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NC_031126.1__YP_009292886.1__BIZ83_gp094__00186
Bact-VirNC_031126.1__YP_009292886.1__BIZ83_gp094__00186
Identity
- Accession:
- NC_031126 ↗
- Kingdom:
- phage
Quality
83.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Machinavirus›
Erwinia_phage_vB_EamM_ChrisDB
TaxID: 1883371
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-145
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1c8uA02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.61 | 42.0 | 4.59e-01 | 100.0% | 86.1% |
| 2q2bA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.60 | 40.0 | 4.11e-01 | 99.3% | 68.8% |
| 3qooA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 42.0 | 4.38e-01 | 99.3% | 80.6% |
| 2oiwA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 41.0 | 4.25e-01 | 99.3% | 78.9% |
| 4fvkA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.57 | 44.0 | 3.24e-01 | 79.7% | 94.8% |
| 5byuA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 40.0 | 4.25e-01 | 99.3% | 81.2% |
| 3bf2A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.56 | 32.0 | 3.45e-01 | 100.0% | 64.0% |
| 4k00A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 41.0 | 4.21e-01 | 99.3% | 78.8% |
| 2gvhC01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 40.0 | 4.10e-01 | 99.3% | 77.2% |
| 1z54A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 41.0 | 4.23e-01 | 99.3% | 81.8% |
| 2egjA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 41.0 | 4.33e-01 | 99.3% | 85.7% |
| 2gf6A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 40.0 | 4.18e-01 | 99.3% | 81.2% |
| 3ck1A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 41.0 | 4.13e-01 | 99.3% | 76.9% |
| 1ixlA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 41.0 | 4.34e-01 | 100.0% | 86.8% |
| 2o5uA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 40.0 | 4.00e-01 | 99.3% | 74.3% |
| 1njkA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 40.0 | 4.13e-01 | 99.3% | 81.2% |
| 2q78F00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 40.0 | 4.15e-01 | 99.3% | 80.9% |
| 3ir3A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 40.0 | 4.30e-01 | 99.3% | 88.1% |
| 2imjD01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 33.0 | 3.35e-01 | 74.1% | 59.2% |
| 2fs2B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 41.0 | 4.19e-01 | 100.0% | 83.3% |
| 3nwzB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 40.0 | 3.98e-01 | 100.0% | 74.2% |
| 3lw3B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 40.0 | 4.10e-01 | 100.0% | 81.8% |
| 6i7sG01 | 2.30.230.10 | Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A | 0.53 | 39.0 | 3.24e-01 | 76.9% | 86.7% |
| 2hx5A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 41.0 | 4.12e-01 | 99.3% | 80.4% |
| 3bnvD00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 41.0 | 4.19e-01 | 100.0% | 81.8% |
| 3hm0A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 39.0 | 4.20e-01 | 98.6% | 88.9% |
| 3e29B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 40.0 | 4.14e-01 | 100.0% | 88.1% |
| 1zkiA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 40.0 | 4.21e-01 | 98.6% | 95.2% |
| 5dl8A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.50 | 38.0 | 2.75e-01 | 79.0% | 96.9% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5027896 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.63 | 34.0 | 3.66e-01 | 76.9% | 60.0% |
| 5047928 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.62 | 41.0 | 4.43e-01 | 81.8% | 80.0% |
| 5057839 | 283.1.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 | 0.61 | 41.0 | 3.37e-01 | 94.4% | 39.2% |
| 4937367 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.60 | 33.0 | 3.54e-01 | 77.6% | 60.8% |
| 4033686 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.58 | 42.0 | 4.46e-01 | 100.0% | 85.6% |
| 152631 | 5.1.3.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur | 0.57 | 44.0 | 3.24e-01 | 79.7% | 94.8% |
| 4991712 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.57 | 40.0 | 3.92e-01 | 99.3% | 64.4% |
| 5072674 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.56 | 33.0 | 3.43e-01 | 79.7% | 62.3% |
