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NC_031253.1__YP_009303232.1__KCH39_gp092__00084
Bact-VirNC_031253.1__YP_009303232.1__KCH39_gp092__00084
Identity
- Accession:
- NC_031253 ↗
- Kingdom:
- phage
Quality
84.9
mean pLDDT
Taxonomy
TaxID: 1805457
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-88
Domain cluster:
rep: NC_051726.1__YP_009964157.1__I5J36_gp47__00047__D10-90
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1no1A00 | 1.10.8.200 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Replisome organizer (g39p helicase loader/inhibitor protein) | 0.89 | 69.0 | 7.69e-01 | 84.1% | 100.0% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.67 | 30.0 | 3.35e-01 | 92.7% | 52.9% |
| 2lrmA00 | 1.10.890.30 | Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein | 0.65 | 45.0 | 4.49e-01 | 72.0% | 71.4% |
| 1oaiA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.63 | 39.0 | 4.49e-01 | 75.6% | 86.4% |
| 7craA02 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 43.0 | 4.15e-01 | 70.7% | 98.9% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.62 | 31.0 | 3.07e-01 | 91.5% | 44.7% |
| 3b0cW00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.61 | 37.0 | 3.84e-01 | 100.0% | 65.8% |
| 3mkzN00 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 48.0 | 4.42e-01 | 87.8% | 66.4% |
| 2igsA00 | 1.10.3690.10 | Mainly Alpha › Orthogonal Bundle › PA2222-like fold › PA2222-like domain | 0.60 | 47.0 | 3.54e-01 | 86.6% | 89.7% |
| 4dbgB02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.59 | 41.0 | 4.66e-01 | 93.9% | 96.7% |
| 1w2yA00 | 1.10.4010.10 | Mainly Alpha › Orthogonal Bundle › all-alpha NTP pyrophosphatase fold › Type II deoxyuridine triphosphatase | 0.57 | 47.0 | 3.42e-01 | 90.2% | 91.2% |
| 4akgA08 | 1.10.472.130 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain | 0.57 | 44.0 | 3.66e-01 | 86.6% | 69.9% |
| 2auaA02 | 1.10.3800.10 | Mainly Alpha › Orthogonal Bundle › ADP-ribosylation fold › ADP-ribosylation domain | 0.56 | 30.0 | 2.98e-01 | 72.0% | 45.1% |
| 4fr2A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.55 | 38.0 | 2.90e-01 | 70.7% | 66.3% |
| 3lcvB01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.55 | 37.0 | 4.26e-01 | 93.9% | 100.0% |
| 1vfpB02 | 1.20.1110.10 | Mainly Alpha › Up-down Bundle › Calcium-transporting ATPase, transmembrane domain › Calcium-transporting ATPase, transmembrane domain | 0.55 | 47.0 | 3.06e-01 | 98.8% | 37.5% |
| 1oj7A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.55 | 37.0 | 2.87e-01 | 70.7% | 66.2% |
| 1rrmA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.55 | 37.0 | 2.86e-01 | 70.7% | 65.0% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.54 | 36.0 | 4.22e-01 | 70.7% | 100.0% |
| 3bvxA02 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.54 | 38.0 | 3.43e-01 | 73.2% | 82.9% |
| 4jzaA03 | 1.20.120.1720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.53 | 44.0 | 3.55e-01 | 89.0% | 90.8% |
| 6pmiF01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.53 | 41.0 | 4.18e-01 | 85.4% | 97.5% |
| 4nqwA01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.53 | 40.0 | 3.99e-01 | 81.7% | 90.5% |
| 3rguB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.52 | 36.0 | 3.55e-01 | 70.7% | 98.9% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.51 | 39.0 | 3.86e-01 | 84.1% | 96.5% |
| 4fbcA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.50 | 35.0 | 2.86e-01 | 73.2% | 45.4% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2391 | 571.1.1.1 ↗ | alpha arrays › Replisome organizer (g39p helicase loader/inhibitor protein) › Replisome organizer (g39p helicase loader/inhibitor protein) › Replisome organizer (g39p helicase loader/inhibitor protein) › G39P_N | 0.89 | 69.0 | 7.64e-01 | 84.1% | 98.5% |
| 4179239 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.74 | 67.0 | 6.18e-01 | 100.0% | 82.9% |
| 5080893 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.65 | 53.0 | 5.37e-01 | 100.0% | 93.8% |
| 3722053 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.64 | 55.0 | 5.47e-01 | 100.0% | 94.1% |
| 3254417 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 48.0 | 4.96e-01 | 93.9% | 92.0% |
| 3902977 | 604.1.1.67 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_5 | 0.61 | 32.0 | 2.98e-01 | 91.5% | 41.0% |
| 5059610 | 148.1.3.403 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RNA_pol_Rpb1_5 | 0.61 | 48.0 | 4.00e-01 | 98.8% | 47.1% |
| 3979277 | 101.1.1.44 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › ParB | 0.60 | 51.0 | 4.51e-01 | 97.6% | 68.8% |
| 3732476 | 3755.4.1.5 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Dynactin | 0.56 | 47.0 | 3.72e-01 | 95.1% | 67.8% |
| 4961802 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.56 | 41.0 | 4.46e-01 | 96.3% | 98.5% |
| 4999731 | 4002.1.1.5 ↗ | alpha bundles › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › ADH_Fe_C | 0.56 | 38.0 | 2.86e-01 | 70.7% | 59.1% |
| 3502904 | 611.8.1.0 ↗ | alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 | 0.55 | 44.0 | 3.63e-01 | 85.4% | 82.1% |
| 3229657 | 148.1.3.27 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_10 | 0.55 | 47.0 | 4.75e-01 | 96.3% | 100.0% |
| 3009331 | 4044.1.1.1 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane | 0.55 | 38.0 | 3.87e-01 | 73.2% | 96.4% |
| 4946621 | 171.1.1.16 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › dsrm | 0.54 | 39.0 | 3.27e-01 | 79.3% | 72.9% |
| 4602459 | 3254.1.1.1 ↗ | alpha arrays › helical domain in flagellar biosynthesis protein flhA › helical domain in flagellar biosynthesis protein flhA › helical domain in flagellar biosynthesis protein flhA › FHIPEP | 0.53 | 44.0 | 4.31e-01 | 98.8% | 97.9% |
| 4113507 | 148.1.2.1 ↗ | alpha arrays › Histone-like › Histone-related › double Clp-N › Clp_N | 0.52 | 39.0 | 3.21e-01 | 80.5% | 77.5% |
| 3930447 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.52 | 43.0 | 3.55e-01 | 93.9% | 71.2% |
| 3231541 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 39.0 | 2.70e-01 | 90.2% | 22.7% |
| 4990111 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.51 | 35.0 | 3.24e-01 | 70.7% | 80.0% |
| 4932991 | 4002.1.1.5 ↗ | alpha bundles › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › ADH_Fe_C | 0.50 | 41.0 | 3.23e-01 | 96.3% | 97.1% |