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NC_031247.1__YP_009302794.1__BJD67_gp37__00037
Bact-VirNC_031247.1__YP_009302794.1__BJD67_gp37__00037
Identity
- Accession:
- NC_031247 ↗
- Kingdom:
- phage
Quality
86.0
mean pLDDT
Taxonomy
TaxID: 1821551
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-64
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_15340_prodigal-single.1__X__X__00357__D6-59
D2
medium
residues 65-123
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 43.0 | 4.70e-01 | 93.2% | 97.7% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 43.0 | 4.01e-01 | 84.7% | 56.6% |
| 2mqkA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 41.0 | 4.02e-01 | 81.4% | 63.1% |
| 1oj6A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 49.0 | 3.66e-01 | 89.8% | 46.3% |
| 3bhwA00 | 1.10.3540.10 | Mainly Alpha › Orthogonal Bundle › fold of a uncharacterized protein from magnetospirillum magneticum › uncharacterized protein from magnetospirillum magneticum domain | 0.59 | 50.0 | 3.59e-01 | 100.0% | 31.3% |
| 1u0jA01 | 1.10.10.950 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.58 | 49.0 | 5.06e-01 | 93.2% | 100.0% |
| 2qgnA02 | 1.10.287.890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 0.57 | 42.0 | 3.84e-01 | 81.4% | 79.3% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.56 | 38.0 | 3.69e-01 | 81.4% | 64.1% |
| 2dodA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.56 | 47.0 | 4.31e-01 | 100.0% | 72.0% |
| 1x0tA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.53 | 43.0 | 4.31e-01 | 96.6% | 85.2% |
| 2fb5A01 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.53 | 36.0 | 3.42e-01 | 81.4% | 58.3% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.53 | 44.0 | 3.95e-01 | 100.0% | 75.3% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.52 | 40.0 | 3.89e-01 | 84.7% | 73.8% |
| 1x4pA00 | 1.10.10.790 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module | 0.52 | 41.0 | 4.07e-01 | 100.0% | 84.8% |
| 2p5tA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.52 | 36.0 | 3.18e-01 | 79.7% | 47.8% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.51 | 37.0 | 3.36e-01 | 79.7% | 57.0% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 37.0 | 3.37e-01 | 79.7% | 67.9% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.50 | 36.0 | 3.21e-01 | 86.4% | 52.9% |
| 1ku9A02 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.50 | 35.0 | 3.52e-01 | 91.5% | 71.9% |
| 1tfkB00 | 1.20.120.650 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Colicin D | 0.50 | 36.0 | 3.18e-01 | 76.3% | 57.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3412191 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.64 | 38.0 | 3.38e-01 | 84.7% | 42.4% |
| 3929678 | 109.54.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 | 0.61 | 48.0 | 3.89e-01 | 100.0% | 45.2% |
| 3737948 | 101.1.17.2 ↗ | alpha arrays › HTH › HTH › FF domain › FF | 0.60 | 53.0 | 5.31e-01 | 100.0% | 100.0% |
| 3244600 | 101.1.2.178 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_61 | 0.60 | 50.0 | 4.19e-01 | 94.9% | 88.6% |
| 3289244 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.56 | 45.0 | 4.46e-01 | 93.2% | 84.6% |
| 3690135 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.56 | 38.0 | 3.14e-01 | 72.9% | 81.7% |
| 4382041 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.55 | 46.0 | 4.54e-01 | 100.0% | 87.7% |
| 3714293 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.54 | 44.0 | 4.37e-01 | 98.3% | 98.5% |
| 5061261 | 4133.1.1.0 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like | 0.52 | 45.0 | 4.42e-01 | 100.0% | 89.1% |
| 3651776 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.52 | 36.0 | 2.66e-01 | 86.4% | 23.7% |
| 3956134 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 40.0 | 4.15e-01 | 93.2% | 100.0% |