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NC_031100.1__YP_009290113.1__BI003_gp234__00234

Bact-Vir

NC_031100.1__YP_009290113.1__BI003_gp234__00234

Identity

Accession:
NC_031100 ↗
Kingdom:
phage

Quality

75.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Bequatrovirus› Bacillus_phage_Phrodo

TaxID: 1805953

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-86
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6ro0D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 55.0 4.90e-01 91.0% 90.9%
7x7zA01 2.40.480.10 Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like 0.65 52.0 4.32e-01 88.5% 92.1%
2vl6A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 54.0 4.75e-01 92.3% 87.5%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 53.0 4.65e-01 93.6% 90.4%
7x36A01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.62 46.0 3.00e-01 78.2% 22.5%
3wa2X01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 46.0 4.46e-01 84.6% 71.3%
3rd4B00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 52.0 5.18e-01 93.6% 97.6%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.61 46.0 3.74e-01 87.2% 41.7%
2qw7C00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.61 50.0 4.68e-01 88.5% 100.0%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.60 36.0 3.87e-01 80.8% 71.4%
5aj3E01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.60 49.0 4.87e-01 93.6% 86.4%
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 51.0 4.91e-01 93.6% 96.7%
1fguB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 50.0 4.36e-01 94.9% 91.1%
4damC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 49.0 4.55e-01 93.6% 95.0%
1jkfA03 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.58 35.0 3.83e-01 79.5% 76.7%
3h3iA00 2.40.128.220 Mainly Beta › Beta Barrel › Lipocalin › 0.57 44.0 3.67e-01 83.3% 68.1%
4dduA07 2.60.510.20 Mainly Beta › Sandwich › EV matrix protein fold › 0.57 48.0 4.39e-01 94.9% 75.7%
4dolA01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.57 48.0 3.88e-01 94.9% 78.8%
1jb7A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 48.0 3.86e-01 100.0% 96.4%
5b3pA00 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.56 47.0 3.98e-01 94.9% 56.0%
4qloA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 41.0 2.71e-01 76.9% 91.1%
5tseA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.56 47.0 3.97e-01 94.9% 83.8%
1tkkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 41.0 3.66e-01 84.6% 54.8%
1atnD00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.55 45.0 3.19e-01 91.0% 98.4%
2zadA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 40.0 3.64e-01 84.6% 55.3%
1rm6A03 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.55 42.0 3.62e-01 85.9% 66.7%
1h2iA01 3.30.390.80 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 0.54 41.0 3.43e-01 83.3% 55.4%
2hhiA01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.54 40.0 3.57e-01 80.8% 77.1%
2rgqB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 41.0 3.56e-01 84.6% 81.2%
2w3sB02 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.54 42.0 3.38e-01 85.9% 57.8%
5xd7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 39.0 3.35e-01 84.6% 47.2%
3bf2A00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.53 44.0 3.85e-01 94.9% 83.2%
3caxA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 37.0 3.09e-01 73.1% 73.2%
4gxbA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 42.0 3.94e-01 97.4% 70.2%
5kkuD00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.52 39.0 2.73e-01 82.1% 36.6%
3er7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 40.0 3.55e-01 85.9% 87.0%
3cyjA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 38.0 3.33e-01 85.9% 49.2%
1eyqA02 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.52 43.0 3.51e-01 94.9% 79.2%
1c8zA00 3.20.90.10 Alpha Beta › Alpha-Beta Barrel › Tubby Protein; Chain A › Tubby Protein; Chain A 0.52 45.0 3.19e-01 100.0% 87.9%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 40.0 3.50e-01 85.9% 76.4%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 38.0 3.47e-01 100.0% 57.9%
2r76A00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.51 43.0 3.73e-01 97.4% 86.4%
4n4rB00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.51 42.0 3.50e-01 94.9% 75.5%
6rupA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 42.0 3.80e-01 94.9% 94.6%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3415831 4.25.1.2 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD 0.70 66.0 5.56e-01 98.7% 78.3%
3710314 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 56.0 4.59e-01 93.6% 72.4%
3425066 708.1.1.1 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM 0.65 48.0 3.76e-01 80.8% 72.8%
3598329 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 55.0 4.67e-01 93.6% 91.2%
3184389 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 56.0 4.31e-01 100.0% 48.0%
4309330 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.61 53.0 4.61e-01 93.6% 99.1%
3727783 212.1.1.0 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.61 47.0 3.52e-01 84.6% 45.9%
3997034 224.1.1.0 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.61 52.0 4.43e-01 96.2% 91.5%
4979630 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 52.0 4.57e-01 94.9% 99.1%
3927132 221.13.1.0 ↗ a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain 0.60 46.0 4.10e-01 83.3% 97.4%
