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NC_031097.1__YP_009289692.1__SEA_ZIRINKA_32__00032
Bact-VirNC_031097.1__YP_009289692.1__SEA_ZIRINKA_32__00032
Identity
- Accession:
- NC_031097 ↗
- Kingdom:
- phage
Quality
97.0
mean pLDDT
Taxonomy
TaxID: 1887656
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-96
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4kh3A00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.87 | 82.0 | 5.00e-01 | 100.0% | 20.9% |
| 3b4nA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.82 | 76.0 | 5.61e-01 | 100.0% | 71.2% |
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.80 | 73.0 | 6.16e-01 | 100.0% | 70.1% |
| 3bh7B01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.80 | 74.0 | 5.78e-01 | 100.0% | 65.3% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.80 | 73.0 | 6.12e-01 | 100.0% | 70.7% |
| 4w8qA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 65.0 | 4.95e-01 | 100.0% | 65.4% |
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.61 | 53.0 | 5.14e-01 | 97.9% | 93.4% |
| 1w5dA02 | 3.50.80.20 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-Ala-D-Ala carboxypeptidase C, peptidase S13 | 0.50 | 36.0 | 3.57e-01 | 74.7% | 84.3% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3165270 | 207.2.1.10 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pertactin | 0.86 | 80.0 | 5.67e-01 | 100.0% | 51.9% |
| 3459646 | 207.4.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C | 0.82 | 75.0 | 6.12e-01 | 100.0% | 65.1% |
| 3838480 | 207.2.1.83 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › VacA2 | 0.81 | 74.0 | 4.58e-01 | 100.0% | 24.0% |
| 3796564 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.80 | 69.0 | 5.78e-01 | 100.0% | 56.8% |
| 3744798 | 208.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › DUF1720 | 0.80 | 69.0 | 5.85e-01 | 100.0% | 58.7% |
| 2516583 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.80 | 69.0 | 7.10e-01 | 93.7% | 97.8% |
| 4020264 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.80 | 74.0 | 7.16e-01 | 100.0% | 93.3% |
| 3862265 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.79 | 72.0 | 4.28e-01 | 100.0% | 16.3% |
| 5041137 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.79 | 56.0 | 6.40e-01 | 72.6% | 100.0% |
| 3265123 | 207.4.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC | 0.79 | 72.0 | 5.89e-01 | 100.0% | 89.4% |
| 5078879 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.78 | 71.0 | 5.55e-01 | 100.0% | 48.5% |
| 3634222 | 207.4.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C | 0.78 | 71.0 | 5.91e-01 | 100.0% | 68.8% |
| 4971789 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.78 | 70.0 | 6.26e-01 | 100.0% | 71.5% |
| 3722181 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.78 | 71.0 | 6.90e-01 | 100.0% | 93.3% |
| 5005047 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.77 | 71.0 | 6.20e-01 | 100.0% | 75.0% |
| 4929654 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.77 | 70.0 | 4.55e-01 | 100.0% | 24.6% |
| 3391275 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.76 | 66.0 | 6.41e-01 | 100.0% | 84.8% |
| 3305986 | 208.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein | 0.76 | 59.0 | 5.55e-01 | 100.0% | 68.7% |
| 4026564 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.76 | 69.0 | 5.41e-01 | 100.0% | 50.8% |
| 3716374 | 207.4.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC | 0.76 | 68.0 | 5.15e-01 | 100.0% | 52.9% |
| 3926145 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.76 | 68.0 | 5.38e-01 | 100.0% | 56.4% |
| 4320009 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.75 | 61.0 | 4.40e-01 | 86.3% | 87.7% |
| 4097357 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.75 | 60.0 | 4.37e-01 | 86.3% | 76.9% |
| 4929387 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.74 | 52.0 | 5.97e-01 | 76.8% | 100.0% |
| 4968617 | 208.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein | 0.72 | 52.0 | 5.18e-01 | 100.0% | 73.0% |
| 4031089 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.68 | 63.0 | 4.50e-01 | 100.0% | 86.4% |
| 4041561 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.68 | 62.0 | 4.50e-01 | 100.0% | 87.5% |
| 4286724 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.68 | 62.0 | 4.38e-01 | 100.0% | 87.8% |