| 4958682 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.56 | 32.0 | 3.40e-01 | 78.3% | 61.5% |
| 4991711 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.56 | 41.0 | 4.04e-01 | 99.3% | 72.0% |
| 4424375 | 222.1.1.28 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PF27762 | 0.55 | 41.0 | 4.47e-01 | 98.6% | 93.3% |
| 4031907 | 222.1.1.28 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PF27762 | 0.54 | 40.0 | 4.40e-01 | 99.3% | 99.1% |
| 5057736 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 38.0 | 3.94e-01 | 77.6% | 77.8% |
| 4990194 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 33.0 | 3.79e-01 | 93.7% | 83.8% |
| 3644309 | 71.1.1.12 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF620 | 0.53 | 45.0 | 3.48e-01 | 90.9% | 91.5% |
| 3587294 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.53 | 41.0 | 4.50e-01 | 100.0% | 98.3% |
| 3623219 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.53 | 44.0 | 4.18e-01 | 99.3% | 75.3% |
| 3284706 | 298.1.1.17 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DAP_DH_C | 0.53 | 47.0 | 4.46e-01 | 99.3% | 81.8% |
| 5050255 | 866.1.1.2 ↗ | a+b duplicates or obligate multimers › CheC-like › CheC-like › CheC-like › CheC | 0.53 | 42.0 | 3.72e-01 | 84.6% | 92.9% |
| 3925441 | 5087.2.1.0 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N | 0.52 | 39.0 | 3.21e-01 | 78.3% | 78.1% |
| 3629163 | 5087.2.1.0 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N | 0.52 | 39.0 | 3.20e-01 | 78.3% | 80.4% |
| 5060118 | 222.1.1.8 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_2 | 0.51 | 40.0 | 4.03e-01 | 100.0% | 79.9% |
| 3942551 | 5084.5.2.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB | 0.51 | 37.0 | 2.65e-01 | 74.8% | 64.4% |
| 3504606 | 5087.2.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 | 0.51 | 39.0 | 3.09e-01 | 79.7% | 88.3% |
| 3960814 | 222.1.1.1 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydratas | 0.51 | 41.0 | 4.16e-01 | 100.0% | 87.9% |
| 3978611 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.50 | 42.0 | 3.32e-01 | 93.0% | 94.7% |
D2
high
residues 152-214
Domain cluster:
rep: MW812338.1__QVW54954.1__pEaSNUABM4_00201__00189__D175-229
CATH (61)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3v8vA01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.83 | 50.0 | 3.34e-01 | 82.5% | 17.9% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.79 | 49.0 | 4.77e-01 | 77.8% | 57.1% |
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.71 | 53.0 | 4.80e-01 | 79.4% | 65.1% |
| 1mw7A03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.69 | 47.0 | 4.45e-01 | 82.5% | 58.7% |
| 2dgtA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.68 | 43.0 | 4.16e-01 | 82.5% | 56.2% |
| 3cjsA00 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.67 | 41.0 | 4.28e-01 | 77.8% | 65.5% |
| 2j0wA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 43.0 | 4.14e-01 | 77.8% | 60.0% |
| 2amyA02 | 3.30.1240.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain | 0.63 | 52.0 | 4.44e-01 | 90.5% | 88.2% |
| 1bqnA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.63 | 43.0 | 3.84e-01 | 82.5% | 48.9% |
| 3mahA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 43.0 | 4.20e-01 | 77.8% | 66.7% |
| 2fyxA00 | 3.30.70.1290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like | 0.62 | 47.0 | 3.74e-01 | 82.5% | 43.1% |
| 1vk8A00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 42.0 | 3.79e-01 | 85.7% | 49.5% |
| 3h0dA01 | 3.30.56.130 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Transcriptional regulator CtsR, winged HTH domain | 0.62 | 53.0 | 5.19e-01 | 100.0% | 93.0% |
| 1mynA00 | 3.30.30.10 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like | 0.62 | 40.0 | 4.41e-01 | 76.2% | 95.5% |
| 2phcB01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.61 | 47.0 | 4.34e-01 | 93.7% | 63.9% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 46.0 | 3.95e-01 | 82.5% | 65.0% |
| 3oreA01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.60 | 43.0 | 4.26e-01 | 82.5% | 72.7% |
