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NC_031056.1__YP_009285372.1__Blue_060__00060

Bact-Vir

NC_031056.1__YP_009285372.1__Blue_060__00060

Identity

Accession:
NC_031056 ↗
Kingdom:
phage

Quality

78.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-43
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7kznP01 3.30.740.10 Alpha Beta › 2-Layer Sandwich › Protein Inhibitor Of Neuronal Nitric Oxide Synthase › Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 0.80 65.0 5.04e-01 92.9% 41.9%
2q74A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.77 65.0 4.67e-01 100.0% 34.1%
4evxA00 1.10.1740.240 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.77 67.0 5.12e-01 100.0% 47.4%
2e62A01 6.10.140.420 Special › Helix non-globular › Helix Hairpins › 0.74 60.0 5.76e-01 100.0% 78.8%
2f93B00 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.71 62.0 5.83e-01 100.0% 80.4%
1grjA01 1.10.287.180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain 0.67 53.0 4.49e-01 90.5% 51.4%
5vjhB03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 52.0 3.37e-01 92.9% 17.4%
3q1pA01 6.10.250.1120 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.67 50.0 5.14e-01 83.3% 87.2%
1dt9A01 3.30.960.10 Alpha Beta › 2-Layer Sandwich › Translation, Eukaryotic Peptide Chain Release Factor Subunit 1; Chain A › eRF1 domain 1 0.67 52.0 3.93e-01 97.6% 35.2%
4gzrC00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.63 54.0 4.85e-01 100.0% 98.4%
1n69B00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.63 47.0 4.07e-01 100.0% 48.8%
2lf0A01 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.62 54.0 4.84e-01 100.0% 73.3%
1t16A00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.57 47.0 2.78e-01 100.0% 34.9%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3723053 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.78 66.0 4.02e-01 100.0% 16.1%
3682257 284.1.3.9 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › WLM 0.71 55.0 4.46e-01 95.2% 43.3%