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NC_031252.1__YP_009303109.1__BJD79_gp40__00040

Bact-Vir

NC_031252.1__YP_009303109.1__BJD79_gp40__00040

Identity

Accession:
NC_031252 ↗
Kingdom:
phage

Quality

61.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-74
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h37A03 1.20.58.1960 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 50.0 3.85e-01 81.0% 82.8%
6yigA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 50.0 4.43e-01 100.0% 84.1%
2hoqA02 1.10.150.520 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.58 43.0 3.99e-01 82.8% 74.7%
2zg6A02 1.10.150.660 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.54 43.0 4.07e-01 87.9% 73.6%
3dxlA01 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.53 40.0 3.12e-01 87.9% 89.1%
3nbiA01 1.10.8.1020 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain 0.51 42.0 4.23e-01 93.1% 100.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5013695 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.62 52.0 4.80e-01 94.8% 76.0%
3262704 912.1.1.13 few secondary structure elements › HIV-1 VPU cytoplasmic domain › HIV-1 VPU cytoplasmic domain › HIV-1 VPU cytoplasmic domain › SPRING1 0.56 49.0 4.60e-01 100.0% 100.0%
3735460 103.11.1.1 alpha arrays › RuvA-C › RMI1 N-terminal helical domain-related › RMI1 N-terminal helical domain-related › RMI1_N_N 0.55 41.0 4.16e-01 89.7% 85.5%
4990528 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.52 43.0 3.89e-01 98.3% 91.8%