4012966 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 50.0 4.27e-01 92.3% 65.6%
5000768 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.59 52.0 4.56e-01 96.2% 96.5%
4948015 2.1.1.358 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM 0.59 50.0 4.46e-01 92.3% 95.5%
3781523 243.1.1.42 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MMU163 0.59 47.0 3.82e-01 85.9% 83.2%
3292384 708.1.1.1 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM 0.58 43.0 3.56e-01 82.1% 69.7%
3708657 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 46.0 3.87e-01 85.9% 88.9%
3333639 11.1.1.51 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 0.58 45.0 3.72e-01 85.9% 94.5%
3408176 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.57 43.0 3.81e-01 83.3% 84.2%
3275455 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.57 48.0 4.16e-01 93.6% 96.7%
3238052 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.56 45.0 2.91e-01 88.5% 23.2%
3285903 814.1.1.0 ↗ a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase 0.56 46.0 3.70e-01 91.0% 54.2%
4586503 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.56 44.0 3.73e-01 87.2% 84.4%
3843944 243.5.1.7 ↗ a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › AKAP28 0.56 45.0 3.88e-01 88.5% 71.2%
1868022 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.56 47.0 3.98e-01 94.9% 56.0%
1918550 7503.1.1.4 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LptE 0.56 47.0 3.97e-01 94.9% 83.8%
3678038 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.56 45.0 4.59e-01 85.9% 92.0%
3496732 5.1.4.139 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 0.56 48.0 2.94e-01 96.2% 88.1%
3460209 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 44.0 2.86e-01 84.6% 24.2%
3422361 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 44.0 4.47e-01 84.6% 90.7%
3749143 243.3.1.20 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › AKAP28 0.55 45.0 3.84e-01 88.5% 71.2%
3782874 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.55 43.0 3.30e-01 85.9% 56.2%
3537881 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.55 44.0 3.56e-01 91.0% 70.3%
5061278 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 44.0 3.85e-01 85.9% 85.2%
3504767 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.55 44.0 4.66e-01 92.3% 97.1%
3813787 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 48.0 4.28e-01 100.0% 96.5%
3344144 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.54 42.0 4.13e-01 83.3% 82.1%
4593266 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.54 43.0 4.40e-01 88.5% 90.7%
3924927 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.53 42.0 2.93e-01 88.5% 44.9%
3713587 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 47.0 4.32e-01 97.4% 99.0%
3258070 295.1.1.4 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.53 41.0 4.08e-01 85.9% 92.9%
3395095 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.53 38.0 4.05e-01 84.6% 92.3%
3669519 2.1.1.105 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NMD3_OB 0.52 42.0 3.99e-01 88.5% 97.9%
4018556 330.1.1.4 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 0.52 42.0 3.35e-01 88.5% 52.5%
196538 7503.1.1.4 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LptE 0.51 43.0 3.73e-01 97.4% 86.4%
3716770 2.1.1.135 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 0.51 42.0 3.82e-01 89.7% 75.2%
3961157 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.51 37.0 3.30e-01 79.5% 78.3%
3724349 1.1.1.18 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.50 35.0 3.03e-01 89.7% 42.1%
3384215 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.50 37.0 3.91e-01 80.8% 95.7%
D2 high residues 94-105_180-240
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3rq9A00 1.10.287.2500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.79 59.0 5.75e-01 87.7% 73.1%
2gv9A05 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.78 56.0 6.14e-01 78.1% 93.2%
3txsC01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.77 58.0 5.79e-01 80.8% 96.0%
3dytA02 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.77 59.0 4.38e-01 83.6% 37.9%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 60.0 6.03e-01 83.6% 87.7%
4q20A01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.76 59.0 5.70e-01 83.6% 76.8%
6gy8A01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.76 58.0 3.76e-01 83.6% 18.7%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.73 57.0 5.65e-01 83.6% 85.7%
3rx6A00 1.20.58.1090 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phage polarity suppression protein monomer 0.72 55.0 4.08e-01 82.2% 86.1%
2qvaA02 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.72 48.0 5.39e-01 74.0% 96.2%
1vcsA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.72 63.0 5.64e-01 97.3% 76.5%
1m5iA00 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.72 55.0 4.90e-01 83.6% 65.7%
3uumA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 64.0 5.40e-01 100.0% 74.6%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 61.0 5.51e-01 97.3% 86.1%
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.69 53.0 5.52e-01 83.6% 98.5%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.69 53.0 4.66e-01 83.6% 56.4%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.69 53.0 5.36e-01 95.9% 82.4%
