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NC_031054.1__YP_009285213.1__BIZ88_gp271__00271
Bact-VirNC_031054.1__YP_009285213.1__BIZ88_gp271__00271
Identity
- Accession:
- NC_031054 ↗
- Kingdom:
- phage
Quality
70.6
mean pLDDT
Taxonomy
TaxID: 1873999
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-64
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k49A00 | 2.30.29.80 | Mainly Beta › Roll › PH-domain like › | 0.66 | 57.0 | 4.65e-01 | 100.0% | 64.4% |
| 4s39A02 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.65 | 44.0 | 3.62e-01 | 71.2% | 56.0% |
| 4bf2A02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.62 | 47.0 | 3.43e-01 | 84.7% | 60.2% |
| 4epkB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.61 | 43.0 | 2.69e-01 | 74.6% | 17.6% |
| 2eo6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 40.0 | 3.38e-01 | 71.2% | 50.9% |
| 1a8lA02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.59 | 40.0 | 3.43e-01 | 71.2% | 88.7% |
| 2fkiA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.59 | 40.0 | 3.23e-01 | 76.3% | 35.6% |
| 1whnA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 44.0 | 3.74e-01 | 81.4% | 85.1% |
| 4wfsA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 48.0 | 3.31e-01 | 94.9% | 42.3% |
| 3au4A04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 48.0 | 4.25e-01 | 100.0% | 87.1% |
| 3k1lA02 | 3.30.457.30 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.57 | 31.0 | 2.76e-01 | 74.6% | 33.3% |
| 4iapA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 47.0 | 4.20e-01 | 100.0% | 92.4% |
| 3qokA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.56 | 39.0 | 3.34e-01 | 72.9% | 96.9% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 38.0 | 2.93e-01 | 76.3% | 29.9% |
| 4hdoA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 46.0 | 4.08e-01 | 100.0% | 90.2% |
| 2vseA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.54 | 40.0 | 3.17e-01 | 83.1% | 90.1% |
| 2mnjB00 | 2.60.40.4160 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 45.0 | 4.05e-01 | 98.3% | 73.9% |
| 6ks6Z01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.54 | 44.0 | 3.00e-01 | 100.0% | 63.2% |
| 2gnxA02 | 3.30.450.240 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.53 | 44.0 | 3.75e-01 | 100.0% | 93.6% |
| 5bulA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 37.0 | 2.31e-01 | 74.6% | 82.4% |
| 2gumB01 | 2.30.30.1230 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 38.0 | 3.37e-01 | 81.4% | 77.0% |
| 6yleA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 36.0 | 2.25e-01 | 71.2% | 85.2% |
| 4c92A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 36.0 | 2.83e-01 | 71.2% | 53.8% |
| 3f42A00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.53 | 35.0 | 3.10e-01 | 96.6% | 44.1% |
| 3rv0B03 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 41.0 | 3.82e-01 | 88.1% | 84.8% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.53 | 39.0 | 4.04e-01 | 98.3% | 87.7% |
| 5jh8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.52 | 36.0 | 3.47e-01 | 71.2% | 83.6% |
| 3sqiA02 | 1.10.443.20 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Centromere DNA-binding protein complex CBF3 subunit, domain 2 | 0.52 | 41.0 | 2.83e-01 | 100.0% | 43.4% |
| 6i8wB01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 43.0 | 2.82e-01 | 100.0% | 25.1% |
| 3unbF00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.52 | 41.0 | 2.78e-01 | 100.0% | 22.1% |
| 1whrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.51 | 43.0 | 3.53e-01 | 100.0% | 75.0% |
| 2x3lA01 | 3.90.1150.150 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.51 | 36.0 | 3.02e-01 | 74.6% | 63.8% |
| 1yuaA01 | 3.30.65.10 | Alpha Beta › 2-Layer Sandwich › Bacterial Topoisomerase I; domain 1 › Bacterial Topoisomerase I, domain 1 | 0.51 | 34.0 | 3.33e-01 | 78.0% | 62.5% |
| 3we5A00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.51 | 36.0 | 2.93e-01 | 81.4% | 51.8% |
| 3mx7A00 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 36.0 | 3.20e-01 | 76.3% | 74.4% |
| 2gw6A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.51 | 38.0 | 3.06e-01 | 98.3% | 41.4% |
| 3ijmA00 | 3.90.1570.20 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.51 | 35.0 | 2.76e-01 | 74.6% | 78.8% |
| 2mtzA02 | 2.40.440.10 | Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like | 0.50 | 41.0 | 3.45e-01 | 100.0% | 80.7% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4336618 | 301.13.1.3 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › FakA-like_C | 0.75 | 53.0 | 4.31e-01 | 74.6% | 50.0% |
| 3351647 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.67 | 46.0 | 3.62e-01 | 71.2% | 63.3% |
| 4583884 | 296.1.1.3 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 | 0.65 | 44.0 | 3.51e-01 | 71.2% | 52.0% |
| 3975926 | 2.4.1.17 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › DUF7765 | 0.65 | 49.0 | 4.39e-01 | 83.1% | 72.9% |
