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NC_031120.1__YP_009292264.1__BIZ78_gp089__00184

Bact-Vir

NC_031120.1__YP_009292264.1__BIZ78_gp089__00184

Identity

Accession:
NC_031120 ↗
Kingdom:
phage

Quality

84.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Machinavirus› Erwinia_phage_vB_EamM_Caitlin

TaxID: 1883379

Cluster

View cluster (10 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 29-124
PDB
Domain cluster: rep: KX397365.1__ANZ48394.1__CAITLIN_99__00092__D45-129
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xfdA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.69 61.0 3.91e-01 99.0% 24.6%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.68 62.0 4.27e-01 100.0% 35.2%
2z3zA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.66 60.0 3.94e-01 100.0% 37.6%
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.66 60.0 4.08e-01 99.0% 29.9%
4mlgG00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 59.0 4.06e-01 100.0% 34.6%
1yr2A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.64 58.0 3.99e-01 100.0% 32.0%
8djfA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.64 57.0 4.14e-01 100.0% 37.8%
5k19A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 58.0 3.84e-01 100.0% 26.6%
3w15A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 54.0 3.72e-01 99.0% 26.9%
6eotD01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.63 55.0 3.51e-01 99.0% 27.9%
2xe4A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.63 55.0 3.76e-01 99.0% 26.7%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.62 55.0 3.79e-01 99.0% 29.4%
1jofA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 55.0 3.71e-01 100.0% 28.5%
5c2vB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 55.0 3.72e-01 100.0% 34.7%
4yy8A02 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.60 53.0 3.79e-01 100.0% 38.3%
7b9cA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 53.0 3.59e-01 100.0% 29.0%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 53.0 3.61e-01 100.0% 29.2%
1qmoE01 2.60.40.4220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 44.0 4.63e-01 97.9% 91.7%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 38.0 4.35e-01 97.9% 97.0%
3ottA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 52.0 3.67e-01 100.0% 32.4%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 40.0 3.60e-01 74.0% 53.2%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 36.0 4.10e-01 83.3% 92.4%
4c57B00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.54 48.0 3.42e-01 100.0% 53.9%
8bddA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 44.0 3.06e-01 93.8% 80.0%
4bjjB00 2.60.40.4370 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 39.0 4.14e-01 94.8% 88.2%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.53 39.0 3.13e-01 100.0% 38.9%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 34.0 2.84e-01 100.0% 36.9%
3fssA01 2.30.29.120 Mainly Beta › Roll › PH-domain like › 0.50 40.0 3.54e-01 84.4% 67.6%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3431347 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.73 59.0 4.31e-01 99.0% 32.9%
3441510 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.72 57.0 4.11e-01 84.4% 38.1%
4407231 5.1.5.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.71 64.0 4.11e-01 100.0% 25.9%
4561478 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.71 65.0 3.74e-01 99.0% 14.2%
4022926 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 65.0 4.20e-01 100.0% 29.1%
3819893 5.1.4.288 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › APEH_N 0.70 63.0 4.06e-01 100.0% 31.1%
4812524 5.1.2.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DPPIV_N 0.69 62.0 3.93e-01 99.0% 24.6%
3176357 5.1.5.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.68 62.0 3.92e-01 99.0% 24.9%
4297022 5.1.3.26 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.68 61.0 3.86e-01 99.0% 49.3%
3468940 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.68 60.0 4.11e-01 99.0% 33.0%
3465992 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.67 60.0 4.12e-01 99.0% 39.1%
3709430 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 58.0 3.87e-01 93.8% 85.8%
3659799 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 58.0 3.43e-01 100.0% 12.3%
3830390 5.1.3.65 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.66 59.0 4.10e-01 99.0% 36.5%
3666904 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.66 59.0 4.07e-01 99.0% 38.2%
3735486 5.1.4.221 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › SGL 0.66 58.0 3.87e-01 99.0% 33.8%
3611339 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.65 36.0 3.79e-01 84.4% 60.0%
4939670 5.1.3.20 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PD40 0.65 56.0 3.94e-01 99.0% 30.0%
