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NC_031107.2__YP_009290816.1__ASESINO_198__00186

Bact-Vir

NC_031107.2__YP_009290816.1__ASESINO_198__00186

Identity

Accession:
NC_031107 ↗
Kingdom:
phage

Quality

95.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Erskinevirus› Erwinia_phage_vB_EamM_Asesino

TaxID: 1883370

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-59_143-174
PDB
Domain cluster: rep: KX397365.1__ANZ48482.1__CAITLIN_187__00180__D2-52_143-175
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x5yA00 3.90.228.10 Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › 0.72 66.0 5.31e-01 100.0% 64.3%
1wfxA02 3.20.170.30 Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › 0.68 60.0 6.04e-01 97.8% 95.6%
2hw2A00 3.20.170.40 Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Rifampin ADP-ribosyltransferase domain 0.66 59.0 5.12e-01 98.9% 71.0%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3059252 237.1.1.11 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › RES 0.75 67.0 5.58e-01 98.9% 94.9%
3798868 237.1.1.1 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP 0.74 68.0 4.95e-01 100.0% 62.1%
4876939 237.1.1.1 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP 0.72 66.0 5.16e-01 100.0% 62.6%
5008044 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.68 62.0 6.07e-01 100.0% 93.7%
3638034 237.1.1.36 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › DUF7587 0.68 61.0 5.21e-01 100.0% 95.9%
5061730 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.67 59.0 5.96e-01 98.9% 95.6%
3106804 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.67 60.0 5.74e-01 100.0% 85.4%
4546240 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.67 60.0 6.02e-01 100.0% 97.8%
4679144 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.67 59.0 5.80e-01 100.0% 91.6%
4125268 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.66 59.0 5.90e-01 100.0% 96.7%
4994805 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.65 58.0 5.60e-01 100.0% 87.4%
5060086 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.64 57.0 5.60e-01 100.0% 93.7%
D2 high residues 63-124
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yy5A02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.57 46.0 3.95e-01 100.0% 70.6%
2hsbA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.56 45.0 3.74e-01 96.8% 84.9%
2qytA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.51 41.0 3.62e-01 96.8% 80.2%
1surA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 43.0 2.99e-01 96.8% 73.5%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3601534 309.1.1.0 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase 0.55 41.0 2.98e-01 83.9% 53.7%
3706762 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 41.0 3.08e-01 82.3% 32.7%
3570870 6140.1.1.3 ↗ alpha superhelices › Cdc45-Binding Domain in Sld3/Treslin › Cdc45-Binding Domain in Sld3/Treslin › Cdc45-Binding Domain in Sld3/Treslin › Treslin_STD 0.53 40.0 2.94e-01 82.3% 54.3%
3781815 109.4.1.1561 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_LAA1_C 0.53 40.0 3.04e-01 85.5% 32.5%
5023734 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.52 43.0 3.00e-01 100.0% 71.4%
3802176 604.16.1.3 ↗ alpha bundles › Spectrin repeat-like › Hypothetical membrane protein Ta0354, soluble domain › Hypothetical membrane protein Ta0354, soluble domain › Vwaint 0.52 41.0 3.60e-01 93.5% 77.1%
3786752 1072.1.1.1 ↗ alpha bundles › Hsp90 co-chaperone Cdc37 N-terminal domain › Hsp90 co-chaperone Cdc37 N-terminal domain › Hsp90 co-chaperone Cdc37 N-terminal domain › CDC37_N 0.51 41.0 2.97e-01 93.5% 55.0%
3512916 109.4.1.63 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TAP42 0.51 38.0 2.85e-01 87.1% 68.9%
5032839 129.1.1.2 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 3HCDH 0.50 35.0 3.19e-01 75.8% 83.3%