| 4108971 | 296.1.1.3 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 | 0.64 | 43.0 | 3.56e-01 | 71.2% | 56.5% |
| 5059922 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 55.0 | 4.78e-01 | 100.0% | 89.5% |
| 3335997 | 5.3.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop | 0.63 | 44.0 | 3.41e-01 | 72.9% | 67.7% |
| 3370535 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.63 | 44.0 | 3.46e-01 | 72.9% | 76.8% |
| 3272546 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.63 | 55.0 | 4.36e-01 | 100.0% | 82.4% |
| 5027344 | 1170.1.1.0 ↗ | beta barrels › IL8-related › IL8-related › IL8 | 0.63 | 48.0 | 4.92e-01 | 98.3% | 89.1% |
| 3689524 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.62 | 43.0 | 2.61e-01 | 100.0% | 10.8% |
| 4970044 | 3518.1.1.1 ↗ | a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind | 0.61 | 42.0 | 3.09e-01 | 74.6% | 44.9% |
| 4996608 | 2007.9.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 | 0.61 | 46.0 | 3.32e-01 | 100.0% | 26.0% |
| 3510148 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.60 | 51.0 | 4.06e-01 | 100.0% | 70.0% |
| 3923930 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.60 | 51.0 | 4.25e-01 | 100.0% | 80.9% |
| 3627795 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 51.0 | 4.58e-01 | 98.3% | 77.6% |
| 3945055 | 2484.2.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain › Methyltransf_1N | 0.60 | 41.0 | 3.68e-01 | 72.9% | 51.8% |
| 5047010 | 2008.1.1.63 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › MvaI_BcnI | 0.59 | 51.0 | 3.50e-01 | 100.0% | 57.8% |
| 3792816 | 220.1.1.33 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 | 0.59 | 49.0 | 4.03e-01 | 100.0% | 74.2% |
| 3483784 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.58 | 41.0 | 3.49e-01 | 74.6% | 65.7% |
| 3601319 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.58 | 49.0 | 2.88e-01 | 100.0% | 62.3% |
| 3936608 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 47.0 | 4.06e-01 | 100.0% | 93.6% |
| 3272167 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 48.0 | 3.16e-01 | 98.3% | 54.8% |
| 5073130 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.57 | 49.0 | 4.01e-01 | 98.3% | 88.6% |
| 5078006 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.57 | 44.0 | 4.20e-01 | 83.1% | 75.7% |
| 3167802 | 220.1.1.33 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 | 0.57 | 47.0 | 4.04e-01 | 100.0% | 82.4% |
| 3238141 | 2002.1.1.56 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus | 0.57 | 49.0 | 3.06e-01 | 94.9% | 39.7% |
| 4236240 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.57 | 37.0 | 3.20e-01 | 100.0% | 42.1% |
| 1684841 | 241.13.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › SopD | 0.56 | 39.0 | 3.49e-01 | 72.9% | 71.8% |
| 3734376 | 220.1.1.33 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 | 0.56 | 46.0 | 3.93e-01 | 100.0% | 81.8% |
| 1204325 | 2004.1.1.195 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C | 0.56 | 37.0 | 2.26e-01 | 100.0% | 9.6% |
| 3244890 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 45.0 | 3.79e-01 | 100.0% | 77.5% |
| 5004341 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.56 | 38.0 | 2.28e-01 | 74.6% | 16.8% |
| 4677652 | 2004.1.1.1017 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12, UvrD_C | 0.55 | 40.0 | 2.56e-01 | 76.3% | 64.5% |
| 3579495 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.55 | 40.0 | 2.50e-01 | 78.0% | 90.6% |
| 4959767 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.55 | 43.0 | 4.29e-01 | 83.1% | 88.3% |
| 4984000 | 231.1.1.1 ↗ | a+b two layers › MocoBD/DmpA-related › MocoBD/DmpA-related › Molybdenum cofactor-binding domain › MoCoBD_1 | 0.55 | 42.0 | 2.46e-01 | 83.1% | 10.1% |
| 3259572 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 44.0 | 3.44e-01 | 100.0% | 70.3% |
| 3974974 | 241.13.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › SopD | 0.54 | 41.0 | 3.30e-01 | 83.1% | 85.0% |
| 3310916 | 5069.1.1.55 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF1218 | 0.54 | 38.0 | 2.83e-01 | 76.3% | 67.1% |
| 3979087 | 4100.1.1.7 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › PF27115 | 0.54 | 37.0 | 3.60e-01 | 74.6% | 64.3% |
| 3927052 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.54 | 44.0 | 3.66e-01 | 96.6% | 60.0% |
| 4928052 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.53 | 37.0 | 2.33e-01 | 100.0% | 12.9% |
| 3219936 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.53 | 38.0 | 2.43e-01 | 79.7% | 79.6% |
| 5061128 | 2003.1.2.40 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored | 0.53 | 36.0 | 2.25e-01 | 72.9% | 81.8% |
| 4945408 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 44.0 | 3.65e-01 | 100.0% | 83.3% |
| 3721847 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.53 | 43.0 | 2.49e-01 | 93.2% | 90.8% |
