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NC_031080.1__YP_009288044.1__BI081_gp176__00180
Bact-VirNC_031080.1__YP_009288044.1__BI081_gp176__00180
Identity
- Accession:
- NC_031080 ↗
- Kingdom:
- phage
Quality
90.0
mean pLDDT
Taxonomy
TaxID: 1891703
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-58
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u89A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.88 | 72.0 | 5.30e-01 | 91.4% | 36.7% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.82 | 69.0 | 5.62e-01 | 96.6% | 50.0% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.80 | 67.0 | 6.11e-01 | 96.6% | 70.1% |
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.80 | 59.0 | 5.33e-01 | 79.3% | 57.7% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.80 | 70.0 | 6.17e-01 | 100.0% | 67.1% |
| 3bvoA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.79 | 59.0 | 5.10e-01 | 79.3% | 62.8% |
| 4jvtA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.78 | 51.0 | 5.88e-01 | 70.7% | 97.6% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.76 | 62.0 | 5.22e-01 | 87.9% | 55.8% |
| 4fd4A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.76 | 52.0 | 3.44e-01 | 74.1% | 19.3% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.76 | 63.0 | 5.85e-01 | 100.0% | 73.3% |
| 1xjaB00 | 2.60.120.280 | Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC | 0.75 | 51.0 | 3.80e-01 | 74.1% | 27.3% |
| 1vw4L01 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.74 | 49.0 | 3.66e-01 | 74.1% | 28.9% |
| 2oh3A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.74 | 58.0 | 4.30e-01 | 84.5% | 35.4% |
| 4r42A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.74 | 63.0 | 4.41e-01 | 94.8% | 30.5% |
| 3hinA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.73 | 53.0 | 5.45e-01 | 77.6% | 83.6% |
| 1tmxB00 | 2.60.130.10 | Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase | 0.73 | 49.0 | 3.15e-01 | 70.7% | 15.0% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 52.0 | 4.72e-01 | 81.0% | 56.4% |
| 1y6xA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.72 | 51.0 | 4.44e-01 | 81.0% | 49.4% |
| 2ouwB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.63 | 51.0 | 3.83e-01 | 89.7% | 36.8% |
| 1dbhA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.63 | 53.0 | 3.68e-01 | 100.0% | 27.0% |
| 3nz4B03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.59 | 47.0 | 3.94e-01 | 87.9% | 66.3% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3577937 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.94 | 88.0 | 6.82e-01 | 100.0% | 50.4% |
| 5077460 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.93 | 69.0 | 6.47e-01 | 77.6% | 66.2% |
| 3878682 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.91 | 69.0 | 4.51e-01 | 84.5% | 21.9% |
| 3733319 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.91 | 77.0 | 6.00e-01 | 91.4% | 46.1% |
| 3892002 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.90 | 83.0 | 5.94e-01 | 100.0% | 37.4% |
| 4258985 | 4229.1.1.2 ↗ | alpha bundles › Indolic compounds 2,3-dioxygenase-like › Indolic compounds 2,3-dioxygenase-like › Indolic compounds 2,3-dioxygenase-like › Trp_dioxygenase | 0.90 | 71.0 | 4.21e-01 | 82.8% | 16.2% |
| 3989094 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.90 | 72.0 | 6.69e-01 | 86.2% | 70.0% |
| 4950607 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.88 | 78.0 | 5.34e-01 | 98.3% | 30.0% |
| 3414399 | 5086.1.1.106 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF725 | 0.88 | 80.0 | 5.58e-01 | 100.0% | 44.7% |
| 4975245 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.88 | 72.0 | 6.24e-01 | 89.7% | 59.1% |
| 3708696 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.86 | 57.0 | 3.69e-01 | 74.1% | 17.0% |
| 3564110 | 5001.1.1.11 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_4 | 0.86 | 72.0 | 4.41e-01 | 87.9% | 22.7% |
| 5012790 | 7076.1.1.0 ↗ | 0.86 | 66.0 | 6.05e-01 | 82.8% | 65.3% | |
| 3492075 | 3729.1.1.1 ↗ | alpha arrays › Legumain prodomain › Legumain prodomain › Legumain prodomain › Legum_prodom | 0.85 | 75.0 | 5.78e-01 | 96.6% | 45.2% |
| 3553580 | 2484.8.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Separase pseudo-protease domain (PPD) › Separase pseudo-protease domain (PPD) › Peptidase_C50 | 0.84 | 78.0 | 4.96e-01 | 100.0% | 46.8% |
| 3580283 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.84 | 65.0 | 5.61e-01 | 84.5% | 55.3% |
| 3412881 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.84 | 65.0 | 5.79e-01 | 82.8% | 60.0% |
| 4016578 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.84 | 76.0 | 6.18e-01 | 100.0% | 58.1% |
| 3216709 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.84 | 66.0 | 5.67e-01 | 84.5% | 54.4% |
| 4950585 | 632.8.1.34 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › HisKA | 0.82 | 72.0 | 6.70e-01 | 100.0% | 80.8% |
| 3402327 | 3755.3.1.324 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF725 | 0.81 | 74.0 | 5.19e-01 | 100.0% | 78.2% |
| 5071514 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.81 | 58.0 | 5.36e-01 | 75.9% | 61.3% |
| 4016635 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.81 | 71.0 | 5.97e-01 | 100.0% | 58.0% |
| 3605713 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.81 | 63.0 | 5.55e-01 | 89.7% | 57.6% |
| 4034237 | 5055.1.1.0 ↗ | extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel | 0.80 | 70.0 | 5.64e-01 | 100.0% | 50.4% |
| 4041347 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.80 | 71.0 | 5.66e-01 | 96.6% | 51.8% |
| 3409567 | 3755.3.1.324 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF725 | 0.78 | 68.0 | 4.80e-01 | 94.8% | 38.2% |
| 3859811 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.78 | 70.0 | 4.28e-01 | 100.0% | 27.0% |
| 2814929 | 150.1.1.14 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › EncFtn-like | 0.77 | 60.0 | 5.70e-01 | 84.5% | 72.1% |
| 3973453 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.75 | 64.0 | 5.78e-01 | 96.6% | 70.0% |
| 3619577 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.74 | 61.0 | 5.29e-01 | 94.8% | 58.9% |
| 3563871 | 603.1.1.121 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF30821 | 0.74 | 62.0 | 5.08e-01 | 98.3% | 50.4% |
| 4115372 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.73 | 63.0 | 5.15e-01 | 98.3% | 51.8% |
| 5048590 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.73 | 61.0 | 5.03e-01 | 96.6% | 51.8% |
| 4929363 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.72 | 60.0 | 4.90e-01 | 96.6% | 57.4% |
| 3321310 | 603.1.1.5 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N | 0.72 | 61.0 | 4.88e-01 | 100.0% | 47.5% |
| 3614078 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.69 | 59.0 | 4.77e-01 | 100.0% | 48.3% |
| 3574749 | 109.26.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › TPR_Nup160_C, TPR_NUP160_120_M | 0.69 | 48.0 | 2.91e-01 | 72.4% | 11.1% |
| 4120048 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.68 | 49.0 | 3.51e-01 | 75.9% | 26.7% |
| 3224794 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.59 | 44.0 | 4.12e-01 | 82.8% | 73.3% |