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NC_031927.1__YP_009323177.1__BOW86_gp213__00244

Bact-Vir

NC_031927.1__YP_009323177.1__BOW86_gp213__00244

Identity

Accession:
NC_031927 ↗
Kingdom:
phage

Quality

91.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Mazuvirus› Synechococcus_phage_S-CAM7

TaxID: 1883368

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-55
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 61.0 5.00e-01 98.1% 67.7%
1yg2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 58.0 5.17e-01 100.0% 74.7%
2zg6A02 1.10.150.660 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.66 57.0 5.21e-01 100.0% 72.2%
3smvA02 1.10.150.750 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.61 51.0 4.61e-01 100.0% 76.6%
3jyhA02 1.20.120.980 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine carboxypeptidase S28, SKS domain 0.60 51.0 3.77e-01 100.0% 64.4%
4ociA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 43.0 4.12e-01 98.1% 66.7%
7e84A03 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 46.0 3.54e-01 86.8% 73.2%
1y1xB00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 48.0 3.42e-01 100.0% 33.3%
7tvyA01 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.55 46.0 3.68e-01 100.0% 52.6%
1dzfA01 3.40.1340.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna-directed Rna Polymerases I, Ii, And Iii 27 Kd Polypeptide; Chain: A; domain 1 › RNA polymerase, Rpb5, N-terminal domain 0.54 44.0 3.41e-01 98.1% 47.1%
7egfc01 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.54 44.0 3.91e-01 100.0% 97.7%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3386264 2004.1.1.195 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C 0.80 57.0 3.36e-01 73.6% 11.5%
3286228 7581.1.1.2 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › ketoacyl-synt 0.76 54.0 3.41e-01 75.5% 29.6%
3575456 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.72 51.0 4.28e-01 92.5% 44.4%
3689543 3922.1.1.227 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF6594 0.70 48.0 4.06e-01 71.7% 51.8%
3613282 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.67 55.0 4.15e-01 98.1% 36.6%
5062338 3714.1.1.0 ↗ a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain 0.67 45.0 3.83e-01 71.7% 44.4%
4044019 108.1.1.171 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_8, CAPN13-like_C_EFh 0.66 55.0 4.08e-01 98.1% 36.0%
3942142 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.66 45.0 2.93e-01 71.7% 18.4%
4230646 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 54.0 4.60e-01 100.0% 56.5%
3965844 589.1.1.2 ↗ alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N_3 0.66 55.0 3.96e-01 96.2% 61.9%
3939230 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.63 57.0 4.92e-01 100.0% 72.5%
2324002 1184.1.1.0 ↗ 0.63 56.0 4.33e-01 100.0% 62.7%
3828041 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.63 54.0 4.42e-01 98.1% 57.0%
5081088 101.1.2.932 ↗ alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.63 52.0 4.51e-01 92.5% 61.4%
5002796 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 51.0 4.77e-01 100.0% 73.8%
4108698 103.1.1.83 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › DUF2603 0.60 48.0 4.51e-01 100.0% 71.4%
4027768 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 49.0 3.79e-01 100.0% 63.0%
4640273 142.1.1.33 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › DUF2603 0.59 49.0 4.40e-01 98.1% 66.7%
3686440 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.57 49.0 4.28e-01 96.2% 87.5%
5059555 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.56 44.0 2.74e-01 96.2% 41.1%
3224294 5050.1.1.32 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn 0.55 44.0 2.57e-01 90.6% 34.1%
4001683 109.4.1.1504 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26103 0.55 43.0 2.50e-01 84.9% 10.1%
3617288 5.1.4.254 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N 0.54 42.0 2.68e-01 94.3% 95.7%
3173844 101.1.15.0 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.53 44.0 3.89e-01 100.0% 61.4%
3752445 102.1.1.143 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › XTBD 0.52 37.0 3.52e-01 98.1% 61.8%