| 1b4bA00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.60 | 46.0 | 4.48e-01 | 100.0% | 74.6% |
| 6vudA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.60 | 52.0 | 4.93e-01 | 100.0% | 81.3% |
| 3ssmC02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 51.0 | 3.59e-01 | 100.0% | 37.0% |
| 4fqdA01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.59 | 47.0 | 3.27e-01 | 100.0% | 25.9% |
| 2r7rA04 | 3.30.70.2480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 49.0 | 3.66e-01 | 92.1% | 46.5% |
| 4pwuC00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 42.0 | 3.99e-01 | 81.0% | 62.8% |
| 2zfzD00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.58 | 47.0 | 4.37e-01 | 100.0% | 70.9% |
| 1xxaC00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.58 | 44.0 | 4.24e-01 | 96.8% | 71.2% |
| 3ipjA01 | 3.30.1360.60 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Glucose permease domain IIB | 0.58 | 48.0 | 4.43e-01 | 100.0% | 71.2% |
| 4iscA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 45.0 | 3.48e-01 | 100.0% | 36.5% |
| 1jg5A00 | 3.30.1410.10 | Alpha Beta › 2-Layer Sandwich › Gtp Cyclohydrolase I Feedback Regulatory Protein; Chain: K › GTP cyclohydrolase I feedback regulatory protein GFRP | 0.56 | 43.0 | 4.00e-01 | 85.7% | 97.6% |
| 3jtgA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 46.0 | 4.28e-01 | 100.0% | 94.1% |
| 7txnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 42.0 | 3.89e-01 | 100.0% | 62.2% |
| 3cu7A12 | 2.60.40.690 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain | 0.55 | 48.0 | 3.77e-01 | 100.0% | 45.7% |
| 3tviA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.55 | 46.0 | 3.47e-01 | 95.2% | 81.8% |
| 2f1lA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.54 | 48.0 | 4.23e-01 | 100.0% | 68.5% |
| 3t66A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 45.0 | 3.10e-01 | 100.0% | 38.0% |
| 3fzgA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 46.0 | 3.30e-01 | 100.0% | 33.7% |
| 1lfpA03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.53 | 41.0 | 3.94e-01 | 84.1% | 75.3% |
| 4lowA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.53 | 42.0 | 3.90e-01 | 95.2% | 67.9% |
| 1kgdA02 | 3.30.63.10 | Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › Guanylate Kinase phosphate binding domain | 0.53 | 37.0 | 3.84e-01 | 81.0% | 78.3% |
| 3grzB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 43.0 | 3.12e-01 | 93.7% | 53.9% |
| 1o9gA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 45.0 | 3.24e-01 | 100.0% | 41.7% |
| 3v8hC00 | 3.30.572.10 | Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain | 0.53 | 42.0 | 2.82e-01 | 93.7% | 32.3% |
| 1xviA02 | 3.30.980.20 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 | 0.53 | 43.0 | 3.80e-01 | 90.5% | 94.7% |
| 5dx9A01 | 3.30.70.1020 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 | 0.53 | 45.0 | 4.38e-01 | 100.0% | 91.7% |
| 3aawA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.52 | 42.0 | 3.21e-01 | 93.7% | 79.4% |
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.70e-01 | 100.0% | 61.3% |
| 1earA02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.52 | 39.0 | 3.81e-01 | 81.0% | 97.1% |
| 4ei0A01 | 2.60.40.3550 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 | 0.52 | 44.0 | 3.49e-01 | 100.0% | 56.0% |
| 3jamK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 44.0 | 3.92e-01 | 100.0% | 69.8% |
| 1p6rA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.85e-01 | 100.0% | 72.0% |
| 5xyiK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 44.0 | 3.96e-01 | 100.0% | 73.3% |
| 1kjwA03 | 3.30.63.10 | Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › Guanylate Kinase phosphate binding domain | 0.51 | 37.0 | 3.78e-01 | 79.4% | 80.3% |
| 1u5tA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 4.02e-01 | 100.0% | 86.7% |
| 2bkkA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 42.0 | 3.76e-01 | 93.7% | 67.8% |
| 5jpnC01 | 2.60.40.690 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain | 0.51 | 41.0 | 3.35e-01 | 100.0% | 45.1% |
| 2zzzA02 | 3.30.63.10 | Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › Guanylate Kinase phosphate binding domain | 0.50 | 36.0 | 3.72e-01 | 79.4% | 80.0% |
