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NC_031100.1__YP_009290134.1__BI003_gp255__00255
Bact-VirNC_031100.1__YP_009290134.1__BI003_gp255__00255
Identity
- Accession:
- NC_031100 ↗
- Kingdom:
- phage
Quality
91.0
mean pLDDT
Taxonomy
TaxID: 1805953
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-97
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26894.1 best | Phage_T4_Y07C | 50.2 | 4.40e-13 | 84.4% | 98.4% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k2tA01 | 3.30.505.50 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | 0.69 | 35.0 | 4.57e-01 | 99.0% | 97.8% |
| 3lm3A02 | 3.30.1120.110 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.66 | 33.0 | 3.23e-01 | 100.0% | 43.0% |
| 2acaA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.62 | 33.0 | 2.73e-01 | 100.0% | 28.7% |
| 2jheA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 34.0 | 3.33e-01 | 76.0% | 49.1% |
| 1krlA00 | 6.20.50.130 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.59 | 25.0 | 3.52e-01 | 93.8% | 84.1% |
| 2nmlA00 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.55 | 46.0 | 4.59e-01 | 94.8% | 87.0% |
| 4g2sA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.54 | 43.0 | 4.22e-01 | 99.0% | 81.1% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.54 | 29.0 | 3.78e-01 | 100.0% | 98.0% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 27.0 | 3.04e-01 | 94.8% | 61.3% |
| 3a32A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.52 | 44.0 | 3.90e-01 | 100.0% | 63.1% |
| 3ednA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.52 | 36.0 | 3.27e-01 | 84.4% | 51.5% |
| 2fgeA01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.52 | 42.0 | 3.14e-01 | 88.5% | 80.5% |
| 6x4tA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 34.0 | 3.55e-01 | 85.4% | 75.3% |
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.50 | 27.0 | 2.67e-01 | 96.9% | 46.2% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4029229 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.69 | 27.0 | 3.61e-01 | 94.8% | 64.0% |
| 3686792 | 263.1.1.0 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like | 0.64 | 39.0 | 4.66e-01 | 78.1% | 96.7% |
| 4664970 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 23.0 | 3.28e-01 | 86.5% | 73.3% |
| 4680459 | 375.1.1.67 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › NrdR-like_N | 0.59 | 23.0 | 3.23e-01 | 86.5% | 73.3% |
| 3663326 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.58 | 35.0 | 3.43e-01 | 97.9% | 54.3% |
| 3703176 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.57 | 24.0 | 3.35e-01 | 90.6% | 77.3% |
| 4974065 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.56 | 27.0 | 3.44e-01 | 92.7% | 76.7% |
| 4436049 | 1190.1.1.1 ↗ | a+b two layers › Curli production assembly/transport component CsgF › Curli production assembly/transport component CsgF › Curli production assembly/transport component CsgF › CsgF | 0.54 | 31.0 | 3.16e-01 | 93.8% | 53.0% |
| 4120507 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.54 | 35.0 | 3.53e-01 | 100.0% | 65.3% |
| 591 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.54 | 27.0 | 3.03e-01 | 94.8% | 60.5% |
| 3720660 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 27.0 | 2.97e-01 | 94.8% | 61.3% |
| 3228051 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.50 | 29.0 | 3.30e-01 | 100.0% | 80.0% |
| 4363805 | 292.2.1.9 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_4 | 0.50 | 31.0 | 3.21e-01 | 94.8% | 64.4% |