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NC_031922.1__YP_009322588.1__BOW85_gp096__00153
Bact-VirNC_031922.1__YP_009322588.1__BOW85_gp096__00153
Identity
- Accession:
- NC_031922 ↗
- Kingdom:
- phage
Quality
58.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Kanaloavirus›
Synechococcus_phage_S-CAM9
TaxID: 1883369
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 326-398
Domain cluster:
rep: GU075905.1__ADO99942.1__PHM2_164__00164__D192-260
D2
high
residues 650-707
Domain cluster:
representative
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1o9aA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.79 | 55.0 | 6.14e-01 | 81.0% | 95.5% |
| 1e88A03 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.78 | 54.0 | 6.01e-01 | 82.8% | 100.0% |
| 1v5vA01 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.75 | 53.0 | 3.79e-01 | 74.1% | 29.9% |
| 2cg7A01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.74 | 53.0 | 5.76e-01 | 79.3% | 95.7% |
| 4paaA03 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.72 | 51.0 | 3.54e-01 | 74.1% | 27.0% |
| 1x31C01 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.72 | 50.0 | 4.17e-01 | 74.1% | 45.7% |
| 3gceA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.69 | 52.0 | 4.28e-01 | 81.0% | 48.1% |
| 3frnA03 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 47.0 | 4.93e-01 | 75.9% | 100.0% |
| 3prbA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.65 | 43.0 | 4.76e-01 | 74.1% | 90.9% |
| 2qpzA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.63 | 47.0 | 3.94e-01 | 81.0% | 48.5% |
| 2azpA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.63 | 43.0 | 3.14e-01 | 70.7% | 78.3% |
| 3md7A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.63 | 44.0 | 2.86e-01 | 72.4% | 45.2% |
| 1dm9A00 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.62 | 46.0 | 3.92e-01 | 82.8% | 83.7% |
| 3holA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 45.0 | 4.00e-01 | 81.0% | 64.0% |
| 5jk0B01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.61 | 41.0 | 3.00e-01 | 70.7% | 27.2% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.61 | 42.0 | 4.06e-01 | 74.1% | 67.6% |
| 6klsA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.61 | 43.0 | 3.70e-01 | 74.1% | 56.4% |
| 3nffH00 | 6.20.250.70 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.60 | 44.0 | 3.54e-01 | 77.6% | 76.6% |
| 2e4qA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.60 | 44.0 | 3.67e-01 | 81.0% | 46.3% |
| 2zylA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.59 | 45.0 | 3.43e-01 | 81.0% | 36.3% |
| 7szeB01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.59 | 44.0 | 3.68e-01 | 81.0% | 47.7% |
| 7q04F01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.59 | 43.0 | 3.63e-01 | 81.0% | 47.7% |
| 3gkeA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.59 | 45.0 | 3.48e-01 | 81.0% | 36.9% |
| 5khaB01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.58 | 50.0 | 3.32e-01 | 100.0% | 68.8% |
| 2q07A03 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.58 | 41.0 | 3.98e-01 | 75.9% | 77.3% |
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.58 | 41.0 | 3.35e-01 | 75.9% | 63.3% |
| 7ylsB01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.57 | 42.0 | 3.59e-01 | 82.8% | 48.1% |
| 2b1xA02 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.57 | 43.0 | 3.43e-01 | 82.8% | 41.3% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 39.0 | 3.29e-01 | 72.4% | 68.3% |
| 3c8cB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 42.0 | 3.43e-01 | 84.5% | 51.2% |
| 7bysA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 46.0 | 3.05e-01 | 100.0% | 47.8% |
| 1jnrB02 | 6.20.260.10 | Special › Other non-globular › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Adenylylsulphate reductase, beta subunit, C-terminal domain | 0.57 | 33.0 | 2.98e-01 | 84.5% | 39.8% |
| 3vcaA02 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.55 | 40.0 | 3.33e-01 | 82.8% | 45.4% |
| 6j7xC01 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.55 | 40.0 | 3.13e-01 | 81.0% | 53.6% |
| 2bw8A00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.54 | 38.0 | 2.55e-01 | 74.1% | 21.2% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 45.0 | 3.91e-01 | 94.8% | 81.5% |