| 6j0eB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 39.0 | 3.31e-01 | 100.0% | 48.7% |
| 6uvuA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 37.0 | 3.34e-01 | 100.0% | 52.9% |
| 3v10A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 42.0 | 3.33e-01 | 98.4% | 58.2% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.50 | 39.0 | 3.47e-01 | 85.7% | 96.8% |
| 3f6oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 40.0 | 3.69e-01 | 100.0% | 65.9% |
| 1af5A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.50 | 42.0 | 3.47e-01 | 100.0% | 51.6% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4661896 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.84 | 51.0 | 5.05e-01 | 82.5% | 60.0% |
| 4109303 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.83 | 52.0 | 4.86e-01 | 82.5% | 53.3% |
| 4937548 | 304.54.1.0 ↗ | a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like | 0.71 | 43.0 | 4.57e-01 | 77.8% | 69.1% |
| 4964356 | 304.8.1.125 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7523 | 0.69 | 48.0 | 3.99e-01 | 81.0% | 42.2% |
| 4401105 | 304.138.1.0 ↗ | a+b two layers › Alpha-beta plaits | 0.67 | 41.0 | 4.33e-01 | 77.8% | 69.1% |
| 1179696 | 304.138.1.0 ↗ | a+b two layers › Alpha-beta plaits | 0.67 | 41.0 | 4.09e-01 | 77.8% | 56.7% |
| 3590646 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.67 | 57.0 | 4.65e-01 | 100.0% | 71.2% |
| 4027905 | 320.2.1.0 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain | 0.64 | 47.0 | 4.98e-01 | 98.4% | 90.9% |
| 3964348 | 304.28.1.3 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD-TM1 | 0.64 | 46.0 | 4.33e-01 | 76.2% | 65.3% |
| 4314745 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.64 | 40.0 | 3.92e-01 | 84.1% | 57.1% |
| 5082595 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.63 | 45.0 | 4.48e-01 | 79.4% | 73.8% |
| 4467074 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 49.0 | 4.42e-01 | 87.3% | 71.1% |
| 5025962 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 45.0 | 4.22e-01 | 82.5% | 61.3% |
| 4562408 | 101.1.2.76 ↗ | alpha arrays › HTH › HTH › winged helix domain › CtsR | 0.62 | 54.0 | 5.15e-01 | 100.0% | 88.0% |
| 4658950 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.62 | 39.0 | 3.75e-01 | 84.1% | 53.3% |
| 4940609 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.62 | 45.0 | 4.10e-01 | 82.5% | 57.6% |
| 4004813 | 304.28.1.3 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD-TM1 | 0.62 | 45.0 | 4.01e-01 | 84.1% | 52.6% |
| 4946048 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 42.0 | 3.96e-01 | 71.4% | 63.7% |
| 4599928 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.62 | 44.0 | 4.43e-01 | 82.5% | 75.4% |
| 4663291 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.61 | 42.0 | 3.99e-01 | 82.5% | 57.5% |
| 4357399 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.61 | 41.0 | 4.02e-01 | 81.0% | 62.9% |
| 4965997 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.61 | 54.0 | 4.80e-01 | 100.0% | 74.4% |
| 4940257 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.61 | 41.0 | 4.02e-01 | 76.2% | 62.9% |
| 4965407 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.61 | 42.0 | 4.35e-01 | 76.2% | 78.3% |
| 3588365 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 49.0 | 4.48e-01 | 100.0% | 68.2% |
| 4101334 | 304.28.1.3 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD-TM1 | 0.60 | 44.0 | 3.98e-01 | 84.1% | 55.6% |
| 4046004 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.60 | 42.0 | 4.18e-01 | 82.5% | 72.3% |
| 3587571 | 101.1.2.93 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Mga | 0.60 | 48.0 | 4.73e-01 | 100.0% | 82.9% |
| 4044981 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.60 | 42.0 | 4.65e-01 | 77.8% | 94.0% |
| 5066741 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.60 | 43.0 | 3.99e-01 | 82.5% | 58.8% |
| 5053540 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.58 | 50.0 | 3.50e-01 | 100.0% | 46.4% |
| 3495499 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.58 | 44.0 | 2.86e-01 | 84.1% | 36.7% |
