01 84.4% 88.6%
4018455 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.58 44.0 2.95e-01 84.4% 20.7%
4291404 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 45.0 4.59e-01 85.7% 92.0%
3409888 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.57 50.0 3.48e-01 100.0% 58.5%
3586385 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 39.0 4.34e-01 71.4% 100.0%
3241736 9.1.1.48 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_10 0.56 45.0 3.40e-01 88.3% 59.5%
3842363 1.1.5.76 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT 0.56 47.0 4.29e-01 100.0% 73.6%
5023617 4111.1.1.2 a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.56 49.0 4.13e-01 100.0% 60.7%
4203446 1.1.5.57 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 0.55 45.0 2.76e-01 88.3% 49.7%
3954857 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.54 47.0 4.38e-01 100.0% 82.7%
3940060 4004.1.1.6 beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › Pacs-1 0.54 45.0 3.72e-01 100.0% 75.0%
3704471 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 45.0 4.25e-01 89.6% 96.7%
3219729 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.54 46.0 3.24e-01 100.0% 65.0%
3936663 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.54 46.0 4.03e-01 100.0% 76.0%
3974873 219.1.1.35 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › SpvD 0.54 47.0 3.48e-01 100.0% 42.4%
3478042 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 42.0 3.68e-01 87.0% 78.3%
3907134 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.52 44.0 3.19e-01 94.8% 80.9%
3472806 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.52 44.0 3.19e-01 100.0% 68.1%
3594081 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 39.0 3.92e-01 84.4% 96.2%
3276425 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.51 40.0 2.83e-01 100.0% 24.3%