| 6z46V01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.54 | 46.0 | 3.32e-01 | 100.0% | 74.2% |
| 3deeA02 | 3.90.930.50 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.53 | 38.0 | 3.16e-01 | 79.3% | 61.4% |
| 1rieA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.53 | 39.0 | 3.12e-01 | 81.0% | 66.9% |
| 2jraA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.53 | 32.0 | 3.57e-01 | 74.1% | 83.3% |
| 4ok4A02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 39.0 | 2.48e-01 | 84.5% | 36.6% |
| 2h7fX02 | 3.90.15.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 | 0.52 | 42.0 | 2.85e-01 | 100.0% | 22.8% |
| 1h8mA00 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.52 | 38.0 | 3.02e-01 | 82.8% | 55.0% |
| 6hoxA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 39.0 | 2.69e-01 | 84.5% | 49.1% |
| 2j3tC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 38.0 | 2.96e-01 | 82.8% | 57.4% |
| 4xpmB00 | 3.40.1840.10 | Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like | 0.51 | 37.0 | 3.62e-01 | 82.8% | 86.6% |
| 1aisA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.50 | 35.0 | 3.23e-01 | 81.0% | 52.9% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.50 | 35.0 | 3.20e-01 | 75.9% | 63.1% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3886839 | 391.1.1.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › fn1 | 0.80 | 53.0 | 6.11e-01 | 79.3% | 100.0% |
| 3883146 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.75 | 55.0 | 5.99e-01 | 89.7% | 100.0% |
| 3476979 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.72 | 55.0 | 4.54e-01 | 94.8% | 46.6% |
| 3480221 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.71 | 54.0 | 5.23e-01 | 94.8% | 73.8% |
| 3550232 | 389.1.1.1 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF | 0.69 | 61.0 | 5.37e-01 | 98.3% | 90.6% |
| 5019949 | 4294.1.1.1 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske | 0.69 | 50.0 | 4.26e-01 | 77.6% | 48.4% |
| 3424562 | 304.107.1.8 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › AAA_assoc | 0.68 | 46.0 | 3.66e-01 | 72.4% | 60.0% |
| 4950268 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.66 | 45.0 | 4.50e-01 | 70.7% | 76.7% |
| 3684518 | 304.107.1.0 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain | 0.66 | 46.0 | 3.73e-01 | 74.1% | 72.2% |
| 3965912 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.66 | 50.0 | 4.28e-01 | 82.8% | 75.8% |
| 4944404 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.64 | 48.0 | 3.79e-01 | 84.5% | 36.9% |
| 5011958 | 4294.1.1.1 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske | 0.64 | 48.0 | 4.05e-01 | 81.0% | 49.0% |
| 3336598 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.64 | 52.0 | 3.36e-01 | 89.7% | 23.8% |
| 4031542 | 66.1.1.2 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske_2 | 0.64 | 48.0 | 4.02e-01 | 81.0% | 49.5% |
| 4487967 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.64 | 48.0 | 4.02e-01 | 81.0% | 51.0% |
| 5065208 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 44.0 | 4.53e-01 | 74.1% | 100.0% |
| 3692635 | 66.1.1.0 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain | 0.63 | 43.0 | 3.93e-01 | 70.7% | 51.2% |
| 2388345 | 3363.1.1.3 ↗ | beta sandwiches › avirulence protein AvrPiz-t homologs › avirulence protein AvrPiz-t homologs › avirulence protein AvrPiz-t homologs › AVR-Pik_HID | 0.63 | 46.0 | 3.94e-01 | 77.6% | 51.6% |
| 3513418 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.63 | 44.0 | 4.82e-01 | 74.1% | 100.0% |
| 3225197 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.62 | 45.0 | 2.95e-01 | 81.0% | 17.0% |
| 5071089 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 45.0 | 4.74e-01 | 77.6% | 100.0% |
| 4943690 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 45.0 | 3.50e-01 | 82.8% | 52.4% |
| 4641279 | 4294.1.1.1 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske | 0.60 | 45.0 | 3.60e-01 | 81.0% | 41.7% |
| 3783252 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 40.0 | 2.48e-01 | 70.7% | 90.4% |
| 5010004 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.60 | 42.0 | 3.49e-01 | 75.9% | 44.5% |