| 3589189 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 48.0 | 4.02e-01 | 100.0% | 52.8% |
| 1537619 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.58 | 39.0 | 2.87e-01 | 71.4% | 87.2% |
| 4954889 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.58 | 45.0 | 4.55e-01 | 100.0% | 87.7% |
| 3320712 | 2003.1.5.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 | 0.57 | 46.0 | 3.42e-01 | 100.0% | 33.1% |
| 4326557 | 387.1.5.3 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › Toxin_3 | 0.57 | 40.0 | 4.03e-01 | 82.5% | 74.6% |
| 3344177 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.56 | 38.0 | 4.12e-01 | 77.8% | 97.8% |
| 3699569 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 48.0 | 4.39e-01 | 100.0% | 72.9% |
| 3644483 | 2003.1.5.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 | 0.56 | 45.0 | 3.05e-01 | 100.0% | 22.0% |
| 5028427 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.56 | 40.0 | 3.49e-01 | 79.4% | 51.4% |
| 3988081 | 306.2.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor › Arg_repressor_C | 0.55 | 44.0 | 4.13e-01 | 100.0% | 70.5% |
| 3590297 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 46.0 | 4.04e-01 | 100.0% | 61.0% |
| 5043392 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.55 | 44.0 | 4.37e-01 | 100.0% | 87.7% |
| 4927192 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 41.0 | 3.73e-01 | 87.3% | 71.6% |
| 3931130 | 4300.1.1.0 ↗ | beta complex topology › Viral glycoprotein ectodomain-like › Viral glycoprotein ectodomain-like › Viral glycoprotein ectodomain-like | 0.54 | 40.0 | 3.07e-01 | 79.4% | 46.0% |
| 4937136 | 101.1.2.650 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7343 | 0.54 | 41.0 | 3.70e-01 | 100.0% | 57.0% |
| 3590570 | 101.1.2.368 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_36 | 0.54 | 44.0 | 3.70e-01 | 100.0% | 50.4% |
| 1147791 | 101.1.2.87 ↗ | alpha arrays › HTH › HTH › winged helix domain › PaaX | 0.53 | 43.0 | 3.75e-01 | 93.7% | 78.6% |
| 4006944 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.53 | 43.0 | 3.81e-01 | 90.5% | 93.7% |
| 4983405 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.52 | 37.0 | 2.85e-01 | 76.2% | 37.4% |
| 5034107 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 42.0 | 3.95e-01 | 100.0% | 72.9% |
| 3224406 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.52 | 41.0 | 3.92e-01 | 92.1% | 82.5% |
| 5031076 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.52 | 41.0 | 3.51e-01 | 92.1% | 54.8% |
| 3588223 | 304.156.1.0 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain | 0.52 | 44.0 | 4.02e-01 | 100.0% | 93.3% |
| 3257129 | 101.1.2.407 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 | 0.52 | 43.0 | 3.62e-01 | 100.0% | 55.0% |
| 4011314 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.52 | 45.0 | 4.19e-01 | 100.0% | 87.5% |
| 4997405 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 40.0 | 3.32e-01 | 100.0% | 43.6% |
| 2076390 | 3012.1.1.1 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase | 0.52 | 45.0 | 4.19e-01 | 100.0% | 83.5% |
| 4929225 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.52 | 44.0 | 3.45e-01 | 100.0% | 82.7% |
| 4977903 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 4.00e-01 | 100.0% | 86.3% |
| 4983659 | 101.1.2.650 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7343 | 0.51 | 39.0 | 3.52e-01 | 100.0% | 57.1% |
| 3928546 | 101.1.2.47 ↗ | alpha arrays › HTH › HTH › winged helix domain › S10_plectin | 0.51 | 44.0 | 3.85e-01 | 100.0% | 67.0% |
| 4862320 | 101.1.2.47 ↗ | alpha arrays › HTH › HTH › winged helix domain › S10_plectin | 0.51 | 44.0 | 3.89e-01 | 100.0% | 72.9% |
| 2106037 | 101.1.2.47 ↗ | alpha arrays › HTH › HTH › winged helix domain › S10_plectin | 0.51 | 44.0 | 3.96e-01 | 100.0% | 73.3% |
| 3099741 | 101.1.2.47 ↗ | alpha arrays › HTH › HTH › winged helix domain › S10_plectin | 0.50 | 44.0 | 3.82e-01 | 100.0% | 72.7% |
| 5029366 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 40.0 | 3.72e-01 | 100.0% | 69.4% |
| 1685013 | 304.1.1.3 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › MDD_C | 0.50 | 38.0 | 3.01e-01 | 85.7% | 89.9% |