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NC_031035.1__YP_009282290.1__SEA_GENGAR_45__00044

Bact-Vir

NC_031035.1__YP_009282290.1__SEA_GENGAR_45__00044

Identity

Accession:
NC_031035 ↗
Kingdom:
phage

Quality

82.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kratiovirus› Mycobacterium_phage_Gengar

TaxID: 1891963

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 40-129
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y1xB00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.64 51.0 4.10e-01 85.6% 59.2%
1hqvA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.64 51.0 4.09e-01 86.7% 57.3%
1ij5A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.63 50.0 4.43e-01 85.6% 76.3%
5jolA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.63 46.0 4.86e-01 77.8% 97.6%
1tizA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.62 44.0 4.96e-01 88.9% 100.0%
2kbiA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.62 47.0 5.01e-01 88.9% 91.1%
2i7aA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.62 50.0 4.16e-01 86.7% 77.1%
1wlmA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.62 52.0 5.01e-01 91.1% 95.1%
4c0kA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.61 53.0 5.18e-01 100.0% 100.0%
3k21A02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.60 41.0 4.60e-01 87.8% 94.1%
6ocxA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 46.0 3.88e-01 85.6% 51.6%
2aaoB00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 50.0 4.42e-01 98.9% 65.5%
4f0zB00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 43.0 3.64e-01 83.3% 46.5%
1s1eA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 48.0 3.90e-01 94.4% 97.2%
6yigA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 47.0 4.74e-01 88.9% 100.0%
6yetA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 50.0 4.99e-01 95.6% 98.9%
3mseB00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 41.0 3.37e-01 77.8% 40.5%
3akaA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 44.0 3.64e-01 83.3% 46.3%
1b4cA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 42.0 4.26e-01 78.9% 84.8%
2r2iA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 44.0 4.53e-01 87.8% 96.6%
4ygbB00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 38.0 4.28e-01 73.3% 100.0%
1qlsA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 44.0 4.32e-01 85.6% 83.2%
5v89A01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 43.0 4.36e-01 88.9% 87.5%
2m7lA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 47.0 4.85e-01 98.9% 100.0%
4i5jA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 46.0 3.86e-01 93.3% 57.3%
1v1gA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 48.0 3.82e-01 98.9% 92.6%
1a75A00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.54 39.0 3.78e-01 77.8% 68.9%
1oyiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 36.0 4.06e-01 73.3% 98.4%
2be4A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.54 43.0 4.34e-01 90.0% 87.5%
3to7A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 36.0 3.73e-01 91.1% 74.1%
1bjfA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 44.0 4.44e-01 91.1% 100.0%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 39.0 3.88e-01 88.9% 75.3%
2ccmA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 44.0 3.58e-01 96.7% 88.9%
1oltA02 1.10.10.920 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.53 36.0 3.77e-01 71.1% 87.7%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.73e-01 88.9% 72.2%
5w1aB02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 36.0 4.04e-01 75.6% 100.0%
3htuA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.93e-01 73.3% 96.0%
4mvfA03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 43.0 3.57e-01 100.0% 47.7%
1bbyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 33.0 3.61e-01 87.8% 81.2%
2g7rA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.52 36.0 3.72e-01 98.9% 74.4%
3kheA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 44.0 4.17e-01 100.0% 79.4%
2sasA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 44.0 3.59e-01 96.7% 97.8%
2becA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 44.0 3.62e-01 97.8% 95.6%
7ewfB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 36.0 3.79e-01 73.3% 97.3%
7wboA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.51 42.0 3.46e-01 93.3% 50.6%
2e6wA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.51 42.0 4.21e-01 95.6% 96.9%
2hpsA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.51 43.0 3.54e-01 100.0% 98.4%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3797006 108.1.1.96 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.70 48.0 5.42e-01 71.1% 95.7%
3561131 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.67 55.0 4.74e-01 87.8% 80.7%
4127245 152.1.2.1 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6 0.65 35.0 4.07e-01 100.0% 72.3%
3486838 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.65 48.0 4.97e-01 78.9% 87.1%
3392315 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.63 46.0 4.44e-01 77.8% 72.4%
3633346 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.63 49.0 4.94e-01 83.3% 87.8%
3490393 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.63 47.0 4.96e-01 78.9% 95.0%
3878587 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.62 50.0 5.20e-01 85.6% 96.5%
