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NC_031262.1__YP_009303900.1__BJD73_gp61__00061
Bact-VirNC_031262.1__YP_009303900.1__BJD73_gp61__00061
Identity
- Accession:
- NC_031262 ↗
- Kingdom:
- phage
Quality
77.7
mean pLDDT
Taxonomy
TaxID: 1815608
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 48-256
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
D2
high
residues 265-460
Domain cluster:
rep: IMGVR_UViG_3300026211_000011-3300026211-Ga0208132_10019531__D46-252
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00271.38 best | Helicase_C | 30.9 | 3.70e-07 | 58.2% | 97.3% |
D3
medium
residues 475-493_1123-1136_1155-1183
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1llaA03 | 1.10.1280.10 | Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase | 0.51 | 35.0 | 2.37e-01 | 72.6% | 27.9% |
D4
medium
residues 494-509_1097-1122_1137-1154
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4yheA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 41.0 | 2.60e-01 | 86.7% | 56.3% |
| 3c6cA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 46.0 | 3.02e-01 | 100.0% | 86.7% |
| 1knwA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.53 | 43.0 | 3.00e-01 | 98.3% | 93.1% |
| 2bdtA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 42.0 | 3.16e-01 | 100.0% | 74.3% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030756 | 2004.1.1.88 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW | 0.54 | 45.0 | 3.20e-01 | 100.0% | 65.2% |
| 5023799 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 39.0 | 2.95e-01 | 88.3% | 84.0% |
D5
medium
residues 510-685
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zigA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.82 | 65.0 | 5.80e-01 | 100.0% | 60.6% |
| 3dp7A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.81 | 39.0 | 4.08e-01 | 79.5% | 50.6% |
| 1qzzA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.80 | 40.0 | 4.10e-01 | 80.1% | 50.9% |
| 1m6eX02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.78 | 44.0 | 4.06e-01 | 80.7% | 45.3% |
| 1booA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.78 | 63.0 | 5.26e-01 | 100.0% | 52.1% |
| 4u1qA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.78 | 41.0 | 4.00e-01 | 80.1% | 48.7% |
| 2efjA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.77 | 43.0 | 4.03e-01 | 80.1% | 45.3% |
| 7f4oA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.77 | 49.0 | 4.73e-01 | 99.4% | 57.1% |
| 4hh4C01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.76 | 38.0 | 3.69e-01 | 81.8% | 44.4% |
| 5f2kB02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.73 | 42.0 | 3.88e-01 | 79.5% | 46.3% |
| 3merA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.71 | 39.0 | 4.02e-01 | 80.7% | 55.5% |
| 3h2bB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.70 | 39.0 | 3.75e-01 | 80.1% | 49.0% |
| 3e23A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.70 | 41.0 | 3.98e-01 | 80.7% | 52.5% |
| 7wm5A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.69 | 42.0 | 3.93e-01 | 100.0% | 51.2% |
| 2i62A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 42.0 | 3.64e-01 | 80.1% | 41.6% |
| 1hnnA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 43.0 | 3.70e-01 | 80.7% | 42.1% |
| 7cluA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 39.0 | 3.58e-01 | 79.0% | 46.1% |
| 3hnrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 40.0 | 3.91e-01 | 80.7% | 57.0% |
| 2ld4A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 40.0 | 4.08e-01 | 83.0% | 65.7% |
| 2as0A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 39.0 | 3.65e-01 | 80.1% | 50.5% |
| 1vl5C00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 47.0 | 4.36e-01 | 80.1% | 71.4% |
| 3dliA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 44.0 | 4.09e-01 | 79.0% | 60.2% |
| 1d2gA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 35.0 | 3.44e-01 | 79.5% | 52.7% |
| 1kpgD00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 46.0 | 3.85e-01 | 79.0% | 56.5% |
| 5gm2K01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 43.0 | 4.00e-01 | 80.7% | 61.0% |
| 1xxlA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 43.0 | 3.95e-01 | 78.4% | 94.9% |
| 1ri5A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 43.0 | 3.79e-01 | 79.5% | 63.9% |
| 4ruwA01 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.56 | 41.0 | 3.49e-01 | 100.0% | 46.5% |
| 4fzvA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 42.0 | 3.83e-01 | 80.1% | 61.1% |
| 3uj9A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 41.0 | 3.65e-01 | 77.8% | 81.8% |
| 1ej0A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 39.0 | 3.97e-01 | 76.1% | 88.3% |
