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NC_031238.1__YP_009301885.1__BJD80_gp048__00062
Bact-VirNC_031238.1__YP_009301885.1__BJD80_gp048__00062
Identity
- Accession:
- NC_031238 ↗
- Kingdom:
- phage
Quality
75.6
mean pLDDT
Taxonomy
TaxID: 1792253
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-64
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n5fA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 54.0 | 3.88e-01 | 87.2% | 48.2% |
| 3fn2A00 | 3.30.2200.10 | Alpha Beta › 2-Layer Sandwich › histidine kinase doma clostridium symbiosum atcc 14940 › histidine kinase doma clostridium symbiosum atcc 14940 | 0.63 | 46.0 | 3.48e-01 | 79.5% | 38.1% |
| 2arhA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 46.0 | 3.20e-01 | 87.2% | 27.8% |
| 1f8vC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 43.0 | 2.61e-01 | 79.5% | 10.0% |
| 1vx4407 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 42.0 | 3.68e-01 | 76.9% | 50.7% |
| 1d6uA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.58 | 41.0 | 2.37e-01 | 76.9% | 18.5% |
| 4pfyA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.57 | 44.0 | 3.14e-01 | 97.4% | 59.2% |
| 5brqA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 44.0 | 3.72e-01 | 100.0% | 72.8% |
| 1uokA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 44.0 | 3.72e-01 | 100.0% | 73.1% |
| 2rkuA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 38.0 | 3.20e-01 | 84.6% | 59.6% |
| 3pv7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 41.0 | 3.39e-01 | 100.0% | 86.2% |
| 3ljsA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 38.0 | 2.31e-01 | 82.1% | 21.1% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4939518 | 304.4.1.82 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF3303 | 0.59 | 46.0 | 3.74e-01 | 92.3% | 44.7% |
| 4980882 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.58 | 40.0 | 3.33e-01 | 79.5% | 42.2% |
| 3977912 | 12.1.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Malt_amylase_C | 0.56 | 45.0 | 3.81e-01 | 100.0% | 73.3% |
| 3379294 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.53 | 42.0 | 2.86e-01 | 100.0% | 42.8% |