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NC_031100.1__YP_009289881.1__BI003_gp002__00002

Bact-Vir

NC_031100.1__YP_009289881.1__BI003_gp002__00002

Identity

Accession:
NC_031100 ↗
Kingdom:
phage

Quality

70.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Bequatrovirus› Bacillus_phage_Phrodo

TaxID: 1805953

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 9-92
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.85 53.0 6.11e-01 86.9% 85.5%
3lx7A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 46.0 6.01e-01 100.0% 100.0%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.82 49.0 5.29e-01 91.7% 70.4%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.81 47.0 5.80e-01 90.5% 94.1%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 49.0 5.82e-01 89.3% 91.2%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 46.0 5.17e-01 90.5% 74.2%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 47.0 5.22e-01 100.0% 76.5%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 52.0 4.90e-01 77.4% 60.0%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 50.0 5.57e-01 100.0% 89.2%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 48.0 5.21e-01 70.2% 90.3%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 49.0 5.27e-01 89.3% 84.7%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 48.0 5.18e-01 97.6% 83.3%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 49.0 5.30e-01 73.8% 90.1%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 45.0 5.29e-01 90.5% 96.7%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 46.0 4.81e-01 95.2% 78.2%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 45.0 4.98e-01 92.9% 91.0%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 50.0 5.07e-01 83.3% 84.7%
4qucA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 37.0 4.36e-01 77.4% 85.7%
1vq8T00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 48.0 4.26e-01 97.6% 57.1%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 42.0 4.26e-01 88.1% 71.1%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.61 40.0 4.30e-01 86.9% 82.1%
1vwxY00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 46.0 3.92e-01 96.4% 50.0%
1vx7N01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 51.0 5.16e-01 89.3% 90.6%
2qf4A02 2.40.10.350 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 0.61 40.0 3.92e-01 95.2% 61.5%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.61 43.0 3.81e-01 72.6% 90.0%
4z88A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 45.0 5.00e-01 90.5% 100.0%
3dclA02 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.60 38.0 3.70e-01 97.6% 58.2%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 52.0 4.74e-01 100.0% 76.1%
7k9cA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 49.0 4.95e-01 89.3% 95.3%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 51.0 4.88e-01 96.4% 83.3%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.58 51.0 4.39e-01 97.6% 91.7%
4c92B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 41.0 3.82e-01 97.6% 61.0%
3d3rA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 33.0 3.35e-01 85.7% 60.2%
4mi7A00 3.90.70.170 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.55 40.0 3.54e-01 86.9% 52.4%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.53 41.0 4.38e-01 84.5% 100.0%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.52 40.0 4.16e-01 83.3% 90.8%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 40.0 4.16e-01 97.6% 92.5%
3fvcA03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.50 42.0 3.86e-01 92.9% 78.2%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.50 36.0 3.32e-01 78.6% 90.8%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5042892 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.87 53.0 6.21e-01 88.1% 86.7%
1394554 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.85 53.0 6.02e-01 86.9% 82.8%
4059465 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.84 50.0 5.59e-01 90.5% 75.0%
4932609 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 53.0 5.99e-01 91.7% 83.1%
3504417 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.84 55.0 5.44e-01 73.8% 63.3%
3451175 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 50.0 6.05e-01 89.3% 94.5%
3920026 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.82 53.0 3.83e-01 70.2% 26.2%
3440094 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.82 50.0 5.84e-01 89.3% 86.7%
3486495 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 54.0 4.20e-01 73.8% 33.1%
3415020 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.81 54.0 5.60e-01 73.8% 72.5%
3476179 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 54.0 5.20e-01 73.8% 61.1%
3938261 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.81 54.0 4.39e-01 73.8% 38.7%
3580609 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.80 54.0 6.09e-01 73.8% 90.6%
3251940 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.80 53.0 5.60e-01 100.0% 76.0%
4026282 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 54.0 5.29e-01 75.0% 65.6%
4547820 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 53.0 4.91e-01 73.8% 55.2%
3649839 4.1.1.235 ↗ beta barrels › SH3 › SH3 › SH3 › KOW1_SPT5 0.79 56.0 4.85e-01 73.8% 96.0%
3917568 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 55.0 4.88e-01 77.4% 52.2%