| 3492308 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.59 | 46.0 | 2.82e-01 | 86.2% | 90.8% |
| 5041236 | 375.13.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt | 0.59 | 44.0 | 4.51e-01 | 81.0% | 83.6% |
| 3227147 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.59 | 41.0 | 2.61e-01 | 75.9% | 19.7% |
| 3968312 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.58 | 43.0 | 3.57e-01 | 81.0% | 47.2% |
| 3590871 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.57 | 44.0 | 2.87e-01 | 93.1% | 18.8% |
| 3928729 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.57 | 44.0 | 3.06e-01 | 86.2% | 46.9% |
| 5074455 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 42.0 | 3.54e-01 | 82.8% | 62.7% |
| 5041234 | 375.13.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt | 0.56 | 41.0 | 4.06e-01 | 77.6% | 75.0% |
| 3832069 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.56 | 38.0 | 3.69e-01 | 70.7% | 78.5% |
| 3937472 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.56 | 42.0 | 3.55e-01 | 82.8% | 57.1% |
| 3700076 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.55 | 37.0 | 2.24e-01 | 72.4% | 9.1% |
| 3993494 | 5.1.5.42 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › RMC1_N | 0.54 | 45.0 | 2.98e-01 | 98.3% | 53.3% |
| 4174422 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.54 | 43.0 | 3.40e-01 | 91.4% | 44.6% |
| 3918252 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 33.0 | 3.70e-01 | 75.9% | 86.0% |
| 3999814 | 3131.1.1.1 ↗ | a+b two layers › FYR domain › FYR domain › FYR domain › FYRN,FYRC | 0.53 | 40.0 | 2.93e-01 | 84.5% | 56.6% |
| 3269422 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.53 | 40.0 | 2.74e-01 | 91.4% | 28.1% |
| 4946458 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 39.0 | 3.10e-01 | 82.8% | 63.0% |
| 5064976 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 36.0 | 2.71e-01 | 74.1% | 81.2% |
| 3715091 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.52 | 35.0 | 3.47e-01 | 72.4% | 75.4% |
| 5017735 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.52 | 43.0 | 3.59e-01 | 94.8% | 78.2% |
| 4058117 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.52 | 39.0 | 3.16e-01 | 89.7% | 47.9% |
| 3914514 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.51 | 37.0 | 2.40e-01 | 81.0% | 15.8% |
| 4979564 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.51 | 36.0 | 3.51e-01 | 79.3% | 71.4% |
| 4204975 | 12.3.1.14 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Hepar_II_III | 0.51 | 36.0 | 2.31e-01 | 77.6% | 26.5% |
| 4858751 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.50 | 41.0 | 3.29e-01 | 96.6% | 87.5% |
D3
medium
residues 53-121
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 44.0 | 4.30e-01 | 89.9% | 95.0% |
| 1yfmA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.56 | 39.0 | 3.30e-01 | 75.4% | 97.6% |
| 5cvrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 3.81e-01 | 84.1% | 89.3% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 38.0 | 3.64e-01 | 79.7% | 95.3% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5019249 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 40.0 | 3.83e-01 | 72.5% | 98.8% |
| 3971692 | 5060.2.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain | 0.58 | 45.0 | 3.84e-01 | 88.4% | 77.6% |
| 3484511 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.55 | 42.0 | 3.64e-01 | 88.4% | 82.5% |
| 4990527 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.54 | 37.0 | 3.10e-01 | 71.0% | 51.7% |
| 3245242 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 43.0 | 2.73e-01 | 100.0% | 54.0% |
D4
medium
residues 183-237
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4yn3B00 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.80 | 63.0 | 5.92e-01 | 83.6% | 93.8% |
| 2z30B00 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.80 | 56.0 | 5.32e-01 | 74.5% | 93.8% |
| 2wcyA01 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.69 | 49.0 | 4.44e-01 | 83.6% | 54.7% |
| 4avrA00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.67 | 48.0 | 4.08e-01 | 78.2% | 79.8% |
