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NC_031900.1__YP_009320592.1__BOQ05_gp105__00159

Bact-Vir

NC_031900.1__YP_009320592.1__BOQ05_gp105__00159

Identity

Accession:
NC_031900 ↗
Kingdom:
phage

Quality

89.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Potamoivirus› Synechococcus_phage_S-CAM4

TaxID: 1883367

Cluster

View cluster (51 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-84
PDB
Domain cluster: rep: KP211958.1__AJK27601.1__PTIM40_174__00174__D3-71
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20198.4 best DUF6561 51.8 9.20e-14 100.0% 89.3%
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.90 81.0 8.32e-01 98.7% 97.4%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 51.0 5.44e-01 87.3% 85.3%
3jb9H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 50.0 5.17e-01 84.8% 77.6%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 45.0 5.16e-01 87.3% 92.7%
4c92A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 56.0 4.72e-01 93.7% 54.6%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 46.0 5.18e-01 83.5% 95.0%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 46.0 4.79e-01 84.8% 80.3%
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 4.56e-01 86.1% 70.7%
4dovA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.64 56.0 4.54e-01 100.0% 75.8%
1jb0E00 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.64 48.0 5.09e-01 83.5% 92.8%
6vilA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.62 55.0 4.50e-01 100.0% 71.7%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 39.0 4.16e-01 86.1% 76.5%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 40.0 4.42e-01 86.1% 88.7%
5wb2B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 39.0 4.02e-01 86.1% 75.3%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 37.0 4.02e-01 81.0% 79.1%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 39.0 4.34e-01 84.8% 92.1%
7k9cA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 45.0 4.43e-01 100.0% 82.6%
3djmA00 2.170.150.40 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Domain of unknown function (DUF427) 0.53 40.0 3.60e-01 82.3% 90.2%
1s68A02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.53 36.0 3.28e-01 72.2% 94.7%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 39.0 4.16e-01 82.3% 92.5%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 34.0 3.62e-01 87.3% 81.8%
1i5pA03 2.100.10.10 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain 0.50 35.0 2.70e-01 74.7% 51.0%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.50 41.0 3.24e-01 91.1% 41.6%
4qclA01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.50 40.0 3.98e-01 89.9% 100.0%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4813032 4.1.1.328 ↗ beta barrels › SH3 › SH3 › SH3 › Sm_like 0.89 79.0 7.97e-01 100.0% 93.7%
5075579 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 55.0 5.54e-01 88.6% 75.0%
5000810 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.72 50.0 4.93e-01 84.8% 67.1%
4015537 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 50.0 5.09e-01 86.1% 74.4%
4993070 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.98e-01 91.1% 92.0%
3592995 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 55.0 5.43e-01 87.3% 82.4%
4029154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 54.0 4.67e-01 92.4% 56.3%
4876565 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.67 46.0 4.46e-01 84.8% 63.3%
1175040 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.67 46.0 5.18e-01 83.5% 95.0%
3699819 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.66 54.0 5.04e-01 87.3% 73.7%
3592930 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 46.0 4.38e-01 86.1% 61.1%
4029204 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.66 46.0 4.50e-01 84.8% 67.1%
3890091 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.65 45.0 4.56e-01 84.8% 71.2%
3710540 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.65 49.0 5.03e-01 84.8% 84.0%
3715818 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.65 46.0 4.33e-01 86.1% 61.1%
3598657 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 46.0 4.24e-01 84.8% 58.0%
3703320 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.64 50.0 5.04e-01 87.3% 83.5%
3396989 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.64 46.0 4.24e-01 87.3% 59.0%
3786067 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.64 49.0 4.94e-01 87.3% 81.2%
3506156 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.63 45.0 4.64e-01 87.3% 78.7%
3915752 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.63 48.0 4.64e-01 87.3% 72.2%
3564972 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 41.0 4.29e-01 82.3% 74.3%
3381251 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 37.0 3.78e-01 87.3% 58.7%
3614413 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.62 54.0 4.61e-01 96.2% 85.6%
3645842 4.1.1.162 ↗ beta barrels › SH3 › SH3 › SH3 › DUF502 0.58 46.0 4.61e-01 91.1% 85.0%
3505711 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.58 38.0 3.74e-01 83.5% 62.4%
3723122 5.1.2.19 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF4185 0.57 48.0 3.19e-01 93.7% 91.9%
3177469 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 42.0 4.40e-01 88.6% 88.6%
5062120 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 46.0 4.21e-01 87.3% 66.7%
3495652 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 43.0 3.44e-01 96.2% 40.0%
3483566 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 46.0 4.24e-01 100.0% 84.8%
3482559 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 40.0 3.29e-01 88.6% 91.2%
162115 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.52 36.0 3.83e-01 84.8% 85.3%
3878271 101.1.2.284 ↗ alpha arrays › HTH › HTH › winged helix domain › WAC_Acf1_DNA_bd 0.51 34.0 2.80e-01 81.0% 34.8%
3797626 74.1.1.0 ↗ beta duplicates or obligate multimers › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain 0.51 32.0 3.56e-01 72.2% 90.7%
3964215 897.2.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Protein E › Protein E › Adhesin_E 0.50 37.0 3.36e-01 81.0% 65.2%
3627817 220.1.1.47 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.50 38.0 2.63e-01 83.5% 29.8%