| 5fcdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 40.0 | 3.70e-01 | 78.4% | 92.5% |
| 3e7pA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 39.0 | 3.49e-01 | 77.8% | 85.4% |
| 7fbhB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 39.0 | 3.52e-01 | 76.1% | 73.5% |
| 3l8dA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 39.0 | 3.74e-01 | 78.4% | 91.1% |
| 2p7iA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 38.0 | 3.56e-01 | 78.4% | 91.6% |
| 3m33A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 38.0 | 3.61e-01 | 78.4% | 81.5% |
| 5je6A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 37.0 | 3.41e-01 | 76.1% | 88.0% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5042985 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.87 | 67.0 | 5.75e-01 | 99.4% | 53.7% |
| 4934991 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.86 | 70.0 | 6.04e-01 | 99.4% | 56.9% |
| 4959366 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.86 | 65.0 | 6.16e-01 | 83.5% | 67.5% |
| None | — | 0.86 | 65.0 | 5.65e-01 | 99.4% | 54.4% | |
| 4967058 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.85 | 70.0 | 5.98e-01 | 99.4% | 56.2% |
| 346155 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.85 | 65.0 | 5.78e-01 | 100.0% | 58.2% |
| 4960127 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.85 | 70.0 | 5.70e-01 | 99.4% | 50.5% |
| 4988478 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.84 | 61.0 | 4.99e-01 | 83.0% | 43.7% |
| 4622863 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.82 | 70.0 | 5.72e-01 | 99.4% | 51.7% |
| 4968397 | 2.6.1.8 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › N6_N4_Mtase | 0.82 | 74.0 | 5.44e-01 | 99.4% | 39.3% |
| 5070667 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.82 | 68.0 | 5.90e-01 | 99.4% | 60.0% |
| 3838925 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.81 | 77.0 | 6.46e-01 | 99.4% | 66.8% |
| 4457765 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.81 | 74.0 | 6.25e-01 | 99.4% | 61.1% |
| 4966290 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.81 | 74.0 | 6.02e-01 | 99.4% | 55.7% |
| 5036708 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.81 | 59.0 | 5.29e-01 | 99.4% | 55.7% |
| 4999848 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.80 | 60.0 | 5.19e-01 | 78.4% | 52.9% |
| 5065486 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.80 | 70.0 | 6.05e-01 | 99.4% | 61.9% |
| 3512712 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.79 | 58.0 | 4.02e-01 | 99.4% | 24.5% |
| 5073115 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.79 | 45.0 | 4.33e-01 | 81.2% | 50.3% |
| 4993334 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.79 | 45.0 | 4.22e-01 | 80.7% | 48.5% |
| 4999515 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.78 | 61.0 | 5.12e-01 | 79.5% | 52.6% |
| 5001667 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.78 | 69.0 | 5.68e-01 | 99.4% | 54.7% |
| 4958441 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.77 | 60.0 | 5.19e-01 | 79.5% | 54.9% |
| 4963515 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.76 | 73.0 | 5.87e-01 | 100.0% | 85.8% |
| 4997728 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.75 | 67.0 | 5.70e-01 | 99.4% | 60.7% |
| 4995700 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.74 | 59.0 | 5.01e-01 | 100.0% | 54.0% |
| 3283914 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.74 | 40.0 | 3.93e-01 | 80.1% | 50.3% |
| 3928319 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.73 | 43.0 | 3.89e-01 | 81.8% | 44.3% |
| None | — | 0.73 | 42.0 | 3.81e-01 | 80.7% | 43.6% | |
| 4507224 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.72 | 69.0 | 5.70e-01 | 99.4% | 61.4% |
| 5067281 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.72 | 55.0 | 4.27e-01 | 78.4% | 39.4% |
| 3277079 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.71 | 56.0 | 5.03e-01 | 99.4% | 61.3% |
| 362190 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.71 | 39.0 | 3.74e-01 | 79.5% | 48.7% |
| 3297008 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 38.0 | 5.17e-01 | 75.0% | 100.0% |
| 5080913 | 2003.1.5.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 | 0.69 | 53.0 | 3.68e-01 | 81.8% | 27.5% |
| 2167678 | 2003.1.5.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › NNMT_PNMT_TEMT | 0.69 | 41.0 | 3.60e-01 | 79.5% | 41.4% |
| None | — | 0.68 | 47.0 | 4.24e-01 | 100.0% | 53.0% | |
| 5036719 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.68 | 65.0 | 5.18e-01 | 100.0% | 76.9% |
| 4929709 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.68 | 65.0 | 5.48e-01 | 100.0% | 83.3% |
| 4948115 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.68 | 65.0 | 5.17e-01 | 100.0% | 76.9% |
