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NC_031251.1__YP_009303024.1__SEA_SOILASSASSIN_29__00029

Bact-Vir

NC_031251.1__YP_009303024.1__SEA_SOILASSASSIN_29__00029

Identity

Accession:
NC_031251 ↗
Kingdom:
phage

Quality

57.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Attisvirus› Gordonia_phage_SoilAssassin

TaxID: 1821562

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 14-142_207-228
PDB
Domain cluster: rep: MH479923.1__AXH46490.1__SEA_ROBINSPARKLES_41__00041__D278-455
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qc5X01 2.60.40.3260 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 49.0 5.05e-01 91.4% 78.8%
8owfA01 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 42.0 4.74e-01 89.4% 95.5%
2qjvA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 39.0 4.41e-01 72.8% 88.5%
4madA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 40.0 4.25e-01 76.8% 77.6%
2p17A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 49.0 4.16e-01 90.1% 83.5%
3d3aA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 40.0 4.29e-01 76.8% 80.6%
4i3gA03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.57 40.0 4.60e-01 89.4% 100.0%
4e8dA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 40.0 4.21e-01 76.8% 78.3%
2rttA00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 39.0 4.52e-01 86.1% 99.0%
1m1sA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 39.0 4.51e-01 82.8% 97.2%
2okxA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 47.0 4.33e-01 86.8% 99.5%
6qe7A01 3.90.182.10 Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 0.57 40.0 4.23e-01 84.1% 80.1%
3l81A02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.56 40.0 4.54e-01 86.8% 100.0%
6qdiA02 3.90.182.10 Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 0.55 39.0 4.10e-01 84.8% 80.3%
4ei0A01 2.60.40.3550 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 0.53 42.0 4.35e-01 82.8% 92.9%
4oi4C01 2.60.120.1030 Mainly Beta › Sandwich › Jelly Rolls › Clp1, DNA binding domain 0.53 30.0 3.82e-01 70.2% 100.0%
3w5nA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 43.0 4.23e-01 88.7% 99.4%
6etzA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 46.0 4.14e-01 94.7% 84.9%
4mloA01 2.60.120.810 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 4.39e-01 93.4% 91.2%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3519565 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.66 44.0 5.12e-01 86.8% 95.2%
3916306 10.32.1.179 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_C 0.66 43.0 5.05e-01 78.1% 95.2%
5045052 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 45.0 5.23e-01 89.4% 97.3%
3999209 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 44.0 4.86e-01 77.5% 86.7%
5047632 10.1.2.183 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC 0.64 45.0 5.25e-01 87.4% 100.0%
2448635 10.32.1.88 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glyco_hydro_2_N2 0.63 48.0 4.71e-01 78.8% 91.3%
4947721 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 49.0 5.31e-01 91.4% 100.0%
3992318 10.32.1.177 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › UPF0669 0.61 48.0 5.10e-01 92.7% 92.6%
5014962 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 49.0 5.22e-01 92.7% 97.7%
5001285 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 46.0 4.22e-01 80.1% 86.5%
3933211 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 42.0 4.69e-01 87.4% 93.0%
5037452 10.12.1.22 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › KduI 0.60 51.0 4.24e-01 92.7% 84.8%
3597620 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 43.0 4.35e-01 94.7% 75.3%
5027060 5095.1.1.1 ↗ beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › PA14 0.59 41.0 4.43e-01 84.8% 83.1%
3744243 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.58 41.0 4.78e-01 90.1% 100.0%
1391053 10.32.1.73 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD_1 0.58 40.0 4.01e-01 76.8% 67.5%
3228364 2006.1.6.33 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 0.58 50.0 3.55e-01 92.1% 87.2%
1498219 10.32.1.79 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › RhaB_D2 0.57 45.0 4.23e-01 80.8% 95.5%
5020631 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 47.0 4.68e-01 95.4% 82.5%
3525668 10.32.1.69 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B 0.57 50.0 4.41e-01 94.7% 94.1%
2499733 5095.1.1.1 ↗ beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › PA14 0.57 40.0 4.06e-01 84.1% 73.0%
5027268 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 44.0 4.43e-01 83.4% 100.0%
4978088 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 40.0 4.57e-01 92.7% 98.3%
3620151 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 39.0 4.43e-01 74.2% 100.0%
3591997 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 41.0 4.41e-01 94.0% 91.5%
4968966 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 41.0 4.48e-01 90.1% 96.8%
5026285 10.12.1.26 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Pirin_C 0.53 44.0 3.72e-01 89.4% 86.7%
4984453 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.52 42.0 3.86e-01 84.1% 93.8%
5043411 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.50 40.0 4.33e-01 84.8% 100.0%
3663362 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.50 45.0 4.45e-01 97.4% 100.0%