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NC_031927.1__YP_009322969.1__BOW86_gp036__00036

Bact-Vir

NC_031927.1__YP_009322969.1__BOW86_gp036__00036

Identity

Accession:
NC_031927 ↗
Kingdom:
phage

Quality

87.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Mazuvirus› Synechococcus_phage_S-CAM7

TaxID: 1883368

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-77
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.74 66.0 5.86e-01 100.0% 84.6%
1n2bB02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.68 60.0 5.32e-01 97.3% 84.6%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.66 39.0 4.68e-01 91.8% 89.6%
4ak2A01 2.60.40.2720 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 54.0 4.64e-01 91.8% 94.9%
1ko2A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.59 49.0 3.50e-01 93.2% 72.6%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.59 44.0 3.01e-01 80.8% 24.8%
3qkgA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 44.0 3.38e-01 79.5% 60.4%
3u0aA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.58 50.0 3.46e-01 95.9% 30.9%
3rd7A00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.58 50.0 3.44e-01 98.6% 80.4%
8d7eC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 42.0 4.00e-01 75.3% 100.0%
3fn9C04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 45.0 4.14e-01 82.2% 88.0%
5swiD01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 45.0 3.16e-01 86.3% 48.8%
1zkiA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 48.0 4.14e-01 100.0% 69.6%
1bf5A02 2.60.40.630 Mainly Beta › Sandwich › Immunoglobulin-like › STAT transcription factor, DNA-binding domain 0.56 42.0 3.45e-01 82.2% 97.2%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.56 43.0 3.42e-01 83.6% 45.5%
4rmmA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 47.0 3.90e-01 95.9% 64.4%
1c8uA02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 47.0 4.12e-01 97.3% 69.6%
3cjyA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.55 48.0 3.34e-01 98.6% 81.8%
4mb4A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 48.0 4.73e-01 100.0% 97.5%
1gyvA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.54 42.0 3.56e-01 83.6% 85.8%
7jrmA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 41.0 4.09e-01 82.2% 94.6%
3bbjA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.54 46.0 3.20e-01 98.6% 80.5%
4ydzA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 43.0 3.58e-01 91.8% 51.9%
5byuA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 44.0 3.79e-01 100.0% 80.5%
1h4uA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.52 42.0 3.00e-01 93.2% 79.6%
3hm0A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 42.0 3.67e-01 98.6% 85.7%
1njkA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 42.0 3.55e-01 97.3% 69.9%
1zc0A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 38.0 2.65e-01 86.3% 37.4%
2hx5A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 40.0 3.34e-01 93.2% 70.6%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4176400 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.78 67.0 6.70e-01 94.5% 100.0%
4507935 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.67 38.0 3.21e-01 90.4% 33.3%
5060010 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.67 36.0 4.34e-01 87.7% 82.2%
3266713 3264.1.1.0 ↗ 0.64 48.0 3.82e-01 80.8% 49.3%
4268461 274.1.1.5 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor 0.63 58.0 5.49e-01 100.0% 94.1%
4014375 3256.1.1.0 ↗ a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.63 35.0 4.11e-01 83.6% 80.0%
5056110 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.62 55.0 4.53e-01 100.0% 61.5%
5053568 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 44.0 3.65e-01 78.1% 81.5%
5047757 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 43.0 3.87e-01 83.6% 65.5%
3928894 241.2.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.57 48.0 3.44e-01 90.4% 43.9%
3343085 331.3.1.5 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.57 41.0 3.20e-01 76.7% 41.2%
4027391 10.1.1.114 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF29973 0.57 41.0 3.60e-01 75.3% 59.0%
3940678 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.57 47.0 4.41e-01 97.3% 73.7%
4026443 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.57 46.0 3.65e-01 90.4% 98.1%
1833198 11.1.1.102 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M_BRD 0.56 48.0 4.34e-01 97.3% 92.2%
4272864 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.55 40.0 3.36e-01 93.2% 45.8%
3827488 319.1.1.15 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF27746 0.55 40.0 3.52e-01 76.7% 54.5%
4935679 3414.1.1.13 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.55 38.0 3.57e-01 72.6% 92.2%
1397993 222.1.1.10 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.54 47.0 4.16e-01 100.0% 72.3%
5018457 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 37.0 3.84e-01 71.2% 82.9%
3497120 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 36.0 3.30e-01 76.7% 52.6%
3476559 5.1.13.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain of DCAF15 › DCAF15_WD40 0.54 41.0 2.61e-01 80.8% 22.3%
3173378 109.4.1.338 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIC1 0.53 42.0 3.01e-01 93.2% 26.5%
3384933 3012.1.1.0 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.53 39.0 3.71e-01 80.8% 97.8%
3736741 222.1.1.10 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.52 38.0 3.69e-01 76.7% 81.2%
3960325 222.1.1.10 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.52 44.0 3.90e-01 97.3% 72.7%
4932472 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 36.0 3.42e-01 76.7% 60.0%
4859328 271.1.1.1 ↗ beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.51 37.0 3.09e-01 78.1% 72.1%
3288884 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 34.0 3.05e-01 86.3% 48.6%
3629240 719.1.1.2 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.51 36.0 3.21e-01 93.2% 50.0%
3181024 719.1.1.2 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.51 43.0 3.57e-01 93.2% 55.4%
3749631 4.1.1.14 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.50 38.0 3.34e-01 79.5% 70.5%
4994697 4010.1.1.0 ↗ a+b complex topology › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase 0.50 40.0 2.62e-01 86.3% 77.8%
D2 high residues 82-150
PDB
Domain cluster: representative