| 149618 | 2003.1.5.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › NNMT_PNMT_TEMT | 0.68 | 42.0 | 3.65e-01 | 79.5% | 42.0% |
| 5075207 | 2003.1.5.55 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA | 0.68 | 44.0 | 4.09e-01 | 96.6% | 52.6% |
| 2546531 | 2003.1.5.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › NNMT_PNMT_TEMT | 0.67 | 42.0 | 3.54e-01 | 80.7% | 39.6% |
| 4284129 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.66 | 50.0 | 4.25e-01 | 96.0% | 49.5% |
| 5049716 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.65 | 59.0 | 5.03e-01 | 100.0% | 63.0% |
| 3516032 | 2003.1.5.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › NNMT_PNMT_TEMT | 0.64 | 37.0 | 3.31e-01 | 79.5% | 40.6% |
| 3173979 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.64 | 50.0 | 3.58e-01 | 80.1% | 42.1% |
| None | — | 0.64 | 43.0 | 3.90e-01 | 80.1% | 52.4% | |
| 4025668 | 2003.1.5.44 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MT-A70 | 0.63 | 53.0 | 4.34e-01 | 99.4% | 49.5% |
| 4943016 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.63 | 40.0 | 3.88e-01 | 77.8% | 57.9% |
| 3298833 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.63 | 42.0 | 3.83e-01 | 80.1% | 51.7% |
| 3279773 | 2003.1.5.152 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › CMAS, Methyltransf_25 | 0.62 | 47.0 | 4.01e-01 | 79.5% | 57.9% |
| 5039763 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.61 | 58.0 | 4.82e-01 | 100.0% | 86.0% |
| 3968398 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.60 | 44.0 | 4.02e-01 | 82.4% | 59.1% |
| 3965321 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.60 | 42.0 | 4.10e-01 | 80.7% | 65.1% |
| 3949887 | 2003.1.5.152 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › CMAS, Methyltransf_25 | 0.58 | 46.0 | 3.86e-01 | 81.8% | 56.9% |
| 2702891 | 2003.1.5.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › mRNA_G-N7_MeTrfase | 0.58 | 45.0 | 3.88e-01 | 79.5% | 63.9% |
| 4537275 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.57 | 45.0 | 3.94e-01 | 81.8% | 57.3% |
| 3182444 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.57 | 44.0 | 3.57e-01 | 79.5% | 53.9% |
| 4014072 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.55 | 37.0 | 3.75e-01 | 80.7% | 66.7% |
| 3965007 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.54 | 41.0 | 3.67e-01 | 78.4% | 84.4% |
D6
medium
residues 686-767
D7
medium
residues 768-820_1079-1096
Domain cluster:
rep: NC_052663.1__YP_009987405.1__JR328_gp161__00196__D254-312_575-608
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13403.12 best | Hint_2 | 28.8 | 2.00e-06 | 83.1% | 30.6% |
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mi8A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.94 | 84.0 | 6.49e-01 | 94.4% | 92.9% |
| 1am2A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.91 | 80.0 | 5.72e-01 | 93.0% | 95.6% |
| 6zgqA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.89 | 76.0 | 5.78e-01 | 90.1% | 91.8% |
| 1at0A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.88 | 76.0 | 5.86e-01 | 91.5% | 93.1% |
| 2lwyA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.88 | 79.0 | 6.17e-01 | 95.8% | 92.8% |
| 1dfaA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.86 | 73.0 | 5.16e-01 | 91.5% | 95.5% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 52.0 | 5.28e-01 | 77.5% | 92.8% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 50.0 | 5.22e-01 | 77.5% | 92.3% |
| 5c94A00 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.66 | 49.0 | 4.18e-01 | 78.9% | 71.6% |
| 6vgwA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.66 | 61.0 | 4.77e-01 | 100.0% | 53.2% |
| 1qz8A01 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.63 | 45.0 | 4.03e-01 | 77.5% | 80.0% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.61 | 46.0 | 3.49e-01 | 78.9% | 88.6% |
| 5lpeB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 45.0 | 4.17e-01 | 78.9% | 83.9% |
| 2vlgC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 47.0 | 4.23e-01 | 87.3% | 95.1% |
| 3h7tA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 44.0 | 3.85e-01 | 80.3% | 77.5% |
| 1a7sA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 45.0 | 3.99e-01 | 83.1% | 83.8% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.58 | 49.0 | 4.37e-01 | 94.4% | 69.2% |
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.58 | 42.0 | 3.48e-01 | 78.9% | 91.2% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.58 | 42.0 | 4.18e-01 | 77.5% | 85.3% |
| 2pmzB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.57 | 48.0 | 4.06e-01 | 94.4% | 95.2% |
| 1d5aA01 | 3.30.342.10 | Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 | 0.57 | 45.0 | 3.56e-01 | 94.4% | 40.4% |
