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NC_031039.1__YP_009282975.1__BI022_gp070__00070

Bact-Vir

NC_031039.1__YP_009282975.1__BI022_gp070__00070

Identity

Accession:
NC_031039 ↗
Kingdom:
phage

Quality

81.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Takahashivirus› Bacillus_phage_AR9

TaxID: 1815509

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-87
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wgrA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 39.0 3.67e-01 97.1% 52.4%
1o5lA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 39.0 3.21e-01 100.0% 36.4%
4ecnA02 2.60.40.3540 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 0.58 41.0 3.45e-01 100.0% 42.6%
3d33A00 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 39.0 3.55e-01 100.0% 51.1%
4d7pA00 2.60.40.730 Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain 0.57 40.0 3.66e-01 100.0% 53.1%
1t3yA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.57 34.0 2.80e-01 98.5% 29.8%
2qcsB02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 37.0 3.10e-01 100.0% 36.8%
1nlqE00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.56 39.0 3.50e-01 100.0% 51.0%
7pzaA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 35.0 3.00e-01 100.0% 37.7%
1wfuA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 40.0 3.56e-01 100.0% 57.9%
3eipA00 3.10.50.20 Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein 0.52 44.0 4.22e-01 100.0% 92.9%
4r3dA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.52 39.0 3.24e-01 95.6% 42.3%
5cvmA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 45.0 2.97e-01 100.0% 23.7%
2v72A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 35.0 2.87e-01 100.0% 35.0%
3hrgA01 3.30.420.250 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, N-terminal domain 0.51 38.0 3.08e-01 100.0% 39.2%
2gfoA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 44.0 2.85e-01 100.0% 21.8%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4151900 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.65 47.0 3.73e-01 100.0% 36.8%
5049794 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.64 49.0 3.82e-01 100.0% 38.6%
3604593 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 47.0 5.06e-01 100.0% 98.2%
5054505 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.57 48.0 4.50e-01 100.0% 97.8%
3773390 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.54 38.0 2.93e-01 100.0% 30.0%
3809139 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.52 43.0 4.20e-01 91.2% 100.0%
3738021 304.8.1.105 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF30953 0.51 39.0 3.32e-01 97.1% 48.3%
3598159 224.1.1.0 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.51 32.0 2.74e-01 98.5% 32.6%