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NC_031249.1__YP_009302877.1__BJD58_gp41__00041
Bact-VirNC_031249.1__YP_009302877.1__BJD58_gp41__00041
Identity
- Accession:
- NC_031249 ↗
- Kingdom:
- phage
Quality
86.2
mean pLDDT
Taxonomy
TaxID: 1821563
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 78-139
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.69 | 51.0 | 4.76e-01 | 96.8% | 62.8% |
| 2ethA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 49.0 | 3.72e-01 | 75.8% | 70.9% |
| 2gxgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 49.0 | 3.76e-01 | 88.7% | 72.9% |
| 1vw4H00 | 3.90.1180.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L13p; Chain: A; › Ribosomal protein L13 | 0.55 | 36.0 | 2.86e-01 | 72.6% | 29.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3423775 | 601.16.1.8 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › DUF1218 | 0.66 | 45.0 | 3.32e-01 | 71.0% | 71.0% |
| 5018010 | 109.4.1.202 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 | 0.64 | 47.0 | 2.92e-01 | 77.4% | 16.3% |
| 3289932 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.64 | 56.0 | 4.32e-01 | 98.4% | 80.0% |
| 3607907 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.59 | 52.0 | 3.46e-01 | 100.0% | 79.2% |
| 4138755 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.57 | 48.0 | 3.81e-01 | 96.8% | 80.7% |
| 4025323 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 49.0 | 3.21e-01 | 100.0% | 48.4% |
| None | — | 0.55 | 41.0 | 3.44e-01 | 77.4% | 57.0% | |
| 4016140 | 620.1.1.4 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DUF1993 | 0.55 | 46.0 | 3.45e-01 | 100.0% | 61.7% |
| None | — | 0.54 | 41.0 | 2.54e-01 | 88.7% | 22.1% | |
| 5061945 | 245.1.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 | 0.52 | 41.0 | 4.08e-01 | 87.1% | 100.0% |