| 2ey4D00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.57 | 41.0 | 4.12e-01 | 94.4% | 73.3% |
| 2lqkA00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 38.0 | 3.85e-01 | 71.8% | 87.1% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.55 | 39.0 | 2.96e-01 | 76.1% | 91.0% |
| 6ruiB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.55 | 46.0 | 3.85e-01 | 94.4% | 96.0% |
| 3cloC01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 43.0 | 3.22e-01 | 88.7% | 69.4% |
| 1df0A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 39.0 | 3.65e-01 | 77.5% | 76.1% |
| 1xe1A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 45.0 | 4.13e-01 | 94.4% | 79.1% |
| 2wssA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.53 | 46.0 | 4.20e-01 | 97.2% | 92.5% |
| 3mmhA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.52 | 42.0 | 3.30e-01 | 93.0% | 71.3% |
| 1vs3A02 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.52 | 42.0 | 3.49e-01 | 95.8% | 63.9% |
| 1ut9A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.58e-01 | 94.4% | 61.2% |
| 4j37A02 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.52 | 42.0 | 3.24e-01 | 97.2% | 51.1% |
| 1vloA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.52 | 37.0 | 3.50e-01 | 94.4% | 61.5% |
| 4mmnA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 42.0 | 3.40e-01 | 91.5% | 72.3% |
| 6we5A00 | 3.90.80.10 | Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase | 0.51 | 35.0 | 2.63e-01 | 73.2% | 62.6% |
| 3lvtA03 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 42.0 | 3.53e-01 | 93.0% | 63.6% |
| 4uhvA01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.51 | 37.0 | 2.80e-01 | 87.3% | 29.2% |
| 1lmiA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 36.0 | 3.08e-01 | 77.5% | 50.4% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.51 | 41.0 | 3.82e-01 | 88.7% | 73.3% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.51 | 32.0 | 3.51e-01 | 84.5% | 80.4% |
| 3ci6B00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.50 | 40.0 | 3.16e-01 | 91.5% | 72.7% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4993732 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.97 | 87.0 | 6.94e-01 | 93.0% | 91.2% |
| 5035476 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.97 | 89.0 | 6.55e-01 | 95.8% | 95.0% |
| 4946209 | 69.1.1.18 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › DNA_topoisoIV | 0.96 | 85.0 | 5.81e-01 | 91.5% | 96.1% |
| 4994372 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.95 | 83.0 | 6.69e-01 | 90.1% | 95.0% |
| 4941327 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.94 | 85.0 | 6.47e-01 | 94.4% | 100.0% |
| 3963364 | 69.1.1.3 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT | 0.93 | 82.0 | 6.25e-01 | 93.0% | 88.3% |
| 4457379 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.92 | 81.0 | 6.21e-01 | 93.0% | 88.3% |
| 3602706 | 69.1.1.3 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT | 0.92 | 85.0 | 6.58e-01 | 97.2% | 94.2% |
| 4934481 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.92 | 80.0 | 6.05e-01 | 91.5% | 95.9% |
| 4180552 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.92 | 79.0 | 5.84e-01 | 91.5% | 93.9% |
| 2701967 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.92 | 81.0 | 6.28e-01 | 93.0% | 94.2% |
| 4274856 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.90 | 83.0 | 6.08e-01 | 97.2% | 95.8% |
| 4680886 | 69.1.1.14 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint_2 | 0.90 | 80.0 | 5.87e-01 | 94.4% | 95.2% |
| 3174953 | 69.1.1.2 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint | 0.90 | 77.0 | 5.21e-01 | 91.5% | 96.5% |
| 2553113 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 80.0 | 6.42e-01 | 95.8% | 93.8% |
| 5030847 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 81.0 | 6.05e-01 | 97.2% | 90.6% |
| 4997597 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 81.0 | 6.15e-01 | 97.2% | 94.7% |
| 5065932 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 76.0 | 5.95e-01 | 91.5% | 90.0% |
| 3934143 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.89 | 76.0 | 5.93e-01 | 91.5% | 94.3% |
| 5035795 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.88 | 79.0 | 6.11e-01 | 95.8% | 92.4% |
| 2675767 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.88 | 78.0 | 5.91e-01 | 94.4% | 89.6% |
| 259963 | 69.1.1.3 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT | 0.88 | 79.0 | 6.17e-01 | 95.8% | 92.8% |
| 4992473 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.88 | 82.0 | 6.01e-01 | 100.0% | 91.8% |
| 2546507 | 69.1.1.2 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint | 0.86 | 73.0 | 5.72e-01 | 91.5% | 93.7% |
