←Back to structures

NC_031938.1__YP_009324544.1__BOW78_gp21__00021

Bact-Vir

NC_031938.1__YP_009324544.1__BOW78_gp21__00021

Identity

Accession:
NC_031938 ↗
Kingdom:
phage

Quality

91.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Flavobacterium_phage_Fpv6

TaxID: 1814286

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-218
PDB
Domain cluster: rep: OP172819.1__WAX17128.1__PF672P1_00070__00070__D60-209
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3syyA00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.88 56.0 5.48e-01 98.4% 60.3%
3sm4A00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.86 55.0 5.11e-01 98.9% 53.3%
3k93A00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.76 58.0 5.36e-01 98.9% 63.7%
3n2qA02 3.30.300.190 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.55 33.0 4.03e-01 87.5% 94.0%
3s1sA01 3.90.1570.30 Alpha Beta › Alpha-Beta Complex › tt1808, chain A › 0.53 43.0 4.46e-01 98.4% 91.7%
1wu7A03 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.51 26.0 3.37e-01 95.7% 87.6%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
148043 2008.1.1.50 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ 0.88 56.0 5.52e-01 98.4% 61.3%
424674 2008.1.1.50 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ 0.85 55.0 5.06e-01 98.9% 52.4%
3614372 2008.1.1.50 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ 0.82 53.0 4.64e-01 98.9% 46.2%
3647811 2008.1.1.50 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ 0.81 52.0 4.62e-01 99.5% 47.6%
4928680 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.80 43.0 4.29e-01 100.0% 51.1%
4955137 2008.1.1.4 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 0.78 46.0 4.66e-01 98.9% 59.4%
136966 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.76 58.0 5.36e-01 98.9% 63.7%
5061641 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.72 33.0 4.89e-01 92.9% 96.5%
5042118 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.71 41.0 4.48e-01 97.8% 67.1%
5060677 2008.1.1.114 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF4143 0.70 37.0 4.75e-01 97.8% 87.6%
4959588 2008.1.1.100 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N_2 0.67 40.0 4.25e-01 96.7% 65.5%
4995692 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.67 40.0 4.71e-01 96.7% 83.8%
5062060 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.66 35.0 4.79e-01 93.5% 100.0%
5005253 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.65 40.0 4.28e-01 70.1% 70.6%
2491448 2008.1.1.50 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ 0.63 59.0 4.49e-01 98.9% 56.2%
4955169 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 35.0 4.61e-01 92.4% 100.0%
5014169 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 36.0 4.31e-01 95.1% 83.7%
4033074 2008.1.1.83 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF1064 0.62 39.0 4.59e-01 94.0% 89.1%
5019936 2008.1.1.162 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF30170 0.61 39.0 4.23e-01 97.3% 76.0%
4969468 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.61 38.0 4.25e-01 95.1% 77.9%
5014346 2008.1.1.114 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF4143 0.61 34.0 4.51e-01 91.8% 100.0%
2715553 2008.1.1.34 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Card1_endonuc 0.61 39.0 4.84e-01 91.3% 100.0%
4029985 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.60 38.0 4.58e-01 92.9% 97.5%
5066100 2008.1.1.59 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 0.56 42.0 3.91e-01 100.0% 60.9%
4583141 2008.1.1.134 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › XhoI 0.56 41.0 4.25e-01 98.4% 81.2%
3786350 101.1.17.0 ↗ alpha arrays › HTH › HTH › FF domain 0.55 29.0 3.84e-01 73.4% 93.0%
4934246 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.55 33.0 3.89e-01 90.2% 83.8%
3932439 2008.1.1.18 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › eIF-3_zeta 0.55 50.0 3.91e-01 100.0% 47.9%
185517 2008.1.1.64 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › BpuSI_N 0.53 43.0 4.47e-01 98.4% 92.3%
5032419 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.52 45.0 4.39e-01 98.9% 82.4%