| 5yv7A00 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.65 | 42.0 | 4.12e-01 | 80.0% | 60.0% |
| 5chtB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.65 | 49.0 | 3.07e-01 | 81.8% | 34.0% |
| 2zkmX01 | 2.30.29.240 | Mainly Beta › Roll › PH-domain like › | 0.64 | 50.0 | 3.35e-01 | 83.6% | 51.0% |
| 8h68A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.63 | 47.0 | 3.15e-01 | 81.8% | 70.9% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 42.0 | 3.97e-01 | 74.5% | 57.6% |
| 3m7aA01 | 2.60.120.1140 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF192 | 0.62 | 45.0 | 3.57e-01 | 85.5% | 95.6% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.61 | 47.0 | 4.55e-01 | 98.2% | 74.2% |
| 5cvmA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 45.0 | 2.85e-01 | 81.8% | 45.5% |
| 7ctpA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 41.0 | 3.30e-01 | 76.4% | 83.3% |
| 3u2sC00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.58 | 40.0 | 3.51e-01 | 72.7% | 96.7% |
| 1faoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 44.0 | 3.73e-01 | 85.5% | 82.0% |
| 1aw8B00 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.57 | 46.0 | 3.94e-01 | 89.1% | 59.3% |
| 1f94A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.57 | 46.0 | 4.48e-01 | 94.5% | 98.4% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 45.0 | 3.53e-01 | 94.5% | 82.5% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 37.0 | 3.60e-01 | 74.5% | 55.4% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.57 | 42.0 | 2.64e-01 | 83.6% | 89.9% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 38.0 | 3.51e-01 | 72.7% | 57.3% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 37.0 | 3.57e-01 | 74.5% | 60.3% |
| 1ltlA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.55 | 42.0 | 4.46e-01 | 94.5% | 95.9% |
| 3wa1A01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 46.0 | 3.39e-01 | 100.0% | 66.3% |
| 3r5lA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 46.0 | 3.59e-01 | 92.7% | 54.3% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 43.0 | 3.63e-01 | 94.5% | 70.5% |
| 4ntqB00 | 3.30.2450.20 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.54 | 39.0 | 2.98e-01 | 81.8% | 91.0% |
| 4rr5A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.53 | 42.0 | 4.08e-01 | 92.7% | 100.0% |
| 1bikA00 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.53 | 40.0 | 3.24e-01 | 83.6% | 74.5% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 36.0 | 3.54e-01 | 72.7% | 98.3% |
| 2k2jA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 38.0 | 3.16e-01 | 83.6% | 78.6% |
| 2ed8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 43.0 | 3.81e-01 | 96.4% | 67.4% |
| 8bs9A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 42.0 | 2.72e-01 | 94.5% | 59.7% |
| 2az4A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 39.0 | 2.57e-01 | 87.3% | 21.0% |
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.51 | 43.0 | 3.72e-01 | 100.0% | 84.8% |
| 4ktbA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 42.0 | 3.14e-01 | 100.0% | 82.5% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.51 | 39.0 | 4.01e-01 | 98.2% | 94.0% |
| 3zq4A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.50 | 36.0 | 2.41e-01 | 83.6% | 34.9% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5068622 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.94 | 67.0 | 6.50e-01 | 74.5% | 100.0% |
| 3683409 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.88 | 65.0 | 5.67e-01 | 78.2% | 98.8% |
| 3320361 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.87 | 64.0 | 5.39e-01 | 76.4% | 89.4% |
| 3441043 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.87 | 63.0 | 5.06e-01 | 76.4% | 98.0% |
| 3299222 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.85 | 61.0 | 6.74e-01 | 74.5% | 97.7% |
| 3431230 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.85 | 66.0 | 5.35e-01 | 81.8% | 96.8% |
| 3426909 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.83 | 59.0 | 4.94e-01 | 74.5% | 97.8% |
| 3646675 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.83 | 63.0 | 5.43e-01 | 81.8% | 96.5% |
| 4990345 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 53.0 | 5.59e-01 | 74.5% | 100.0% |