3564333 108.1.1.42 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › CAPN13-like_C_EFh 0.62 50.0 3.93e-01 86.7% 66.7%
3211612 108.1.1.98 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.62 54.0 4.59e-01 98.9% 61.9%
3705880 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.62 51.0 5.24e-01 88.9% 97.6%
3907843 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.62 47.0 4.77e-01 81.1% 91.1%
3692801 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.62 53.0 4.68e-01 94.4% 94.7%
3720113 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.62 50.0 5.06e-01 87.8% 90.0%
3743320 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.61 54.0 4.82e-01 98.9% 94.6%
3610225 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.61 49.0 3.54e-01 86.7% 89.6%
3629936 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.61 47.0 4.81e-01 80.0% 92.9%
4000007 108.1.1.146 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › PF30344 0.61 46.0 4.60e-01 82.2% 84.2%
3601224 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.60 41.0 4.29e-01 71.1% 84.7%
3591225 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.60 46.0 4.51e-01 82.2% 85.0%
3885920 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.60 50.0 3.95e-01 92.2% 49.7%
3703848 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.60 52.0 4.68e-01 98.9% 96.2%
3532811 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.59 50.0 4.71e-01 95.6% 77.3%
3405289 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.59 44.0 4.84e-01 80.0% 100.0%
4602758 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.59 50.0 3.85e-01 97.8% 96.4%
3881921 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.58 46.0 4.83e-01 88.9% 95.0%
3704112 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.58 48.0 4.64e-01 94.4% 87.6%
3610212 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.57 49.0 4.74e-01 96.7% 90.0%
3705429 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.57 44.0 4.48e-01 90.0% 85.6%
3887760 108.1.1.99 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.57 48.0 4.66e-01 95.6% 92.0%
3702346 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.57 44.0 3.99e-01 90.0% 59.2%
3415127 108.1.1.28 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.57 47.0 4.85e-01 93.3% 95.3%
3863452 108.1.1.107 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7, EF-hand_8 0.57 46.0 4.64e-01 91.1% 100.0%
None — 0.57 49.0 3.09e-01 100.0% 17.6%
3483351 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.56 38.0 4.04e-01 71.1% 80.0%
3879126 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.56 45.0 4.55e-01 91.1% 100.0%
3559803 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.56 49.0 4.35e-01 97.8% 91.5%
3596836 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.56 48.0 4.69e-01 98.9% 95.0%
3336326 108.1.1.98 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.56 40.0 4.24e-01 76.7% 90.0%
3600665 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.56 47.0 4.44e-01 95.6% 90.0%
3492843 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.56 38.0 4.01e-01 71.1% 80.0%
3531386 108.1.1.26 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 0.55 44.0 3.90e-01 95.6% 59.2%
3635114 108.1.1.28 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.55 40.0 4.30e-01 75.6% 90.7%
3493997 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.55 35.0 3.85e-01 87.8% 78.7%
3184700 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.55 41.0 4.42e-01 86.7% 94.7%
3569524 108.1.1.48 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_9 0.55 43.0 4.55e-01 85.6% 95.0%
3528821 108.1.1.96 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.55 46.0 4.54e-01 95.6% 95.8%
3607637 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.54 47.0 4.73e-01 98.9% 100.0%
3895123 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.54 44.0 4.50e-01 92.2% 97.8%
3252785 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.54 48.0 3.91e-01 100.0% 71.4%
4027264 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.53 46.0 3.36e-01 95.6% 62.4%
4347605 108.1.1.96 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.53 44.0 4.45e-01 91.1% 94.3%
3391943 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.53 40.0 3.99e-01 82.2% 84.2%
3793751 108.1.1.107 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7, EF-hand_8 0.53 43.0 4.41e-01 96.7% 95.3%
3580220 108.1.1.103 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6, EF-hand_7, EF-hand_8 0.53 43.0 3.46e-01 96.7% 45.0%
3317564 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.52 39.0 3.53e-01 81.1% 60.8%
3184976 108.1.1.114 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_6, EF-hand_7 0.52 44.0 3.56e-01 96.7% 64.7%
3665515 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.52 42.0 4.22e-01 93.3% 88.9%
3687434 108.1.1.46 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › Caleosin 0.52 36.0 3.45e-01 72.2% 67.6%
4028068 3871.1.1.1 ↗ alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN 0.51 36.0 3.15e-01 73.3% 83.6%
3821073 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.51 41.0 3.64e-01 90.0% 71.1%
3229485 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.50 43.0 3.47e-01 97.8% 94.2%
3661026 108.1.1.46 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › Caleosin 0.50 37.0 3.71e-01 77.8% 81.1%
3444225 108.1.1.28 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.50 39.0 4.06e-01 93.3% 91.8%