3350373 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.65 59.0 4.11e-01 99.0% 41.7%
4613622 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.65 59.0 4.03e-01 100.0% 32.7%
3940393 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 59.0 3.48e-01 99.0% 15.9%
3907223 5.1.3.179 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Sortilin-Vps10 0.65 59.0 4.36e-01 100.0% 50.6%
3176175 5.1.4.250 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF2415 0.65 59.0 3.89e-01 100.0% 25.3%
3831707 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.65 58.0 3.94e-01 100.0% 95.5%
3822639 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.65 58.0 3.98e-01 100.0% 93.8%
3289896 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 56.0 3.36e-01 99.0% 13.1%
3333962 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.64 56.0 3.75e-01 99.0% 25.3%
3625916 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 56.0 3.76e-01 97.9% 36.6%
3643520 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.64 58.0 4.02e-01 100.0% 36.5%
3915194 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.64 57.0 3.87e-01 100.0% 27.5%
3253996 5.1.5.73 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PEP5_VPS11_N 0.64 58.0 3.91e-01 100.0% 31.0%
3347232 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 57.0 3.86e-01 100.0% 27.8%
3819875 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.64 58.0 3.95e-01 100.0% 92.4%
3821607 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.63 56.0 3.88e-01 100.0% 42.3%
3298666 109.54.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 0.63 57.0 3.56e-01 100.0% 19.0%
3185947 5.1.4.271 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.63 57.0 3.59e-01 100.0% 22.9%
3601264 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.63 56.0 3.75e-01 100.0% 38.7%
3254426 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.63 51.0 4.57e-01 100.0% 62.2%
5081985 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 57.0 3.97e-01 100.0% 31.1%
3432908 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.63 57.0 3.87e-01 100.0% 95.6%
3737620 5.1.5.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.63 56.0 3.55e-01 100.0% 19.8%
3601821 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 56.0 3.30e-01 99.0% 12.9%
3420257 5.1.2.55 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › FBA_3 0.63 56.0 4.06e-01 99.0% 41.5%
140909 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.63 55.0 3.58e-01 99.0% 21.2%
3325704 5.1.4.222 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_prop_At2g24240 0.63 56.0 3.79e-01 100.0% 34.1%
3721487 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 56.0 3.74e-01 99.0% 30.1%
4140248 5.1.4.577 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › YqgU 0.61 55.0 3.84e-01 99.0% 30.6%
3827447 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.61 42.0 3.37e-01 71.9% 86.7%
4159908 5.1.4.42 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_4 0.61 54.0 3.77e-01 100.0% 36.7%
3781119 5.1.4.97 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop 0.61 55.0 3.54e-01 100.0% 24.1%
4991507 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 53.0 3.71e-01 99.0% 29.8%
426019 5.1.4.26 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Reg_prop 0.60 52.0 3.70e-01 99.0% 30.8%
3612517 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.59 53.0 3.12e-01 100.0% 12.8%
5046573 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.59 36.0 3.09e-01 86.5% 36.9%
3600523 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.59 46.0 3.10e-01 85.4% 60.4%
4975453 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.58 40.0 3.38e-01 71.9% 89.3%
4071195 206.1.1.11 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.58 52.0 3.45e-01 100.0% 60.8%
3368126 5.1.5.37 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF295 0.58 51.0 3.78e-01 99.0% 50.6%
3317211 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.57 41.0 3.35e-01 75.0% 87.8%
5077455 5.1.11.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.56 51.0 3.45e-01 100.0% 29.7%
3937046 9.2.1.5 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7043 0.55 45.0 4.39e-01 100.0% 81.0%
4944706 206.1.1.10 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase 0.55 48.0 3.52e-01 99.0% 79.3%
3263745 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.53 41.0 3.49e-01 84.4% 100.0%
3056895 71.1.1.7 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_2 0.52 46.0 3.68e-01 99.0% 83.2%
4958069 206.1.1.11 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.51 45.0 3.13e-01 99.0% 68.5%
388243 206.1.1.10 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase 0.50 43.0 3.01e-01 100.0% 64.5%