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NC_031927.1__YP_009323026.1__BOW86_gp093__00093
Bact-VirNC_031927.1__YP_009323026.1__BOW86_gp093__00093
Identity
- Accession:
- NC_031927 ↗
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Mazuvirus›
Synechococcus_phage_S-CAM7
TaxID: 1883368
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-62
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oyhA00 | 1.20.5.50 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.72 | 60.0 | 5.84e-01 | 89.7% | 82.8% |
| 3r0qA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.71 | 55.0 | 3.78e-01 | 93.1% | 24.0% |
| 2xzmO02 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.70 | 49.0 | 4.61e-01 | 72.4% | 60.0% |
| 2hydA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.70 | 56.0 | 3.50e-01 | 89.7% | 34.1% |
| 1nt2B02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.69 | 54.0 | 5.16e-01 | 84.5% | 73.1% |
| 3natA01 | 3.40.50.11250 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 | 0.67 | 48.0 | 3.58e-01 | 98.3% | 29.9% |
| 2aj6A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.66 | 50.0 | 3.97e-01 | 82.8% | 41.7% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.66 | 49.0 | 4.84e-01 | 89.7% | 75.0% |
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.64 | 56.0 | 5.32e-01 | 98.3% | 80.9% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 53.0 | 4.32e-01 | 93.1% | 82.6% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.61 | 56.0 | 5.08e-01 | 100.0% | 78.7% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 50.0 | 4.36e-01 | 100.0% | 67.0% |
| 1p2xA00 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.53 | 45.0 | 3.39e-01 | 100.0% | 78.6% |
| 4nphA02 | 1.20.1270.330 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.52 | 42.0 | 3.95e-01 | 91.4% | 100.0% |
| 3fhfA01 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.52 | 39.0 | 3.21e-01 | 84.5% | 45.2% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5028327 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.75 | 59.0 | 4.04e-01 | 84.5% | 28.2% |
| 3554386 | 3755.3.1.309 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Mis12 | 0.70 | 56.0 | 4.69e-01 | 96.6% | 51.0% |
| 3635635 | 3826.1.1.26 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › RRP36 | 0.70 | 59.0 | 4.49e-01 | 100.0% | 39.6% |
| 4186957 | 192.29.1.164 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › RRP36 | 0.69 | 58.0 | 4.73e-01 | 100.0% | 49.6% |
| 4118017 | 4336.2.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 › EnY2 | 0.69 | 57.0 | 4.79e-01 | 98.3% | 54.0% |
| 3193726 | 101.1.2.267 ↗ | alpha arrays › HTH › HTH › winged helix domain › Nse4_C | 0.67 | 59.0 | 4.41e-01 | 100.0% | 98.6% |
| 3401272 | 174.1.1.29 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF4728 | 0.65 | 54.0 | 3.84e-01 | 91.4% | 36.5% |
| 2724319 | 3747.1.1.1 ↗ | a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bb_rod | 0.65 | 51.0 | 5.23e-01 | 94.8% | 92.6% |
| 4951651 | 5042.1.1.1 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA | 0.64 | 53.0 | 5.14e-01 | 96.6% | 83.8% |
| 3354816 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.64 | 52.0 | 5.02e-01 | 89.7% | 83.1% |
| 3336946 | 192.1.1.14 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › MPH2 | 0.63 | 45.0 | 4.55e-01 | 79.3% | 75.0% |
| 3510680 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.63 | 52.0 | 4.89e-01 | 89.7% | 82.9% |
| 3774553 | 223.2.1.22 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Folliculin | 0.62 | 55.0 | 3.51e-01 | 96.6% | 23.8% |
| 3507860 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 51.0 | 4.20e-01 | 94.8% | 92.4% |