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NC_031109.1__YP_009291004.1__BIZ69_gp039__00039
Bact-VirNC_031109.1__YP_009291004.1__BIZ69_gp039__00039
Identity
- Accession:
- NC_031109 ↗
- Kingdom:
- phage
Quality
74.8
mean pLDDT
Taxonomy
TaxID: 1887650
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 23-75
Domain cluster:
representative
D2
medium
residues 76-125
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oyhA00 | 1.20.5.50 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.81 | 61.0 | 5.63e-01 | 82.0% | 100.0% |
| 3ufbA01 | 1.20.1260.30 | Mainly Alpha › Up-down Bundle › Ferritin › N6 adenine-specific DNA methyltransferase, N-terminal domain | 0.77 | 68.0 | 4.75e-01 | 100.0% | 71.1% |
| 1br2A04 | 1.20.58.530 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 58.0 | 4.04e-01 | 96.0% | 70.1% |
| 2y2wC02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 52.0 | 3.11e-01 | 88.0% | 33.1% |
| 4nphA02 | 1.20.1270.330 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.62 | 52.0 | 4.60e-01 | 96.0% | 89.2% |
| 4xcvA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 41.0 | 2.86e-01 | 78.0% | 38.0% |
| 6xasW01 | 3.90.940.10 | Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › RNA polymerase subunit, RPB6/omega | 0.53 | 39.0 | 3.94e-01 | 80.0% | 87.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3696222 | 109.4.1.1379 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30880 | 0.79 | 68.0 | 3.89e-01 | 94.0% | 28.4% |
| 5052286 | 2494.1.1.2 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › tRNA-Thr_ED | 0.73 | 63.0 | 4.25e-01 | 100.0% | 26.5% |
| 3527000 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.68 | 59.0 | 4.75e-01 | 100.0% | 55.0% |
| 4985278 | 2004.1.1.85 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase | 0.64 | 50.0 | 3.06e-01 | 82.0% | 13.7% |
| 3742209 | 6140.1.1.0 ↗ | alpha superhelices › Cdc45-Binding Domain in Sld3/Treslin › Cdc45-Binding Domain in Sld3/Treslin › Cdc45-Binding Domain in Sld3/Treslin | 0.61 | 54.0 | 3.51e-01 | 100.0% | 27.2% |