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NC_031274.1__YP_009304490.1__BJD45_gp11__00011

Bact-Vir

NC_031274.1__YP_009304490.1__BJD45_gp11__00011

Identity

Accession:
NC_031274 ↗
Kingdom:
phage

Quality

84.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-36
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2px0A01 1.20.120.1380 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar FlhF biosynthesis protein, N domain 0.75 61.0 4.80e-01 100.0% 43.8%
2qorA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 60.0 4.08e-01 100.0% 25.4%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.71 51.0 3.17e-01 100.0% 14.3%
3b0xA01 1.10.150.110 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like 0.68 53.0 3.99e-01 87.9% 33.3%
3waeA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.67 56.0 3.60e-01 97.0% 22.0%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4444927 3877.1.1.1 alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP 0.76 64.0 3.90e-01 100.0% 14.8%
3451236 397.4.1.3 few secondary structure elements › Toxic hairpin › VhTI-like › VhTI-like › PF31266 0.73 62.0 5.64e-01 100.0% 75.6%
4585118 3877.1.1.1 alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP 0.71 59.0 3.58e-01 97.0% 14.3%