3619215 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 53.0 5.01e-01 73.8% 58.0%
3222146 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.79 53.0 5.91e-01 73.8% 89.2%
4984882 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.79 58.0 6.32e-01 77.4% 92.9%
3756428 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.78 54.0 5.11e-01 72.6% 60.0%
3840677 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 53.0 5.01e-01 77.4% 59.0%
3555930 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.78 55.0 5.94e-01 73.8% 87.1%
3885050 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.78 53.0 4.11e-01 71.4% 33.7%
3821922 4.1.1.299 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, KOW1_SPT5 0.77 55.0 4.74e-01 73.8% 96.8%
3939941 4.1.1.235 ↗ beta barrels › SH3 › SH3 › SH3 › KOW1_SPT5 0.77 55.0 4.67e-01 73.8% 93.8%
3264807 4.1.1.299 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, KOW1_SPT5 0.77 55.0 4.86e-01 73.8% 94.8%
3601190 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 56.0 4.99e-01 77.4% 94.8%
3302816 4.1.1.235 ↗ beta barrels › SH3 › SH3 › SH3 › KOW1_SPT5 0.75 56.0 4.74e-01 77.4% 93.8%
4470603 4.1.1.217 ↗ beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.75 50.0 3.93e-01 71.4% 34.5%
3246086 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 56.0 5.39e-01 78.6% 69.5%
3933047 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.75 48.0 3.83e-01 97.6% 34.4%
146236 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.74 51.0 4.62e-01 92.9% 54.6%
3684907 4.1.1.235 ↗ beta barrels › SH3 › SH3 › SH3 › KOW1_SPT5 0.74 55.0 4.57e-01 77.4% 95.0%
4484893 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 49.0 5.53e-01 70.2% 89.2%
4153457 4.1.1.299 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, KOW1_SPT5 0.73 54.0 4.57e-01 77.4% 94.8%
2126408 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.72 49.0 4.97e-01 100.0% 71.6%
3992688 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.72 50.0 3.92e-01 95.2% 36.4%
3656401 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 51.0 5.37e-01 98.8% 85.3%
3301015 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 47.0 5.32e-01 90.5% 90.8%
3715486 4.1.1.235 ↗ beta barrels › SH3 › SH3 › SH3 › KOW1_SPT5 0.67 61.0 5.25e-01 100.0% 95.4%
5028926 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.67 49.0 4.06e-01 96.4% 45.7%
4168737 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 48.0 5.07e-01 79.8% 85.1%
3328647 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.67 46.0 4.62e-01 85.7% 70.6%
4263339 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.66 49.0 5.09e-01 94.0% 82.5%
4177510 4.1.1.295 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 0.66 53.0 4.54e-01 100.0% 56.8%
3598125 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 45.0 4.72e-01 82.1% 80.0%
3498983 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 49.0 3.09e-01 81.0% 40.2%
3495880 4.1.1.315 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 0.64 48.0 3.04e-01 79.8% 38.1%
4335951 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 44.0 4.70e-01 75.0% 83.6%
4270910 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 44.0 4.70e-01 78.6% 85.7%
5054535 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.63 49.0 4.45e-01 97.6% 61.8%
4854141 4.1.1.295 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 0.63 47.0 4.03e-01 96.4% 50.8%
3598283 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 58.0 4.94e-01 100.0% 80.0%
4027263 4.1.1.104 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.63 59.0 5.12e-01 100.0% 90.8%
5037204 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.63 48.0 4.23e-01 97.6% 56.7%
4279051 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.63 48.0 4.46e-01 97.6% 64.8%
4417349 4.1.1.295 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 0.62 48.0 4.44e-01 97.6% 64.8%
4282868 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 43.0 4.66e-01 75.0% 87.1%
3931905 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 57.0 5.11e-01 100.0% 87.0%
3555931 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.62 57.0 5.09e-01 100.0% 92.2%
4002679 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.62 56.0 4.94e-01 98.8% 95.8%
3476178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 57.0 5.01e-01 100.0% 86.7%
3819340 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.61 57.0 5.00e-01 100.0% 88.3%
4167587 4.1.1.178 ↗ beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 0.61 52.0 5.25e-01 95.2% 89.4%
3296833 4.1.1.300 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C 0.61 57.0 4.73e-01 100.0% 79.0%
3482225 4.1.1.300 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C 0.61 56.0 4.79e-01 100.0% 83.1%
4937910 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.59 50.0 4.28e-01 100.0% 58.5%
4203006 4.1.1.7 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.58 53.0 4.83e-01 98.8% 88.2%
3595283 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 50.0 4.48e-01 92.9% 76.5%
4421229 4.1.1.7 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.57 52.0 4.85e-01 100.0% 93.2%
4994549 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.57 51.0 3.97e-01 100.0% 48.5%
1125239 4.1.1.7 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.56 52.0 4.83e-01 100.0% 93.2%
3176702 219.1.1.115 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.54 45.0 3.69e-01 100.0% 49.7%