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NC_031062.2__YP_009286199.1__FROZEN_78__00070
Bact-VirNC_031062.2__YP_009286199.1__FROZEN_78__00070
Identity
- Accession:
- NC_031062 ↗
- Kingdom:
- phage
Quality
88.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Schitoviridae›
Johnsonvirus›
Erwinia_phage_vB_EamP_Frozen
TaxID: 1852641
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-55
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cgqA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.66 | 56.0 | 5.17e-01 | 98.2% | 86.5% |
| 7qv0F01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.65 | 55.0 | 4.89e-01 | 98.2% | 82.7% |
| 2n50A00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.63 | 54.0 | 4.84e-01 | 100.0% | 81.0% |
| 1irxA05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 52.0 | 4.39e-01 | 94.5% | 74.2% |
| 5c0yA02 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.62 | 45.0 | 3.87e-01 | 78.2% | 68.8% |
| 4neoA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.61 | 50.0 | 4.51e-01 | 98.2% | 74.7% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 39.0 | 3.84e-01 | 83.6% | 62.1% |
| 1qd1B02 | 3.30.70.670 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Formiminotransferase, C-terminal subdomain | 0.58 | 50.0 | 3.71e-01 | 98.2% | 71.7% |
| 2pmyA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.57 | 44.0 | 4.04e-01 | 85.5% | 67.1% |
| 4p98A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 40.0 | 3.03e-01 | 76.4% | 71.5% |
| 2p6vA00 | 1.20.120.1110 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › TAFH/NHR1 domain | 0.56 | 44.0 | 3.83e-01 | 96.4% | 62.9% |
| 2b8iA00 | 1.20.1280.100 | Mainly Alpha › Up-down Bundle › Monooxygenase › Pas factor, saposin domain | 0.55 | 41.0 | 3.83e-01 | 89.1% | 80.5% |
| 1ck7A01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.55 | 42.0 | 2.85e-01 | 89.1% | 59.6% |
| 4up8A02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 43.0 | 2.66e-01 | 98.2% | 84.2% |
| 1q2lA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.53 | 44.0 | 2.98e-01 | 94.5% | 48.2% |
| 3lp5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 40.0 | 2.67e-01 | 81.8% | 38.4% |
| 1a41A02 | 1.20.120.380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 | 0.53 | 40.0 | 3.55e-01 | 90.9% | 75.5% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 46.0 | 4.57e-01 | 94.5% | 94.6% |
| 1o7fA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 41.0 | 3.19e-01 | 98.2% | 81.3% |
| 2byvE03 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 41.0 | 3.08e-01 | 98.2% | 68.7% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4027294 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.65 | 53.0 | 4.84e-01 | 92.7% | 84.0% |
| 5027340 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.63 | 45.0 | 3.83e-01 | 76.4% | 70.0% |
| 3243667 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 48.0 | 4.33e-01 | 87.3% | 96.2% |
| 4660104 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 48.0 | 4.65e-01 | 89.1% | 76.9% |
| 3350169 | 632.10.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Coronavirus NSP7-like › Coronavirus NSP7-like | 0.61 | 47.0 | 4.48e-01 | 83.6% | 75.4% |
| 4490196 | 108.1.1.207 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › PF30486 | 0.61 | 51.0 | 4.54e-01 | 92.7% | 85.0% |
| 4194924 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.60 | 52.0 | 4.55e-01 | 100.0% | 90.6% |
| 3916871 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.58 | 48.0 | 3.65e-01 | 98.2% | 85.5% |
| 4513921 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.58 | 41.0 | 4.05e-01 | 81.8% | 71.7% |
| 3477131 | 101.1.1.227 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_NOL4_2nd | 0.57 | 40.0 | 3.84e-01 | 78.2% | 71.4% |
| None | — | 0.57 | 47.0 | 3.20e-01 | 100.0% | 61.7% | |
| 3494269 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.56 | 44.0 | 2.83e-01 | 98.2% | 34.8% |
| 3492558 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.56 | 45.0 | 3.51e-01 | 98.2% | 93.1% |
| None | — | 0.56 | 43.0 | 2.77e-01 | 87.3% | 17.4% | |
| 3492160 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.56 | 44.0 | 3.41e-01 | 98.2% | 80.0% |
| 3352560 | 2484.1.1.110 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE | 0.55 | 43.0 | 2.74e-01 | 89.1% | 15.9% |
| 3779679 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.55 | 43.0 | 2.82e-01 | 98.2% | 35.6% |
| 3532264 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.55 | 44.0 | 3.35e-01 | 98.2% | 78.7% |
| 4029664 | 108.1.1.12 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › p25-alpha | 0.54 | 43.0 | 3.77e-01 | 96.4% | 68.4% |
| 3997378 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.53 | 41.0 | 3.38e-01 | 98.2% | 87.7% |
| 3581518 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.52 | 40.0 | 3.25e-01 | 98.2% | 78.6% |