| 4104229 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.72 | 65.0 | 5.20e-01 | 96.4% | 89.0% |
| 5039893 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.71 | 62.0 | 5.56e-01 | 94.5% | 88.0% |
| 3883258 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.71 | 60.0 | 5.44e-01 | 94.5% | 98.6% |
| 3878052 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.71 | 60.0 | 5.24e-01 | 96.4% | 83.5% |
| 3439023 | 304.7.1.11 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › MORF_dom | 0.71 | 63.0 | 4.95e-01 | 98.2% | 84.5% |
| 3352501 | 304.7.1.11 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › MORF_dom | 0.69 | 61.0 | 4.74e-01 | 100.0% | 80.0% |
| 4098530 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.68 | 53.0 | 3.65e-01 | 89.1% | 38.5% |
| 4157992 | 4042.1.1.0 ↗ | a+b complex topology › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase | 0.67 | 54.0 | 4.08e-01 | 89.1% | 58.5% |
| 4958689 | 821.1.1.14 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 | 0.67 | 52.0 | 5.15e-01 | 87.3% | 95.0% |
| 5032187 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 46.0 | 4.68e-01 | 72.7% | 100.0% |
| 3289607 | 2004.1.1.36 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N | 0.66 | 48.0 | 3.16e-01 | 94.5% | 18.3% |
| 4979507 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.64 | 49.0 | 3.63e-01 | 85.5% | 38.9% |
| 3917008 | 382.1.1.2 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP | 0.64 | 53.0 | 4.79e-01 | 96.4% | 90.0% |
| 3519690 | 11.1.5.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PF31151 | 0.61 | 49.0 | 3.67e-01 | 90.9% | 68.3% |
| 4151900 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.61 | 46.0 | 3.51e-01 | 85.5% | 41.7% |
| 5027350 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.61 | 48.0 | 3.69e-01 | 90.9% | 54.3% |
| 4928555 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.61 | 49.0 | 3.92e-01 | 94.5% | 62.9% |
| 3340123 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.61 | 46.0 | 4.00e-01 | 85.5% | 54.4% |
| 5049794 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.59 | 50.0 | 3.72e-01 | 96.4% | 41.4% |
| 5079541 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.59 | 41.0 | 3.04e-01 | 74.5% | 74.4% |
| 3504586 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.58 | 45.0 | 3.40e-01 | 90.9% | 37.4% |
| 3948387 | 1104.1.1.1 ↗ | a+b complex topology › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › DUF927 | 0.57 | 46.0 | 3.53e-01 | 96.4% | 66.7% |
| 4928621 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.56 | 46.0 | 3.58e-01 | 98.2% | 43.6% |
| 3492427 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.56 | 41.0 | 3.80e-01 | 81.8% | 65.3% |
| 3256398 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 47.0 | 3.95e-01 | 96.4% | 58.9% |
| 3897370 | 3346.1.1.5 ↗ | a+b two layers › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › ODR4-like | 0.55 | 39.0 | 2.83e-01 | 81.8% | 48.8% |
| 5034902 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.54 | 43.0 | 3.33e-01 | 94.5% | 42.8% |
| 4004207 | 11.1.4.76 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO_5th | 0.54 | 41.0 | 3.69e-01 | 96.4% | 57.5% |
| 3236126 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.54 | 43.0 | 3.34e-01 | 89.1% | 73.6% |
| 3349141 | 375.1.1.182 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7086 | 0.54 | 43.0 | 3.21e-01 | 89.1% | 60.0% |
| 4940383 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 44.0 | 3.27e-01 | 94.5% | 94.2% |
| 5064080 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.53 | 40.0 | 2.64e-01 | 87.3% | 19.4% |
| 3228051 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.53 | 38.0 | 3.62e-01 | 78.2% | 98.5% |
| 3891540 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 42.0 | 3.77e-01 | 94.5% | 90.6% |
| 4200883 | 247.1.1.18 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL,Lactamase_B_2 | 0.52 | 39.0 | 2.55e-01 | 87.3% | 18.7% |
| 3056322 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.52 | 41.0 | 3.51e-01 | 100.0% | 74.5% |
| 3951102 | 247.1.1.45 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, RMMBL, Lactamase_B_2 | 0.51 | 39.0 | 2.51e-01 | 87.3% | 19.0% |