| 5013937 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.86 | 79.0 | 5.84e-01 | 98.6% | 95.8% |
| 4045174 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 78.0 | 5.76e-01 | 97.2% | 91.5% |
| 2636473 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 76.0 | 5.87e-01 | 95.8% | 92.4% |
| 4950409 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 78.0 | 5.89e-01 | 98.6% | 90.3% |
| 4997601 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 70.0 | 5.51e-01 | 88.7% | 94.3% |
| 4500960 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 71.0 | 5.50e-01 | 90.1% | 91.7% |
| 4930925 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 75.0 | 5.89e-01 | 97.2% | 93.6% |
| 3603108 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.82 | 72.0 | 5.63e-01 | 95.8% | 93.1% |
| 4932851 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.81 | 72.0 | 5.70e-01 | 95.8% | 93.3% |
| 3603738 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.80 | 71.0 | 5.56e-01 | 95.8% | 95.7% |
| 5037092 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.79 | 68.0 | 6.91e-01 | 94.4% | 94.3% |
| 1844125 | 1.1.13.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CoV_NSP9 | 0.66 | 49.0 | 4.24e-01 | 78.9% | 74.8% |
| 4937158 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 44.0 | 4.77e-01 | 85.9% | 88.3% |
| 5000301 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.63 | 51.0 | 4.33e-01 | 88.7% | 95.7% |
| 4407090 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.61 | 52.0 | 4.14e-01 | 94.4% | 57.2% |
| 5022644 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 44.0 | 4.03e-01 | 94.4% | 58.9% |
| 3485387 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 40.0 | 3.96e-01 | 70.4% | 92.0% |
| 4165723 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.59 | 40.0 | 4.16e-01 | 83.1% | 76.9% |
| 3590784 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.59 | 42.0 | 4.35e-01 | 85.9% | 81.5% |
| 4958890 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.58 | 46.0 | 4.49e-01 | 94.4% | 77.5% |
| 3817267 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.58 | 45.0 | 4.10e-01 | 83.1% | 77.9% |
| 5034906 | 205.1.1.16 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 | 0.58 | 53.0 | 4.06e-01 | 100.0% | 54.9% |
| 4611708 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.58 | 40.0 | 4.27e-01 | 85.9% | 85.0% |
| 1112010 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.58 | 42.0 | 4.18e-01 | 77.5% | 85.3% |
| 4030357 | 1.1.7.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AARP2CN | 0.57 | 48.0 | 4.48e-01 | 94.4% | 82.2% |
| 3964846 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.57 | 41.0 | 3.87e-01 | 85.9% | 63.5% |
| 4012945 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 40.0 | 3.93e-01 | 73.2% | 92.0% |
| 4282509 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 44.0 | 2.64e-01 | 94.4% | 11.0% |
| 4662947 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.56 | 39.0 | 4.10e-01 | 85.9% | 80.0% |
| 3708407 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.55 | 43.0 | 4.03e-01 | 83.1% | 96.5% |
| 4966854 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 45.0 | 2.93e-01 | 94.4% | 19.2% |
| 3059161 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.55 | 43.0 | 4.13e-01 | 85.9% | 78.0% |
| 3598222 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 40.0 | 4.04e-01 | 77.5% | 78.6% |
| 4987232 | 304.102.1.2 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD | 0.54 | 45.0 | 3.42e-01 | 97.2% | 92.4% |
| 3821751 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.53 | 37.0 | 3.62e-01 | 74.6% | 75.0% |
| 3501379 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.53 | 40.0 | 2.74e-01 | 81.7% | 84.4% |
| 3823190 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.53 | 45.0 | 3.45e-01 | 93.0% | 58.7% |
| 4449102 | 1.1.7.70 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_GLAA-B_II | 0.53 | 44.0 | 4.11e-01 | 94.4% | 91.1% |
| 4335575 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 36.0 | 2.04e-01 | 93.0% | 5.5% |
| 3652079 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.52 | 40.0 | 3.45e-01 | 84.5% | 61.7% |
| 3951961 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.52 | 36.0 | 3.32e-01 | 94.4% | 54.7% |
| 3939777 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.51 | 43.0 | 3.66e-01 | 97.2% | 66.9% |
| 3730035 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.51 | 43.0 | 3.96e-01 | 100.0% | 86.0% |
| 3934130 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.51 | 43.0 | 3.63e-01 | 98.6% | 64.6% |
| 3512351 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.51 | 38.0 | 3.56e-01 | 84.5% | 73.7% |
| 3925981 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.50 | 43.0 | 3.82e-01 | 98.6% | 72.7% |
