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NC_031108.1__YP_009290917.1__BI041_gp10__00010

Bact-Vir

NC_031108.1__YP_009290917.1__BI041_gp10__00010

Identity

Accession:
NC_031108 ↗
Kingdom:
phage

Quality

85.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pulverervirus› Propionibacterium_phage_PFR2

TaxID: 1838138

Cluster

View cluster (32 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-192
PDB
Domain cluster: rep: MT701595.1__QPB09697.1__CPT_Shaeky_010__00010__D39-56_73-184
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25681.2 best Phage_TTP_17 59.6 5.00e-16 96.2% 69.8%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.67 51.0 5.46e-01 94.9% 89.8%
3eaaA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.64 54.0 5.34e-01 98.7% 85.8%
2kx2A00 3.30.780.30 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › 0.62 30.0 3.76e-01 95.5% 74.0%
1h54A03 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.54 22.0 3.13e-01 98.1% 78.4%
4lfhD02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 28.0 3.69e-01 92.9% 92.9%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5004308 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.83 71.0 7.19e-01 100.0% 90.3%
3943316 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.82 72.0 7.22e-01 97.4% 90.6%
3964955 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.81 70.0 6.93e-01 97.4% 88.1%
4514734 1.1.13.42 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Tail_tube 0.78 51.0 5.99e-01 94.2% 93.6%
3590380 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 69.0 6.52e-01 99.4% 82.8%
4157825 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 58.0 6.28e-01 96.8% 93.8%
2674670 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.76 57.0 5.54e-01 98.1% 70.9%
4929634 1.1.5.47 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.75 52.0 4.30e-01 94.9% 40.7%
4954552 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.74 64.0 6.36e-01 96.2% 88.7%
3502370 1.1.5.47 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.73 59.0 5.91e-01 98.7% 83.1%
4957560 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.73 55.0 5.99e-01 96.2% 93.8%
3976188 1.1.13.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube 0.73 57.0 5.64e-01 98.1% 77.6%
3970827 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.71 38.0 4.99e-01 82.1% 95.3%
3965192 1.1.13.67 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2460 0.70 50.0 5.81e-01 83.3% 100.0%
2832217 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.69 55.0 5.71e-01 96.2% 90.8%
3581358 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.69 57.0 5.77e-01 94.9% 87.1%
4034209 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.68 54.0 5.87e-01 85.3% 96.3%
4030848 1.1.13.52 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_1 0.68 61.0 6.03e-01 99.4% 90.2%
3164699 1.1.13.33 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N 0.68 47.0 5.37e-01 84.0% 95.7%
1444177 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.67 51.0 5.41e-01 94.2% 89.0%
184986 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.67 49.0 5.40e-01 93.6% 94.4%
2101663 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.67 56.0 5.52e-01 94.9% 84.7%
4033579 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.66 50.0 5.57e-01 94.2% 98.4%
4954561 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.66 52.0 5.60e-01 94.2% 96.3%
4888732 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.65 50.0 5.02e-01 95.5% 79.5%
2101633 1.1.13.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube 0.64 55.0 5.39e-01 91.7% 85.6%
5004559 1.1.13.75 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube 0.64 51.0 5.45e-01 84.0% 98.5%
1117606 1.1.13.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_N 0.63 47.0 5.00e-01 94.2% 90.3%
3709897 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 26.0 3.24e-01 90.4% 63.2%
3111928 3114.1.1.3 ↗ beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain › Muc_B2 0.57 26.0 3.10e-01 82.7% 61.4%
4979196 241.1.1.6 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN 0.51 30.0 3.27e-01 91.7% 68.0%