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NC_031906.1__YP_009321341.1__BOW87_gp180__00078

Bact-Vir

Identity

Accession:: NC_031906 ↗
Kingdom:: phage

Quality

84.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Charybdisvirus› Synechococcus_phage_S-CAM3

TaxID: 1883366

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-41

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1fxkB00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.74	53.0	3.87e-01	75.6%	30.3%
1amuA01	3.40.50.980	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.73	53.0	3.50e-01	78.0%	19.4%
1r7jA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.71	48.0	3.73e-01	95.1%	32.2%
3vvmA02	1.10.1740.110	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A ›	0.66	51.0	3.79e-01	82.9%	33.3%
3grlA00	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.64	46.0	2.59e-01	82.9%	6.0%
5i41B00	1.10.1660.10	Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 ›	0.62	42.0	3.60e-01	70.7%	85.1%
2eyqA07	3.90.1150.50	Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain	0.59	44.0	3.01e-01	80.5%	61.2%
8d3mA02	1.20.120.920	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain	0.59	46.0	3.01e-01	100.0%	18.3%
2wshA00	3.40.1440.40	Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease ›	0.58	41.0	2.91e-01	78.0%	29.9%
2ctdA00	3.30.160.60	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger	0.54	37.0	3.03e-01	80.5%	32.3%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3916813	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.84	41.0	3.69e-01	73.2%	36.4%
3279985	323.1.1.3 ↗	a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding	0.72	52.0	3.51e-01	78.0%	22.0%
3315793	323.1.1.3 ↗	a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding	0.71	52.0	3.47e-01	80.5%	20.6%
4547448	323.1.1.3 ↗	a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding	0.70	52.0	3.53e-01	80.5%	23.4%
5004893	2004.1.1.293 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15	0.65	45.0	2.62e-01	73.2%	8.1%
3787939	5081.1.1.4 ↗	alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751	0.57	40.0	2.60e-01	82.9%	13.9%
3268551	5054.1.1.71 ↗	alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › PTPLA	0.54	47.0	2.95e-01	100.0%	56.7%
3174660	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.53	37.0	2.99e-01	75.6%	41.1%
3802509	7015.1.1.0 ↗	alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain	0.52	44.0	3.06e-01	100.0%	68.7%