| 5075764 | 4011.1.1.0 ↗ | beta barrels › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins | 0.50 | 38.0 | 3.82e-01 | 91.5% | 80.0% |
| 3941125 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.50 | 43.0 | 3.50e-01 | 98.6% | 60.0% |
D8
medium
residues 821-880_1059-1078
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jmzA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.79 | 56.0 | 4.31e-01 | 100.0% | 35.1% |
| 4e2tB00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.78 | 60.0 | 4.59e-01 | 100.0% | 38.5% |
| 4o1sA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.77 | 57.0 | 4.35e-01 | 100.0% | 35.9% |
| 1dq3A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.75 | 58.0 | 4.40e-01 | 100.0% | 36.7% |
| 1at0A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.75 | 56.0 | 4.54e-01 | 100.0% | 43.4% |
| 5o9iA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.72 | 56.0 | 4.29e-01 | 100.0% | 38.0% |
| 1am2A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.69 | 64.0 | 4.82e-01 | 100.0% | 52.5% |
| 6zgqA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.63 | 48.0 | 3.97e-01 | 100.0% | 44.9% |
| 2lcjA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.59 | 53.0 | 4.03e-01 | 100.0% | 43.2% |
| 3mb5A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.54 | 35.0 | 3.92e-01 | 100.0% | 87.1% |
| 1k1yB02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 39.0 | 2.84e-01 | 80.0% | 86.5% |
| 4jp0A01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 39.0 | 3.24e-01 | 80.0% | 51.4% |
| 5eqjB01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.50 | 33.0 | 3.51e-01 | 100.0% | 77.5% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4941327 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 75.0 | 6.05e-01 | 100.0% | 52.4% |
| 5023539 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 56.0 | 4.40e-01 | 100.0% | 35.5% |
| 5052154 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 58.0 | 4.47e-01 | 100.0% | 35.2% |
| 4978263 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 59.0 | 4.52e-01 | 100.0% | 35.8% |
| 4993808 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 58.0 | 4.62e-01 | 100.0% | 40.0% |
| 4932851 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.81 | 54.0 | 4.41e-01 | 100.0% | 40.0% |
| 4993813 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.81 | 58.0 | 4.49e-01 | 100.0% | 36.9% |
| 5029355 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.81 | 61.0 | 4.86e-01 | 100.0% | 42.0% |
| 5022295 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.81 | 57.0 | 4.36e-01 | 100.0% | 35.2% |
| 4982797 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.81 | 57.0 | 4.62e-01 | 100.0% | 40.7% |
| 3949431 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.79 | 61.0 | 4.88e-01 | 100.0% | 43.3% |
| 4999902 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.78 | 58.0 | 4.74e-01 | 100.0% | 43.4% |
| 4984220 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.78 | 55.0 | 4.37e-01 | 100.0% | 38.1% |
| 5066163 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.77 | 59.0 | 4.81e-01 | 100.0% | 46.4% |
| 3518586 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.76 | 57.0 | 4.18e-01 | 100.0% | 31.2% |
| 4070999 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.75 | 56.0 | 4.46e-01 | 100.0% | 40.6% |
| 3517362 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.75 | 55.0 | 4.50e-01 | 100.0% | 43.1% |
| 4487998 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.75 | 56.0 | 4.28e-01 | 100.0% | 36.0% |
| 4600944 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.75 | 56.0 | 4.28e-01 | 100.0% | 36.0% |
| 3934143 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.75 | 55.0 | 4.53e-01 | 100.0% | 44.3% |
| 5031914 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.74 | 61.0 | 4.57e-01 | 100.0% | 37.8% |
| 3877825 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.70 | 57.0 | 4.11e-01 | 100.0% | 32.9% |
| 4084747 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.70 | 64.0 | 4.19e-01 | 100.0% | 73.4% |
| 4544734 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.69 | 63.0 | 4.59e-01 | 100.0% | 59.5% |
| 3495262 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.69 | 52.0 | 3.94e-01 | 100.0% | 35.6% |
| 3215378 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.68 | 56.0 | 4.49e-01 | 100.0% | 47.3% |
| 3511246 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.68 | 54.0 | 4.24e-01 | 100.0% | 41.8% |
| 3230518 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.67 | 54.0 | 4.39e-01 | 100.0% | 45.8% |
| 4998392 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.66 | 61.0 | 4.71e-01 | 100.0% | 50.3% |