| 4336160 | 319.1.1.21 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › GvpH | 0.53 | 43.0 | 4.02e-01 | 98.3% | 80.0% |
| 3352485 | 2007.5.1.17 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase | 0.52 | 38.0 | 2.59e-01 | 83.1% | 22.7% |
| 4943155 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 43.0 | 3.56e-01 | 100.0% | 83.3% |
| 5048237 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.51 | 43.0 | 3.50e-01 | 100.0% | 82.3% |
| 5068015 | 319.1.1.4 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 | 0.51 | 42.0 | 4.00e-01 | 98.3% | 84.0% |
| 3466109 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.51 | 43.0 | 2.75e-01 | 98.3% | 43.3% |
| 3652035 | 601.16.1.8 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › DUF1218 | 0.51 | 37.0 | 2.59e-01 | 83.1% | 25.7% |
| 8017 | 375.1.1.38 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Topo_Zn_Ribbon | 0.51 | 34.0 | 3.32e-01 | 78.0% | 61.5% |
| 3260311 | 10.1.1.8 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY | 0.51 | 41.0 | 2.48e-01 | 100.0% | 15.4% |
| 4937436 | 2005.1.1.17 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f | 0.51 | 40.0 | 2.68e-01 | 100.0% | 19.6% |
| 3938847 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.50 | 39.0 | 2.36e-01 | 86.4% | 16.9% |
| 3492862 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.50 | 34.0 | 2.48e-01 | 71.2% | 36.0% |
| 3990414 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.50 | 34.0 | 2.76e-01 | 74.6% | 42.9% |
D2
high
residues 261-379
Domain cluster:
rep: ON366411.1__USL89399.1__vBBceHLY2_00123__00123__D173-286
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.70 | 32.0 | 3.63e-01 | 73.9% | 54.7% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.69 | 32.0 | 3.37e-01 | 71.4% | 47.2% |
| 2eenA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.67 | 40.0 | 3.48e-01 | 84.0% | 39.5% |
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.66 | 36.0 | 4.00e-01 | 91.6% | 67.4% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 34.0 | 4.18e-01 | 85.7% | 86.7% |
| 2g30A02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.60 | 31.0 | 3.23e-01 | 77.3% | 50.9% |
| 2hq9B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 40.0 | 3.85e-01 | 70.6% | 88.3% |
| 5yjlD01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 43.0 | 4.05e-01 | 77.3% | 78.9% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 34.0 | 3.17e-01 | 77.3% | 48.6% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 43.0 | 4.33e-01 | 80.7% | 94.3% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.55 | 35.0 | 4.20e-01 | 95.0% | 98.7% |
| 3jvaA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 37.0 | 3.79e-01 | 71.4% | 96.5% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 27.0 | 3.66e-01 | 75.6% | 95.2% |
| 4h5bA00 | 3.30.1460.70 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 41.0 | 3.83e-01 | 89.1% | 67.1% |
| 2oztA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 40.0 | 4.10e-01 | 84.9% | 98.3% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3940149 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.72 | 43.0 | 4.95e-01 | 89.1% | 80.0% |
| 5014272 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.67 | 37.0 | 4.71e-01 | 83.2% | 92.9% |
| 5044451 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 35.0 | 4.18e-01 | 80.7% | 76.2% |
| 3593405 | 897.1.1.0 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 | 0.65 | 42.0 | 3.69e-01 | 88.2% | 45.3% |
| 4957055 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.63 | 30.0 | 3.72e-01 | 73.9% | 70.7% |
| 3459135 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.61 | 33.0 | 3.41e-01 | 83.2% | 53.6% |
| 4026594 | 331.9.1.2 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C | 0.59 | 32.0 | 3.22e-01 | 78.2% | 50.8% |
| 1891431 | 9.1.1.28 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Pallilysin | 0.59 | 32.0 | 3.22e-01 | 84.0% | 48.0% |
| 4629131 | 9.29.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › VirK › VirK › VirK | 0.56 | 36.0 | 3.63e-01 | 95.8% | 62.6% |
| 1841031 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.56 | 35.0 | 3.91e-01 | 79.0% | 80.6% |
| 3599881 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.55 | 31.0 | 2.97e-01 | 70.6% | 44.8% |
| 3334339 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.54 | 47.0 | 3.64e-01 | 93.3% | 86.3% |
| 3439646 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.52 | 33.0 | 3.47e-01 | 73.1% | 71.4% |
| 4030163 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.51 | 41.0 | 4.32e-01 | 93.3% | 96.2% |
| 3668772 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.51 | 36.0 | 3.20e-01 | 88.2% | 51.2% |
| 3526787 | 213.1.1.6 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ | 0.51 | 35.0 | 3.43e-01 | 73.1% | 65.4% |
| 4024178 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.50 | 46.0 | 3.15e-01 | 99.2% | 56.2% |
D3
medium
residues 72-195
D4
medium
residues 196-255