1qsdA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 52.0 4.69e-01 83.6% 58.8%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.68 53.0 4.32e-01 83.6% 48.9%
2l3lA01 1.20.58.1250 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain 0.67 50.0 4.48e-01 80.8% 55.7%
4h63H01 1.20.58.1710 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 51.0 5.15e-01 83.6% 94.4%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.67 51.0 4.88e-01 83.6% 75.0%
2ra1A03 1.20.58.770 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 44.0 4.66e-01 89.0% 77.8%
4errB00 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 50.0 4.79e-01 82.2% 75.9%
2rkhA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.65 57.0 5.64e-01 97.3% 97.4%
1vf7A03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.64 47.0 5.04e-01 76.7% 100.0%
4p3fA00 1.10.3450.40 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain 0.62 55.0 4.09e-01 100.0% 40.4%
3l1nA02 1.20.1280.140 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.62 52.0 5.00e-01 95.9% 85.1%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.57 50.0 4.47e-01 97.3% 90.3%
8sorA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.55 47.0 3.06e-01 97.3% 29.4%
4hehA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.55 43.0 4.20e-01 100.0% 78.3%
2x6hA03 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.54 46.0 3.47e-01 100.0% 68.5%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3949864 632.1.1.37 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › DUF6474 0.86 63.0 5.82e-01 76.7% 62.2%
3715996 4970.1.1.0 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.85 57.0 6.80e-01 71.2% 100.0%
3989466 1075.1.2.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.82 65.0 3.72e-01 83.6% 9.8%
3708191 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.81 60.0 5.94e-01 91.8% 74.7%
3927006 603.1.1.99 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 0.77 69.0 6.43e-01 97.3% 87.8%
3962893 150.5.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.76 59.0 5.42e-01 83.6% 66.3%
4984327 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.76 59.0 5.21e-01 83.6% 82.9%
3838686 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.76 58.0 6.28e-01 86.3% 98.3%
3596375 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.75 67.0 5.55e-01 97.3% 81.6%
3995816 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.75 53.0 5.07e-01 84.9% 63.5%
3286299 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.75 58.0 5.04e-01 83.6% 55.5%
3788338 604.12.1.9 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT2 0.74 57.0 5.69e-01 91.8% 78.4%
4405928 5086.1.1.196 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_YknX 0.74 58.0 5.93e-01 83.6% 90.0%
3935032 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.74 66.0 5.85e-01 98.6% 84.8%
3170876 192.7.1.30 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › CUX1_N 0.74 56.0 4.90e-01 83.6% 54.8%
3636681 4177.1.1.1 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.74 57.0 3.73e-01 83.6% 21.3%
3794795 603.1.1.3 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.74 65.0 5.86e-01 97.3% 83.0%
4039014 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.73 57.0 4.96e-01 83.6% 55.5%
3941250 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.73 65.0 5.66e-01 98.6% 80.9%
3940791 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.73 64.0 5.78e-01 97.3% 88.0%
3916825 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.73 55.0 4.28e-01 79.5% 98.7%
4671 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.72 56.0 4.90e-01 83.6% 79.1%
3731974 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.71 55.0 4.81e-01 83.6% 81.8%
5048041 610.2.1.0 ↗ alpha arrays › ERP29 C domain-like › Helical domain of Sec23/24 › Helical domain of Sec23/24 0.71 60.0 5.44e-01 100.0% 69.5%
3504339 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.71 62.0 5.45e-01 98.6% 81.8%
3470544 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.71 61.0 5.58e-01 94.5% 88.4%
3808 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.70 61.0 5.42e-01 97.3% 82.1%
3984078 5085.1.1.1 ↗ a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP 0.70 54.0 3.60e-01 83.6% 23.1%
3992590 603.1.1.110 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF26585 0.70 60.0 5.45e-01 97.3% 83.0%
3960219 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.69 52.0 5.25e-01 83.6% 85.3%
5024797 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.68 45.0 4.71e-01 78.1% 75.4%
3964486 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.68 52.0 4.10e-01 83.6% 41.2%
5047074 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.68 52.0 3.32e-01 83.6% 18.4%
4991399 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.68 59.0 5.62e-01 97.3% 84.7%
3944501 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.67 52.0 5.09e-01 83.6% 82.5%
3947741 5086.1.1.84 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND 0.67 51.0 4.39e-01 83.6% 55.0%
3771990 3567.1.1.6 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › DGCR6 0.65 51.0 4.27e-01 83.6% 51.2%
4942772 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.65 53.0 5.61e-01 89.0% 100.0%
3864552 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.65 55.0 5.05e-01 98.6% 88.0%
4017831 4970.1.1.0 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.58 48.0 3.87e-01 94.5% 69.7%
D3 high residues 110-177
PDB
Domain cluster: rep: MW419086.1__QQO41050.1__015DV002_96__00096__D2-67