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NC_031056.1__YP_009285342.1__Blue_030__00030

Bact-Vir

NC_031056.1__YP_009285342.1__Blue_030__00030

Identity

Accession:
NC_031056 ↗
Kingdom:
phage

Quality

93.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-108
PDB
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3rt0C00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 43.0 3.68e-01 76.0% 79.7%
3cnwA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 41.0 3.76e-01 79.8% 92.9%
3p9vA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 40.0 3.52e-01 78.8% 88.6%
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.54 45.0 3.87e-01 93.3% 75.3%
4jhyA00 3.30.530.80 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.53 41.0 3.54e-01 79.8% 91.0%
2kwbA00 2.170.150.10 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A 0.53 44.0 3.71e-01 92.3% 97.8%
3klxB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 41.0 3.48e-01 83.7% 93.9%
1ul7A00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.53 39.0 4.02e-01 78.8% 86.3%
5nfiB02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 36.0 3.37e-01 70.2% 97.0%
3k1lA02 3.30.457.30 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.53 36.0 3.89e-01 96.2% 83.3%
3cbfA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 39.0 3.30e-01 79.8% 80.6%
2nwvA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.52 38.0 3.74e-01 86.5% 72.3%
2kf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 38.0 3.35e-01 80.8% 81.4%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.50 43.0 3.99e-01 95.2% 75.6%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4352841 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.64 35.0 3.98e-01 75.0% 70.0%
3964033 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.61 29.0 3.95e-01 100.0% 92.0%
3336175 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.60 45.0 3.73e-01 79.8% 88.4%
4054539 325.1.7.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 0.60 34.0 3.78e-01 76.0% 71.2%
3281107 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.59 44.0 3.99e-01 79.8% 96.6%
3272765 809.1.1.0 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.57 42.0 4.35e-01 89.4% 84.2%
3511079 708.1.2.1 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › TCTP 0.56 47.0 4.23e-01 93.3% 100.0%
4008870 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.52 44.0 3.04e-01 95.2% 93.3%
185584 3385.1.1.1 beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 › AltA1 0.52 37.0 3.51e-01 76.0% 90.8%
3636133 2.1.1.81 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1 0.51 44.0 4.22e-01 92.3% 93.3%
4838661 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.50 33.0 3.27e-01 93.3% 63.3%