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NC_031231.1__YP_009301334.1__BJD78_gp77__00077

Bact-Vir

NC_031231.1__YP_009301334.1__BJD78_gp77__00077

Identity

Accession:
NC_031231 ↗
Kingdom:
phage

Quality

71.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-50
PDB
D2 medium residues 51-119
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4xsgB00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.67 54.0 3.90e-01 89.9% 58.5%
1qs1A02 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.66 54.0 3.91e-01 91.3% 55.3%
1qs1A01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.65 53.0 3.82e-01 91.3% 56.2%
1yqyA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.63 52.0 3.74e-01 91.3% 52.9%
2wn5A01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.63 52.0 3.78e-01 91.3% 58.2%
5wtzA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.63 52.0 3.71e-01 92.8% 54.0%
2b0vA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.62 52.0 4.08e-01 92.8% 64.2%
4dywA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.62 51.0 4.15e-01 89.9% 71.3%
4kyxA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.60 50.0 3.97e-01 91.3% 67.6%
2w4eA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.60 50.0 4.01e-01 92.8% 68.6%
1vk6A02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.60 49.0 3.98e-01 89.9% 66.4%
3fk9A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.60 49.0 3.79e-01 89.9% 60.1%
1v8wA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.60 50.0 3.87e-01 92.8% 59.7%
4jzsA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.59 49.0 3.76e-01 91.3% 55.1%
3hhjB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.59 48.0 3.94e-01 89.9% 71.8%
3eesA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.59 48.0 3.93e-01 89.9% 69.5%
2yyhA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.58 48.0 3.84e-01 91.3% 68.8%
3exqA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.58 46.0 3.67e-01 88.4% 64.6%
6scxA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.58 47.0 3.80e-01 89.9% 64.4%
3e57A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.57 49.0 3.73e-01 100.0% 78.3%
1mk1A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.57 47.0 3.48e-01 92.8% 50.8%
2q1fA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 42.0 2.90e-01 82.6% 91.0%
5cfjA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.56 46.0 3.69e-01 91.3% 71.4%
2j3xA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.56 44.0 3.23e-01 91.3% 51.8%
2fkbC00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.56 48.0 3.72e-01 100.0% 71.9%
2fmlA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.56 46.0 3.50e-01 91.3% 62.2%
2azwA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.56 45.0 3.59e-01 91.3% 63.7%
3kf8A00 2.40.50.1040 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 48.0 3.47e-01 100.0% 64.7%
8bveA03 2.40.340.10 Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV 0.55 35.0 3.51e-01 84.1% 62.5%
1ktgA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.55 45.0 3.62e-01 91.3% 70.8%
3gg6A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.55 47.0 3.76e-01 98.6% 64.6%
3gz8C01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.54 43.0 3.49e-01 88.4% 71.3%
1k2eA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.54 42.0 3.39e-01 89.9% 68.4%
6ethA04 2.40.340.10 Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV 0.53 35.0 3.27e-01 87.0% 53.9%
3rh7A02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.52 43.0 3.62e-01 95.7% 66.7%
4ifdI01 2.40.50.880 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 41.0 3.86e-01 91.3% 69.8%
3i9xA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.52 41.0 3.30e-01 92.8% 72.6%
4lniJ01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.51 41.0 3.72e-01 94.2% 84.6%
3lltA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.51 42.0 3.01e-01 98.6% 32.7%
4hppA01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.51 39.0 3.54e-01 87.0% 93.1%
2x8xX03 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.51 40.0 3.76e-01 85.5% 100.0%
3h95A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.51 40.0 3.26e-01 87.0% 63.4%
5zliA01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.50 40.0 3.59e-01 92.8% 84.9%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1562728 237.1.1.8 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.67 54.0 3.90e-01 89.9% 58.5%
149351 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.62 51.0 4.15e-01 89.9% 71.3%
3963831 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.62 51.0 4.08e-01 89.9% 69.6%
5039326 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.62 51.0 4.04e-01 89.9% 65.7%
3988733 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.62 51.0 3.96e-01 91.3% 61.7%
5027673 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.61 53.0 4.09e-01 97.1% 74.2%
3509290 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.60 49.0 4.21e-01 89.9% 83.6%
3703275 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 44.0 3.78e-01 88.4% 47.8%
1088358 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.59 49.0 3.95e-01 91.3% 66.4%
2387820 237.1.1.22 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › SidE_mART 0.59 48.0 3.17e-01 91.3% 41.3%
3196372 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.59 49.0 3.68e-01 94.2% 68.0%
4156752 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.58 50.0 3.80e-01 98.6% 73.1%
5058171 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.58 45.0 3.70e-01 85.5% 69.8%
2809851 237.1.1.22 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › SidE_mART 0.57 46.0 3.75e-01 92.8% 88.8%
4969371 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.57 45.0 3.75e-01 89.9% 70.8%
5038971 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.56 45.0 3.80e-01 88.4% 71.4%
3229470 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.56 46.0 3.00e-01 92.8% 91.6%
4937960 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.56 47.0 3.88e-01 92.8% 76.0%
2146540 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.56 44.0 3.57e-01 88.4% 66.2%
4232994 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.55 44.0 3.87e-01 89.9% 60.0%
5058232 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.55 45.0 3.72e-01 91.3% 72.3%
5041586 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.55 44.0 3.61e-01 91.3% 69.3%
4605745 2004.1.1.164 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc 0.55 47.0 3.29e-01 95.7% 52.4%
4935762 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.55 43.0 3.51e-01 88.4% 68.6%
2528751 2.1.1.25 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 0.55 37.0 3.84e-01 71.0% 77.4%
3407467 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.55 44.0 3.41e-01 92.8% 57.1%
4937691 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.55 47.0 3.80e-01 97.1% 66.7%
3200127 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.54 46.0 3.11e-01 95.7% 47.4%
4956845 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.54 43.0 3.49e-01 87.0% 62.3%
4013718 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.54 44.0 3.37e-01 94.2% 74.9%
2557339 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.54 45.0 4.00e-01 98.6% 82.4%
5004416 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 45.0 4.02e-01 100.0% 87.6%
3708545 59.1.1.0 beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like 0.53 40.0 3.93e-01 85.5% 97.5%
3415898 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.53 45.0 3.24e-01 94.2% 57.0%
3590404 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 40.0 3.54e-01 87.0% 54.3%
5058152 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.53 40.0 3.25e-01 81.2% 63.8%
3598675 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 45.0 3.30e-01 94.2% 59.8%
3485401 59.1.1.0 beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like 0.53 41.0 3.32e-01 88.4% 66.9%
3594480 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 43.0 3.15e-01 89.9% 56.4%
3612182 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 37.0 3.40e-01 73.9% 95.6%
5079541 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.52 41.0 3.24e-01 88.4% 63.1%
3479356 2004.1.1.164 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc 0.52 43.0 3.18e-01 92.8% 59.5%
1124600 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.52 41.0 3.32e-01 89.9% 71.1%
3989066 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.51 40.0 3.21e-01 88.4% 72.0%
3608009 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.51 43.0 3.11e-01 94.2% 53.0%