| 4975503 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.66 | 59.0 | 4.47e-01 | 100.0% | 43.3% |
| 4971412 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.62 | 54.0 | 4.04e-01 | 100.0% | 41.1% |
D9
medium
residues 881-989
Domain cluster:
rep: OR354820.1__WNM50410.1__Alsa1_CDS0060__00060__D21-160
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7qssA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.80 | 74.0 | 6.06e-01 | 99.1% | 69.1% |
| 2cw8A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.79 | 72.0 | 6.11e-01 | 96.3% | 66.3% |
| 2dchX01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.77 | 53.0 | 5.71e-01 | 70.6% | 88.2% |
| 5a72A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.72 | 49.0 | 4.35e-01 | 70.6% | 84.7% |
| 1af5A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.66 | 48.0 | 4.57e-01 | 76.1% | 76.2% |
| 4yhxA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.65 | 46.0 | 4.23e-01 | 73.4% | 69.5% |
| 1whvA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 36.0 | 3.73e-01 | 78.0% | 63.0% |
| 2kdoA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 33.0 | 3.76e-01 | 76.1% | 76.2% |
| 8be0A01 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.57 | 39.0 | 3.30e-01 | 70.6% | 93.7% |
| 2djwA01 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.57 | 34.0 | 3.97e-01 | 76.1% | 86.5% |
| 4r5zA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 37.0 | 3.57e-01 | 89.0% | 56.3% |
| 1uu1B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 37.0 | 3.48e-01 | 84.4% | 53.4% |
| 1wexA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 35.0 | 4.08e-01 | 76.1% | 91.8% |
| 1eayD00 | 3.30.70.400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CheY-binding domain of CheA | 0.57 | 32.0 | 3.80e-01 | 74.3% | 85.5% |
| 2phcB01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.56 | 39.0 | 4.33e-01 | 83.5% | 94.0% |
| 3pqkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 39.0 | 4.12e-01 | 74.3% | 91.9% |
| 3tzyA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.56 | 29.0 | 3.51e-01 | 76.1% | 77.1% |
| 1b4bA00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.55 | 35.0 | 4.16e-01 | 85.3% | 98.6% |
| 3dgpB00 | 3.30.70.1220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TFB5-like | 0.55 | 30.0 | 3.69e-01 | 78.9% | 88.9% |
| 1svvB02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 40.0 | 4.27e-01 | 97.2% | 92.4% |
| 2cpjA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 34.0 | 3.53e-01 | 78.0% | 67.7% |
| 2g0cA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 32.0 | 3.80e-01 | 75.2% | 92.6% |
| 2cqhA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 33.0 | 3.56e-01 | 78.0% | 73.1% |
| 2cpdA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 33.0 | 3.76e-01 | 78.0% | 89.3% |
| 3lfkD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 3.88e-01 | 84.4% | 76.4% |
| 4mo0A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.53 | 35.0 | 3.91e-01 | 84.4% | 92.4% |
| 2uv8A06 | 3.30.70.2490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 30.0 | 3.56e-01 | 84.4% | 88.1% |
| 4erdA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 34.0 | 3.47e-01 | 78.0% | 66.7% |
| 6uvuA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 38.0 | 3.90e-01 | 80.7% | 81.7% |
| 1g6sA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.51 | 43.0 | 3.56e-01 | 94.5% | 94.6% |
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 35.0 | 3.74e-01 | 79.8% | 83.9% |
| 1u5tA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 32.0 | 3.81e-01 | 75.2% | 98.6% |
| 2v1nA01 | 1.10.10.2030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain | 0.50 | 36.0 | 3.79e-01 | 76.1% | 90.1% |
| 2fbhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 39.0 | 3.64e-01 | 83.5% | 67.2% |
| 2gqqA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.50 | 33.0 | 3.60e-01 | 96.3% | 84.7% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4993734 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.83 | 77.0 | 6.01e-01 | 100.0% | 53.2% |
| 4979525 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.82 | 76.0 | 6.10e-01 | 98.2% | 59.5% |
| 4996524 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.81 | 75.0 | 6.05e-01 | 98.2% | 60.0% |
| 4977674 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.81 | 74.0 | 5.72e-01 | 97.2% | 52.7% |
| 4993129 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.81 | 74.0 | 7.05e-01 | 98.2% | 96.8% |
| 5013983 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.77 | 57.0 | 5.56e-01 | 77.1% | 100.0% |
| 5012700 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.74 | 53.0 | 5.88e-01 | 73.4% | 95.3% |
| 3282307 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.73 | 52.0 | 5.56e-01 | 74.3% | 100.0% |
| 4950410 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.72 | 50.0 | 5.74e-01 | 71.6% | 100.0% |
| 3955112 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.72 | 52.0 | 5.68e-01 | 75.2% | 100.0% |
| 4222799 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.71 | 49.0 | 4.35e-01 | 70.6% | 85.8% |
| 4467389 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.70 | 51.0 | 5.13e-01 | 75.2% | 99.1% |
| 4580140 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.69 | 45.0 | 5.02e-01 | 84.4% | 84.7% |
| 3205225 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.68 | 50.0 | 5.02e-01 | 76.1% | 98.2% |
| 4377946 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.68 | 51.0 | 4.84e-01 | 78.9% | 84.6% |
| 3251998 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.64 | 50.0 | 5.13e-01 | 83.5% | 100.0% |
| 4039150 | 306.1.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Glucose permease domain IIB › Glucose permease domain IIB › PTS_EIIB | 0.63 | 45.0 | 4.80e-01 | 74.3% | 94.7% |
| 4937614 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.63 | 53.0 | 4.86e-01 | 99.1% | 69.0% |
| 3723051 | 304.3.1.10 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA_PCA1 | 0.63 | 33.0 | 4.02e-01 | 76.1% | 78.6% |
| 5068166 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.63 | 50.0 | 4.46e-01 | 87.2% | 60.0% |
| 4651140 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.62 | 44.0 | 4.30e-01 | 73.4% | 74.2% |
| 4998929 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.61 | 41.0 | 4.55e-01 | 73.4% | 92.5% |
| 4489801 | 306.1.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › Glucose permease domain IIB › Glucose permease domain IIB | 0.60 | 40.0 | 4.65e-01 | 73.4% | 100.0% |
| 4185571 | 306.1.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › Glucose permease domain IIB › Glucose permease domain IIB | 0.60 | 38.0 | 4.50e-01 | 70.6% | 100.0% |
| 4008135 | 306.1.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Glucose permease domain IIB › Glucose permease domain IIB › PTS_EIIB | 0.59 | 42.0 | 4.52e-01 | 73.4% | 91.1% |
| 4604805 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.59 | 32.0 | 3.88e-01 | 76.1% | 86.2% |
| 5063534 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.58 | 47.0 | 4.56e-01 | 88.1% | 77.6% |
| 4032926 | 306.1.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › Glucose permease domain IIB › Glucose permease domain IIB | 0.58 | 42.0 | 4.67e-01 | 93.6% | 98.8% |
| 5051914 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.58 | 33.0 | 3.91e-01 | 77.1% | 85.7% |
| 4945605 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.58 | 33.0 | 3.99e-01 | 78.0% | 92.3% |
| 3839289 | 304.54.1.0 ↗ | a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like | 0.57 | 37.0 | 4.19e-01 | 86.2% | 88.7% |
| 4309233 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.57 | 37.0 | 4.29e-01 | 87.2% | 94.7% |
| 5064038 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.57 | 38.0 | 4.21e-01 | 87.2% | 88.0% |
| 1114523 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.57 | 37.0 | 4.02e-01 | 87.2% | 82.6% |
| 5001456 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.56 | 34.0 | 4.00e-01 | 78.0% | 91.4% |
| 3726343 | 304.3.1.10 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA_PCA1 | 0.56 | 31.0 | 3.66e-01 | 76.1% | 84.6% |
| 3813612 | 242.2.1.2 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like › tRNA_int_endo_N | 0.56 | 39.0 | 3.95e-01 | 73.4% | 76.4% |
| 4317654 | 310.1.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain | 0.55 | 40.0 | 3.83e-01 | 75.2% | 94.4% |
| 3743770 | 304.9.1.31 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_9 | 0.55 | 33.0 | 3.62e-01 | 77.1% | 74.1% |
| 4970578 | 304.11.1.16 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › DUF2110_C | 0.54 | 34.0 | 3.70e-01 | 78.9% | 75.6% |
| 3785450 | 304.9.1.103 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF26763 | 0.54 | 32.0 | 3.48e-01 | 77.1% | 70.0% |
| 4929591 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.54 | 36.0 | 3.88e-01 | 85.3% | 82.0% |
| 3253760 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.53 | 32.0 | 3.54e-01 | 77.1% | 75.3% |
| 4992190 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.53 | 30.0 | 3.53e-01 | 75.2% | 84.3% |
| 3639719 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.53 | 35.0 | 3.94e-01 | 87.2% | 91.3% |
| 5038163 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 40.0 | 3.49e-01 | 85.3% | 63.2% |
| 3255461 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.51 | 33.0 | 3.59e-01 | 78.0% | 81.2% |
| 3506323 | 12.1.1.98 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Helicase_C_3 | 0.51 | 35.0 | 3.49e-01 | 84.4% | 67.8% |